KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:14 2014 Check: 00 .. Name: ENSP00000388910/1-964 Len: 1021 Check: 7097 Weight: 1.00 Name: bmy_16954T0/1-902 Len: 1021 Check: 5739 Weight: 1.00 Name: BACU008680/1-927 Len: 1021 Check: 7962 Weight: 1.00 Name: ENSBTAP00000038958/1-704 Len: 1021 Check: 1224 Weight: 1.00 Name: ENSTTRP00000008192/1-746 Len: 1021 Check: 7705 Weight: 1.00 // 1 50 ENSP00000388910/1-964 MITTLPSLLP ASLASISHRV TNLPSNSLSH NPGLSKPDFP GNSSPGLPSS bmy_16954T0/1-902 ---------- ---------- ---------- ---------- ---------- BACU008680/1-927 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038958/1-704 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008192/1-746 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000388910/1-964 SSPGRDLGAP AGSMGAASCE DEELEFKLVF GEEKEAPPLG AGGLGEELDS bmy_16954T0/1-902 ---------- ---MGAASCE DEELEFKLVF GEEKEAPPLG AGGSGEELDS BACU008680/1-927 ---------- ---MGAASCE DEELEFKLVF GEEKEAPPLG AGGSGEELDS ENSBTAP00000038958/1-704 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008192/1-746 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000388910/1-964 EDAPPCCRLA LGEPPPYGAA PIGIPRPPPP RPGMHSPPPR PAPSPGTWES bmy_16954T0/1-902 EDTPPCCRLG LGDPPPYGAA PIGIPRPPPP RPGMHSPPPR PAPSPGTWES BACU008680/1-927 EDTPPCCRLG LGEPPPYGAA PIGIPRPPPP RPGMLSPPPR PAPSPGTWES ENSBTAP00000038958/1-704 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008192/1-746 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000388910/1-964 QPARSVRLGG PGGGAGGAGG GRVLECPSIR ITSISPTPEP PAALEDNPDA bmy_16954T0/1-902 QPAR------ ---------- --------IR ITSISPTPDP PAALEDNPDA BACU008680/1-927 QPARSVRLGG PGGGSGGAGG GRVLECPSIR ITSISPTPDP PAALEDNPDA ENSBTAP00000038958/1-704 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008192/1-746 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000388910/1-964 WGDGSPRDYP PPEGFGGYRE AGGQGGGAFF SPSPGSSSLS SWSFFSDASD bmy_16954T0/1-902 WGEGSPRDYP PPEGFGGYRE AGGQGGGPFF SPSPGSSSLS SWSFFSDASD BACU008680/1-927 WGEGSPRDYP PPEGFGGYRE AGGLGGGPFF SPSPGSSSLS SWSFFSDASD ENSBTAP00000038958/1-704 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008192/1-746 ---------- --EGFGGYRG GGGQGGG-FI SPS-GSSSLS SWSFFSDASD 251 300 ENSP00000388910/1-964 EAALYAACDE VESELNEAAS RFGLGSPLPS PRASPRPWTP EDPWSLYGPS bmy_16954T0/1-902 EAALYAACDE VESELNEAAS RFGLGSPLPS PRASPRPWTP DDPWSLYGPS BACU008680/1-927 EAALYAACDE VESELNEAAS RFGLGSPLPS PRASPRPWTP DDPWSLYGPS ENSBTAP00000038958/1-704 ---------- VESELNEAAS RFGLGSPLPS PRASPRPWTP DDPWSLYGPS ENSTTRP00000008192/1-746 EA--YAACDE VESELNEAAS R-GLGSPLPS PRASPRPWTP DDPWSLYGPS 301 350 ENSP00000388910/1-964 PGGRGPEDSW LLLSAPGPTP ASPRPASPCG KRRYSSSGTP SSASPALSRR bmy_16954T0/1-902 PGGRGPEDSW LLLSAPGPTP ASPRPASPCG KRRYSSSGTP SSASPALSRR BACU008680/1-927 PGGRGPEDSW LLLSAPGPTP ASPRPASPCG KRRYSSSGTP SSASPALSRR ENSBTAP00000038958/1-704 PGGRGPEDSW LLLSAPGPTP ASPRPASPCG KRRYSSSGTP SSASPALSRR ENSTTRP00000008192/1-746 PGGRGPEDSW LLLSAPGPTP ASPRPASPCG KRRYSSSGTP SSASPALSRR 351 400 ENSP00000388910/1-964 GSLGEEGSEP PPPPPLPLAR DPGSPGPFDY VGAPPAESIP QKTRRTSSEQ bmy_16954T0/1-902 GSLGEEGPEP PPPPPLPLVR DPGSPGPFDY AGAPPAESIP QKTRRTSSEQ BACU008680/1-927 GSLGEEGPEP PPPPPLPLVR DPGSPGPFDY AGAPPAESIP QKTRRTSSEQ ENSBTAP00000038958/1-704 GSLGEEGPEP PPPPPLPLVR DPGSPGPFDY VGAPSAESIP QKTRRTSSEQ ENSTTRP00000008192/1-746 GSLGEEGPEP PPAPPLPLVR DPGSPGPFDY TGAPPAESIP QKTRRTSSEQ 401 450 ENSP00000388910/1-964 AVALPRSEEP ASCNGKLPLG AEESVAPPGG SRKEVAGMDY LAVPSPLAWS bmy_16954T0/1-902 AVALPRSEEP APCNGKLPSG VEEAGAPPGG PRKEVAGMDY LAVPSPLAWS BACU008680/1-927 AVALPRSEEP APCNGKLPSG VEEAGAPPGG PRKEVAGMDY LAVPSPLAWS ENSBTAP00000038958/1-704 AVALPRSEEP APCNGKLPSG AEEAGAPPGG PRKEAAGMDY LAVPSPLAWS ENSTTRP00000008192/1-746 AVALPRSEEP APCNGKLPSG VEEAGAPPGG PRKEVAGMDY LAVPSPLAWS 451 500 ENSP00000388910/1-964 KARIGGHSPI FRTSALPPLD WPLPSQYEQL ELRIEVQPRA HHRAHYETEG bmy_16954T0/1-902 KARIGGHSPI FRTSALPPLD WPLPSQYEQL ELRIEVQPRA HHRAHYETEG BACU008680/1-927 KARIGGHSPI FRTSALPPLD WPLPSQYEQL ELRIEVQPRA HHRAHYETEG ENSBTAP00000038958/1-704 KARIGGHSPI FRTSALPPLD WPLPSQYEQL ELRIEVQPRA HHRAHYETEG ENSTTRP00000008192/1-746 KARTGGHSPI FRTSALPPLD WPLPSQYEQL ELRIEVQPRA HHRAHYETEG 501 550 ENSP00000388910/1-964 SRGAVKAAPG GHPVVK---- ---------- ---------- ---LLGYSEK bmy_16954T0/1-902 SRGAVKAAPG GHPIVK---- ---------- ---------- ---LLGYSEK BACU008680/1-927 SRGAVKAAPG GHPIVKGWTE NLGMDEGWDS GDFNWVAFAS LCQLLGYSEK ENSBTAP00000038958/1-704 SRGAVKAAPG GHPVVK---- ---------- ---------- ---LLGYSEK ENSTTRP00000008192/1-746 SRGAVKAAPG GHPIVK---- ---------- ---------- ---LLGYSEK 551 600 ENSP00000388910/1-964 PLTLQMFIGT ADERNLRPHA FYQVHRITGK MVATASYEAV VSGTKVLEMT bmy_16954T0/1-902 PLTLQMFIGT ADERNLRPHA FYQVHRITGK MVATASYEAV VSGTKVLEMT BACU008680/1-927 PLTLQMFIGT ADERNLRPHA FYQVHRITGK MVATASYEAV VSGTKVLEMT ENSBTAP00000038958/1-704 PLTLQMFIGT ADERNLRPHA FYQVHRITGK MVATASYEAV VSGTKVLEMT ENSTTRP00000008192/1-746 PLTLQMFIGT ADERNLRPHA FYQVHRITGK MVATASYEAV VSGTKVLEMT 601 650 ENSP00000388910/1-964 LLPENNMAAN IDCAGILKLR NSDIELRKGE TDIGRKNTRV RLVFRVHVPQ bmy_16954T0/1-902 LLPENNMAAN IDCAGILKLR NSDIELRKGE TDIGRKNTRV RLVFRVHVPQ BACU008680/1-927 LLPENNMAAN IDCAGILKLR NSDIELRKGE TDIGRKNTRV RLVFRVHVPQ ENSBTAP00000038958/1-704 LLPENNMAAN IDCAGILKLR NSDIELRKGE TDIGRKNTRV RLVFRVHVPQ ENSTTRP00000008192/1-746 LLPENNMAAN IDCAGILKLR NSDIELRKGE TDIGRKNTRV RLVFRVHVPQ 651 700 ENSP00000388910/1-964 GGGKVVSVQA ASVPIECSQR SAQELPQVEA YSPSACSVRG GEELVLTGSN bmy_16954T0/1-902 GSGKVISVQT ASVPIECSQR SAQELPQVEA YSPSACSVTG GEELVLTGSN BACU008680/1-927 GSGKVISVQT ASVPIECSQR SAQELPQVEA YSPSACSVTG GEELVLTGSN ENSBTAP00000038958/1-704 GSGKVVSVQT ASVPIECSQR SAQELPQVEA YSPSACSVRG GEELVLTGSN ENSTTRP00000008192/1-746 GSGKVISVQT ASVPIECSQR SA-ELPQVEA YSPSACSVTG GEELVLTGSN 701 750 ENSP00000388910/1-964 FLPDSKVVFI ERGPDGKLQW EEEATVNRLQ SNEVTLTLTV PEYSNKRVSR bmy_16954T0/1-902 FLPDSKVVFI ERGPDGKLQW EEEAAVNRSQ SNEVTLTLTI PEYSNKRVSR BACU008680/1-927 FLPDSKVVFI ERGPDGKLQW EEEATVNRSQ SNEVTLTLTI PEYSNKRVSR ENSBTAP00000038958/1-704 FLPDSKVVFI ERGPDGKLQW EEEATVNRLQ SNEVTLTLAV PEYSNKRVSR ENSTTRP00000008192/1-746 FLPDSKVVFI ERGPDGKLQW EEEATVNRLQ SNEVTLTLTI PEYSNKRVSR 751 800 ENSP00000388910/1-964 PVQVYFYVSN GRRKRSPTQS FRFLP----- ---------- ---------- bmy_16954T0/1-902 PVQVYFYVSN GRRKRSPTQS FKFLPGALWN SPWWGMRMWG PLQGHRDAVP BACU008680/1-927 PVQVYFYVSN GRRKRSPTQS FKFLP----- ---------- ---------- ENSBTAP00000038958/1-704 PVQVYFYVSN GRRKRSPTQS FKFLP----- ---------- ---------- ENSTTRP00000008192/1-746 PVQVYFYVSN GRRKRSPTQS FKFLP----- ---------- ---------- 801 850 ENSP00000388910/1-964 -VICKEEPLP DSSLRGFPSA SATPFGTDMD FSPPRPPYPS YPHEDPACET bmy_16954T0/1-902 HVIFKEEPLP DASLRGFPSA SGPHFGSDMD FSPPRPPYPS YPHEDPAYET BACU008680/1-927 -VIFKEEPLP DASLRGFPSA SGPHFGSDMD FSPPRPPYPS YPHEDPAYET ENSBTAP00000038958/1-704 -VIFKEEPLP DASLRGFPSA SGPPFGSDMD FSPPRPPYPS YPHEDPAYET ENSTTRP00000008192/1-746 -VIFKEEPLP DASLRGFPSA SGPHFGSDMD FSPPRPPYPS YPHEDPAYET 851 900 ENSP00000388910/1-964 PYLSEGFGYG MPPLYPQTGP PPSYRPGLRM FPETRGTTGC AQPPAVSFLP bmy_16954T0/1-902 PYLSEGFSYG TPPLYPQTGP PPSYRPGPRM FPETGGTTGC ARPPPVSFLP BACU008680/1-927 PYLSEGFSYG TPPLYPQTGP PPSYRPGPRM FPETGGTTGC ARPPPVSFLP ENSBTAP00000038958/1-704 PYLSEGFSYG TPPLYPQTGP PPSYRPGLRM FPETGGATGC ARPPPVSLLP ENSTTRP00000008192/1-746 PYLSEGFSYG TPPLYPQTGP PPSYRPGPRM FPETGGTTGC ARPPPVSFLP 901 950 ENSP00000388910/1-964 RPFPSDPYGG RGSSFSLGLP FSPPAPFRPP PLPASPPLEG PFPSQSDVHP bmy_16954T0/1-902 RPFPSDPYGG RGSPFPLGLP FPPPAPFR-P PLPSSPPLEG PFTPQSSVHP BACU008680/1-927 RPFPSDPYGG RGSPFPLGLP FPPPAPFR-P PLPSSPPLEG PFAPQSSVHP ENSBTAP00000038958/1-704 RPFPSDPYGG RGSPFPLGLQ FPPPSPFR-P PMPSSPPLEG PFPPQGSVHP ENSTTRP00000008192/1-746 RPFPSDPYGG RGSPFPLGLP FPPPAPFR-P PLPASPPLEG PFAPQSSVHP 951 1000 ENSP00000388910/1-964 LPAEGYNKVG PGYGPGEGAP EQEKSRGGYS SGFRDSVPIQ GITLEEG--- bmy_16954T0/1-902 PPAEGYNEVG PSYGPGEGAP EQEKSRGGYG SGFRDSVPIQ GITLEEG--- BACU008680/1-927 PPAEGYNEVG PSYGPGEGAP EQEKSRGGYG SGFRDSVPIQ GITLEEG--- ENSBTAP00000038958/1-704 PPAEGYSEVG PSYGPGEGAP EQEKSRGGYG SGFRDSVPIQ GITLEEVSEI ENSTTRP00000008192/1-746 PPAEGYSEVG PSYGPGEGAP EQEKSRGGYG GSFRDSVPIQ GITLEEVSEI 1001 1050 ENSP00000388910/1-964 -GCGTGGCEC ECVQEIALHV C bmy_16954T0/1-902 -GCGTRGCEC ECVQEIALHA C BACU008680/1-927 -GCGTRRCEC ECVQEIALHV C ENSBTAP00000038958/1-704 IGRDLSGFPA PPGEEPPA-- - ENSTTRP00000008192/1-746 IGRDLSGFPA PPGEEPPA-- -