KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:15 2014 Check: 00 .. Name: ENSTTRP00000004039/1-858 Len: 859 Check: 7446 Weight: 1.00 Name: ENSP00000360806/1-858 Len: 859 Check: 2251 Weight: 1.00 Name: ENSBTAP00000038969/1-858 Len: 859 Check: 3040 Weight: 1.00 Name: bmy_02930T0/1-663 Len: 859 Check: 1173 Weight: 1.00 Name: BACU011340/1-673 Len: 859 Check: 7832 Weight: 1.00 // 1 50 ENSTTRP00000004039/1-858 MPAGMTKHGS RSTSSLPPEP MEIVRSKACS RRVRLNVGGL AHEVLWRTLD ENSP00000360806/1-858 MPAGMTKHGS RSTSSLPPEP MEIVRSKACS RRVRLNVGGL AHEVLWRTLD ENSBTAP00000038969/1-858 MPAGMTKHGS RSTSSLPPEP MEIVRSKACS RRVRLNVGGL AHEVLWRTLD bmy_02930T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU011340/1-673 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004039/1-858 RLPRTRLGKL RDCNTHDSLL EVCDDYSLDD NEYFFDRHPG AFTSILNFYR ENSP00000360806/1-858 RLPRTRLGKL RDCNTHDSLL EVCDDYSLDD NEYFFDRHPG AFTSILNFYR ENSBTAP00000038969/1-858 RLPRTRLGKL RDCNTHDSLL EVCDDYSLDD NEYFFDRHPG AFTSILNFYR bmy_02930T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU011340/1-673 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004039/1-858 TGRLHMMEEM CALSFSQELD YWGIDEIYLE SCCQARYHQK KEQMNEELKR ENSP00000360806/1-858 TGRLHMMEEM CALSFSQELD YWGIDEIYLE SCCQARYHQK KEQMNEELKR ENSBTAP00000038969/1-858 TGRLHMMEEM CALSFSQELD YWGIDEIYLE SCCQARYHQK KEQMNEELKR bmy_02930T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU011340/1-673 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000004039/1-858 EAETLREREG EEFDNTCCAE KRKKLWDLLE KPNSSVAAKI LAIISIMFIV ENSP00000360806/1-858 EAETLREREG EEFDNTCCAE KRKKLWDLLE KPNSSVAAKI LAIISIMFIV ENSBTAP00000038969/1-858 EAETLREREG EEFDNTCCAE KRKKLWDLLE KPNSSVAAKI LAIISIMFIV bmy_02930T0/1-663 ---------- ---------- ---------- ---------- ------MFIV BACU011340/1-673 ---------- ---------- ---------- ------SSQI LAIISIMFIV 201 250 ENSTTRP00000004039/1-858 LSTIALSLNT LPELQSLDEF GQTTDNPQLA HVEAVCIAWF TMEYLLRFLS ENSP00000360806/1-858 LSTIALSLNT LPELQSLDEF GQSTDNPQLA HVEAVCIAWF TMEYLLRFLS ENSBTAP00000038969/1-858 LSTIALSLNT LPELQSLDEF GQTTDNPQLA HVEAVCIAWF TMEYLLRFLS bmy_02930T0/1-663 LSTIALSLNT LPELQSLDEF GQTTDNPQLA HVEAVCIAWF TMEYLLRFLS BACU011340/1-673 LSTIALSLNT LPELQSLDEF GQTTDNPQLA HVEAVCIAWF TMEYLLRFLS 251 300 ENSTTRP00000004039/1-858 SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR ENSP00000360806/1-858 SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR ENSBTAP00000038969/1-858 SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR bmy_02930T0/1-663 SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR BACU011340/1-673 SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR 301 350 ENSTTRP00000004039/1-858 IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF ENSP00000360806/1-858 IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF ENSBTAP00000038969/1-858 IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF bmy_02930T0/1-663 IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF BACU011340/1-673 IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF 351 400 ENSTTRP00000004039/1-858 FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA ENSP00000360806/1-858 FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA ENSBTAP00000038969/1-858 FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA bmy_02930T0/1-663 FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA BACU011340/1-673 FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA 401 450 ENSTTRP00000004039/1-858 GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIVSMNM ENSP00000360806/1-858 GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIVSMNM ENSBTAP00000038969/1-858 GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIVSMNM bmy_02930T0/1-663 GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIISMNM BACU011340/1-673 GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIVSMNM 451 500 ENSTTRP00000004039/1-858 KDAFPRSIEV MDIVVEKSGE NMGQKDK-VQ DNHLSPNKWK WTKRTLSETS ENSP00000360806/1-858 KDAFARSIEM MDIVVEKNGE NMGKKDK-VQ DNHLSPNKWK WTKRTLSETS ENSBTAP00000038969/1-858 KDAFPRSIEM MDIVVEKNGE NVGQKDK-VQ DNHLSPSKWK WTKRTLSETS bmy_02930T0/1-663 KDAFPRSIEM MDIVVEKSGE NMGQKDKVVQ DNHLSPNKWK WTKRTLSETS BACU011340/1-673 KDAFPRSIEV MDIVVEKSGD NVGQKDKVVQ DNHLSPNKWK WTKRTLSETS 501 550 ENSTTRP00000004039/1-858 SSKSFETKEQ GSPEKARSSS SPQHLNVQQL EDMYNKMAKT QSQPILNTKE ENSP00000360806/1-858 SSKSFETKEQ GSPEKARSSS SPQHLNVQQL EDMYNKMAKT QSQPILNTKE ENSBTAP00000038969/1-858 SSKSFETKEQ GSPEKARSSS SPQHLNVQQL EDMYNKMAKT QSQPILNTKE bmy_02930T0/1-663 SSKSFETKEQ GSPEKARSSS SPQHLNVQQL EDMYNKMAKT QSQPILNTKE BACU011340/1-673 SSKSFETKEQ GSPEKARSSS SPQHLNVQQL EDMYNKMAKT QSQPILNTKE 551 600 ENSTTRP00000004039/1-858 PATQSKPKEE LEMESIPSPV APLPTRTEGV IDMRSMSSID SFISCATDFP ENSP00000360806/1-858 SAAQSKPKEE LEMESIPSPV APLPTRTEGV IDMRSMSSID SFISCATDFP ENSBTAP00000038969/1-858 SATQSKPKEE LEMESIPSPV APLPTRTEGV IDMRSMSSID SFISCATDFP bmy_02930T0/1-663 SATQSKPKEE LEMESIPSPV APLPTRTEGV IDMRSMSSID SFISCATDFP BACU011340/1-673 SATQSKPKEE LEMESIPSPV APLPTRTEGV IDMRSMSSID SFISCATDFP 601 650 ENSTTRP00000004039/1-858 EATRFSHSPL ASLPSKTGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000360806/1-858 EATRFSHSPL TSLPSKTGGS TAPEVGWRGA LGASGGRFVE ANPSPDASQH ENSBTAP00000038969/1-858 EATRFSHSPL ASLPSKTGGG MAPEVGWRGA LGATGGRFVE ANSAPDASHH bmy_02930T0/1-663 EATRFSHSPL ASLPSKTGGG MAPEVGWQGA LGATGSRFVE ANPTPDASHP BACU011340/1-673 EATRFSHSPL ASLPSKTGGG MAPEVGWQGA LGATGSRFVE ANPTPDASHP 651 700 ENSTTRP00000004039/1-858 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPLVPVLG MYHDPLSNRG ENSP00000360806/1-858 SSFFIESPKS SMKTNNPLKL RALKVNFMEG DPSPLLPVLG MYHDPLRNRG ENSBTAP00000038969/1-858 STFFIESPKS SMKTTNPLKL RALKVNFMEG DPSPLVPILG MYHDPLRNRG bmy_02930T0/1-663 SAFFIESPKS SMKTTNPLKL RGLKVNFMEG DPRPLVPVLG MYHDPLRNRG BACU011340/1-673 SAFFIESPKS SMKTTNPLKL RALKVNFMEG DPRPLVPVLG MYHDPLRNRG 701 750 ENSTTRP00000004039/1-858 GAAAAVAGLE CATLLDRPVL SPESSIYTTA SARTPPRSPE KHTAIAFNFE ENSP00000360806/1-858 SAAAAVAGLE CATLLDKAVL SPESSIYTTA SAKTPPRSPE KHTAIAFNFE ENSBTAP00000038969/1-858 GAAAAVAGLE CASLLDRPVL SPESSIYTTA SARTPPRSPE KHTAIAFNFE bmy_02930T0/1-663 GAAAAVAGLE CATLLDRPVL SPESSIYTTA SARTPPRSPE KHTAIAFNFE BACU011340/1-673 GAAAAVAGLE CATLLDRPVL SPESSIYTTA SARTPPRSPE KHTAIAFNFE 751 800 ENSTTRP00000004039/1-858 AGIHQYIDAD TDDEGQVLYS VDSSPPKSLH GNTSPKFSVG TRSEKNHFES ENSP00000360806/1-858 AGVHQYIDAD TDDEGQLLYS VDSSPPKSLP GSTSPKFSTG TRSEKNHFES ENSBTAP00000038969/1-858 AGIHQYIDAD TDDEGQVLYS VDSSPPKSVH GNTSPKFSVG TRSEKNHFES bmy_02930T0/1-663 AGIHQYIDAD TDDEGQVLYS VDSSPPKSLH GNTSPKFSVG TRSEKNHFES BACU011340/1-673 AGIHQYIDAD TDDEGQVLYS VDSSPPKSLH GNTSPKFSVG TRSEKNHFES 801 850 ENSTTRP00000004039/1-858 SPLPTSPKFL RQNCIYSTEA LTGKTPSGQE KCKLENHISP DVRVLPGGGA ENSP00000360806/1-858 SPLPTSPKFL RQNCIYSTEA LTGKGPSGQE KCKLENHISP DVRVLPGGGA ENSBTAP00000038969/1-858 SPLPTSPKFL RQNCIYSTEA LTGKAPSGPE KCKLENHISP DVRVLPGGGA bmy_02930T0/1-663 SPLPTSPKFL RQNCIYSTEA LTGKTPSGQE KCKLENHISP DVRVLPGGGA BACU011340/1-673 SPLPTSPKFL RQNCIYSTEA LTGKTPSGQE KCKLENHISP DVRVLPGGGA 851 900 ENSTTRP00000004039/1-858 HGSTRDQSI ENSP00000360806/1-858 HGSTRDQSI ENSBTAP00000038969/1-858 HGSSRDQSI bmy_02930T0/1-663 HGSTRDQSI BACU011340/1-673 HGSTRDQSI