KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:54 2014 Check: 00 .. Name: ENSBTAP00000038692/1-362 Len: 427 Check: 6013 Weight: 1.00 Name: ENSP00000354588/1-426 Len: 427 Check: 3718 Weight: 1.00 Name: ENSTTRP00000006270/1-426 Len: 427 Check: 3778 Weight: 1.00 Name: bmy_12785T0/1-267 Len: 427 Check: 519 Weight: 1.00 Name: BACU004173/1-405 Len: 427 Check: 776 Weight: 1.00 // 1 50 ENSBTAP00000038692/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000354588/1-426 IEPSSWSGSE SPAENMERMS DSADKPIDND AEGVWSPDIE QSFQEALAIY ENSTTRP00000006270/1-426 IEPSSWSGSE SPAENMERMS DSADKPIDND AEGVWSPDIE QSFQEALAIY bmy_12785T0/1-267 ---------- ---------- ---------- ---------- ---------- BACU004173/1-405 ---------- -----MERMS DSADKPIDND AEGVWSPDIE QSFQEALAIY 51 100 ENSBTAP00000038692/1-362 ---------- -----MYGRN ELIARYIKLR TGKTRTRKQV SSHIQVLARR ENSP00000354588/1-426 PPCGRRKIIL SDEGKMYGRN ELIARYIKLR TGKTRTRKQV SSHIQVLARR ENSTTRP00000006270/1-426 PPCGRRKIIL SDEGKMYGRN ELIARYIKLR TGKTRTRKQV SSHIQVLARR bmy_12785T0/1-267 ---------- ---------- ---------- ---------- ---------- BACU004173/1-405 PPCGRRKIIL SDEGKMYGRN ELIARYIRLR TGKTRTRK-- ----QVLARR 101 150 ENSBTAP00000038692/1-362 KSRDFHSKLK DQTAKDKALQ HMAAMSSAQI VSATAIHNKL GLPGIPRPTF ENSP00000354588/1-426 KSRDFHSKLK DQTAKDKALQ HMAAMSSAQI VSATAIHNKL GLPGIPRPTF ENSTTRP00000006270/1-426 KSRDFHSKLK DQTAKDKALQ HMAAMSSAQI VSATAIHNKL GLPGIPRPTF bmy_12785T0/1-267 ---------- ---------- ---------- ---------- ---------- BACU004173/1-405 KSCDFHSKLK DQTAKDKALQ HMAAMSSAQI ESATAIHSQL GLPGIPRPTF 151 200 ENSBTAP00000038692/1-362 PGAPGFWPGM IQTGQPGSSQ DVKPFVQQAY PIQPAVTAPI PGFEPASAPA ENSP00000354588/1-426 PGAPGFWPGM IQTGQPGSSQ DVKPFVQQAY PIQPAVTAPI PGFEPASAPA ENSTTRP00000006270/1-426 PGAPGFWPGM IQTGQPGSSQ DVKPFVQQAY PIQPAVTAPI PGFEPASAPA bmy_12785T0/1-267 ---------M IQTRQPGSSQ DVKPFVQQAY PIQPAVTAPI PGFEPASAPA BACU004173/1-405 PGAPGFWPGM IQTGQPGSSQ DVKPFVQQAY PIQPALTAPI PGFEPASAPA 201 250 ENSBTAP00000038692/1-362 PSVPAWQGRS IGTTKLRLVE FSAFLEQQRD PDSYNKHLFV HIGHANHSYS ENSP00000354588/1-426 PSVPAWQGRS IGTTKLRLVE FSAFLEQQRD PDSYNKHLFV HIGHANHSYS ENSTTRP00000006270/1-426 PSVPAWQGRS IGTTKLRLVE FSAFLEQQRD PDSYNKHLFV HIGHANHSYS bmy_12785T0/1-267 PSVPAWQGRS IGTTKLLLVE FSVFLEQRRD PDWYNKHLFV HIGHANHYYS BACU004173/1-405 PSVPAWQGRS IGTTKLRLVE FSAFLERRRD PDWYNKHLFV HTGHANHYYS 251 300 ENSBTAP00000038692/1-362 DPLLESVDIR QIYDKFPEKK GGLKELFGKG PQNAFFLVKF WADLNCNIQD ENSP00000354588/1-426 DPLLESVDIR QIYDKFPEKK GGLKELFGKG PQNAFFLVKF WADLNCNIQD ENSTTRP00000006270/1-426 DPLLESVDIR QIYDKFPEKK GGLKELFGKG PQNAFFLVKF WADLNCSIQD bmy_12785T0/1-267 DPLLESVDIR QIYDKFPEKK AGLKELFGKG PQNAFFLVKF WADLNCSIQD BACU004173/1-405 DPLLLSVDIR QIYDKFPEKK AGLKELFGKG PQNAFFLIKF WADLNCSIQD 301 350 ENSBTAP00000038692/1-362 DAGAFYGVTS QYESSENMTV TCSTKVCSFG KQVVEKVETE YARFENGRFV ENSP00000354588/1-426 DAGAFYGVTS QYESSENMTV TCSTKVCSFG KQVVEKVETE YARFENGRFV ENSTTRP00000006270/1-426 DAGAFYGVTS QYESSENMTV TCSTKVCSFG KQVVEKVETE YARFENGRFV bmy_12785T0/1-267 DVGAFYGVTS QYESSENMTV TCSTKVCSIG KQAVEKVETE YARFENGRFV BACU004173/1-405 DVGAFYGVTS QYESSENMTV TCSTKVCSFG KQAVEKVETE YARFENGRFV 351 400 ENSBTAP00000038692/1-362 YRINRSPMCE YMINFIHKLK HLPEKYMMNS VLENFTILLQ VVTNRDTQET ENSP00000354588/1-426 YRINRSPMCE YMINFIHKLK HLPEKYMMNS VLENFTILL- VVTNRDTQET ENSTTRP00000006270/1-426 YRINRSPMCE YMINFIHKLK HLPEKYMMNS VLENFTILL- VVTNRDTQET bmy_12785T0/1-267 YRINRSPTCE YMINFIHKLK HLPEKYMMNS VLENFTILL- VVTNRDTQET BACU004173/1-405 YRINRSPTCE YMISFIHKLK HLPEKYMMNS VLENFTILL- VVTNRDTQET 401 450 ENSBTAP00000038692/1-362 LLCMACVFEV SNSEHGAQHH IYRLVKD ENSP00000354588/1-426 LLCMACVFEV SNSEHGAQHH IYRLVKD ENSTTRP00000006270/1-426 LLCMACVFEV SNSEHGAQHH IYRLVKD bmy_12785T0/1-267 LLCMACVFEV SNSEHGAQHH IYRLVKD BACU004173/1-405 LLCMACVFEV SNSEHGAQHH IYRLVKD