KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:16 2014 Check: 00 .. Name: bmy_03729T0/1-425 Len: 727 Check: 1235 Weight: 1.00 Name: ENSTTRP00000012114/1-727 Len: 727 Check: 3767 Weight: 1.00 Name: ENSP00000312185/1-727 Len: 727 Check: 5623 Weight: 1.00 Name: BACU016453/1-727 Len: 727 Check: 5579 Weight: 1.00 Name: ENSBTAP00000038993/1-727 Len: 727 Check: 6050 Weight: 1.00 // 1 50 bmy_03729T0/1-425 MPPPADIVKV AIEWPGAYPK LMEIDQKKPL SAIIKEVCDG WSLANHEYFA ENSTTRP00000012114/1-727 MPPPADIVKV AIEWPGAYPK LMEIDQKKPL SAIIKEVCDG WSLANHEYFA ENSP00000312185/1-727 MPPPADIVKV AIEWPGAYPK LMEIDQKKPL SAIIKEVCDG WSLANHEYFA BACU016453/1-727 MPPPADIVKV AIEWPGAYPK LMEIDQKKPL SAIIKEVCDG WSLANHEYFA ENSBTAP00000038993/1-727 MPPPADIVKV AIEWPGAYPK LMEIDQKKPL SAIIKEVCDG WSLANHEYFA 51 100 bmy_03729T0/1-425 LQHADSSNFY ITEKNRNEIK NGTILRLTTS PAQNAHQLHE RIQSSSMDAK ENSTTRP00000012114/1-727 LQHADSSNFY ITEKNRNEIK NGTILRLTTS PAQNAHQLHE RIQSSSMDAK ENSP00000312185/1-727 LQHADSSNFY ITEKNRNEIK NGTILRLTTS PAQNAQQLHE RIQSSSMDAK BACU016453/1-727 LQHADSSNFY ITEKNRNEIK NGTILRLTTS PAQNAHQLHE RIQSSSMDAK ENSBTAP00000038993/1-727 LQHADSSNFY ITEKNRNEIK NGTILRLTTS PAQNAQQLHE RIQSSSMDAK 101 150 bmy_03729T0/1-425 LEALKDLASL SRDVTFAQEF INLDGISLLT QMVESGTERY QKLQKIMKPC ENSTTRP00000012114/1-727 LEALKDLASL SRDVTFAQEF INLDGISLLT QMVESGTERY QKLQKIMKPC ENSP00000312185/1-727 LEALKDLASL SRDVTFAQEF INLDGISLLT QMVESGTERY QKLQKIMKPC BACU016453/1-727 LEALKDLASL SRDVTFAQEF INLDGISLLT QMVESGTERY QKLQKIMKPC ENSBTAP00000038993/1-727 LEALKDLASL SRDVTFAQEF INLDGISLLT QMVESGTERY QKLQKIMKPC 151 200 bmy_03729T0/1-425 FGDMLSFTLT AFVELMDHGI VSWDTFSVAF IKKIASFVNK SAIDVSILQR ENSTTRP00000012114/1-727 FGDMLSFTLT AFVELMDHGI VSWDTFSVAF IKKIASFVNK SAIDVSILQR ENSP00000312185/1-727 FGDMLSFTLT AFVELMDHGI VSWDTFSVAF IKKIASFVNK SAIDISILQR BACU016453/1-727 FGDMLSFTLT AFVELMDHGI VSWDTFSVAF IKKIASFVNK SAIDVSILQR ENSBTAP00000038993/1-727 FGDMLSFTLT AFVELMDHGI VSWDTFSVAF IKKIASFVNK SAIDVSILQR 201 250 bmy_03729T0/1-425 SLAILESMVL NSHDLYQKVA QEITIGQLIP HLQGTDQEIQ TYTIAVINAL ENSTTRP00000012114/1-727 SLAILESMVL NSHDLYQKVA QEITIGQLIP HLQGTDQEIQ TYTIAVINAL ENSP00000312185/1-727 SLAILESMVL NSHDLYQKVA QEITIGQLIP HLQGSDQEIQ TYTIAVINAL BACU016453/1-727 SLAILESMVL NSHDLYQKVA QEITIGQLIP HLQGTDQEIQ TYTIAVINAL ENSBTAP00000038993/1-727 SLAILESMVL NSHDLYQKVA QEITIGQLIP HLQGTDQEIQ TYTIAVINAL 251 300 bmy_03729T0/1-425 FLKAPDEKRQ EMANILAQKQ LRSIILTHVI RAQRAINNEM AHQLYVLQVL ENSTTRP00000012114/1-727 FLKAPDEKRQ EMANILAQKQ LRSIILTHVI RAQRAINNEM AHQLYVLQVL ENSP00000312185/1-727 FLKAPDERRQ EMANILAQKQ LRSIILTHVI RAQRAINNEM AHQLYVLQVL BACU016453/1-727 FLKAPDEKRQ EMANILAQKQ LRSIILTHVI RAQRAINNEM AHQLYVLQVL ENSBTAP00000038993/1-727 FLKAPDERRQ EMANILAQKQ LRSIILTHVI RAQRAINNEM AHQLYVLQVL 301 350 bmy_03729T0/1-425 TFNLLEDRMM TKMDPQDQAQ RDIIFELRRI AFDAESEPNN SSGSMEKRKS ENSTTRP00000012114/1-727 TFNLLEDRMM TKMDPQDQAQ RDIIFELRRI AFDAESEPNN SSGSMEKRKS ENSP00000312185/1-727 TFNLLEDRMM TKMDPQDQAQ RDIIFELRRI AFDAESEPNN SSGSMEKRKS BACU016453/1-727 TFNLLEDRMM TKMDPQDQAQ RDIIFELRRI AFDAESEPNN SSGSMEKRKS ENSBTAP00000038993/1-727 TFNLLEDRMM TKMDPQDQAQ RDIIFELRRI AFDAESEPNN SSGSMEKRKS 351 400 bmy_03729T0/1-425 MYTRDYKKLG FINHVNPAMD FTQTPPGMLA LDNMLYFAKH HQDAYIR--- ENSTTRP00000012114/1-727 MYTRDYKKLG FINHVNPAMD FTQTPPGMLA LDNMLYFAKH HQDAYIRIVL ENSP00000312185/1-727 MYTRDYKKLG FINHVNPAMD FTQTPPGMLA LDNMLYFAKH HQDAYIRIVL BACU016453/1-727 MYTRDYKKLG FINHVNPAMD FTQTPPGMLA LDNMLYFAKH HQDAYIRIVL ENSBTAP00000038993/1-727 MYTRDYKKLG FINHVNPAMD FTQTPPGMLA LDNMLYFAKH HQDAYIRIVL 401 450 bmy_03729T0/1-425 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012114/1-727 ENSSREDKHE CPFGRSSIEL TKMLCEILKV GELPSETCND FHPMFFTHDR ENSP00000312185/1-727 ENSSREDKHE CPFGRSSIEL TKMLCEILKV GELPSETCND FHPMFFTHDR BACU016453/1-727 ENSSREDKHE CPFGRSSIEL TKMLCEILKV GELPSETCND FHPMFFTHDR ENSBTAP00000038993/1-727 ENSSREDKHE CPFGRSSIEL TKMLCEILKV GELPSETCND FHPMFFTHDR 451 500 bmy_03729T0/1-425 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012114/1-727 SFEEFFCICI QLLNKTWKEM RATSEDFNKV MQVVKEQVMR ALTTKPSSLD ENSP00000312185/1-727 SFEEFFCICI QLLNKTWKEM RATSEDFNKV MQVVKEQVMR ALTTKPSSLD BACU016453/1-727 SFEEFFCICI QLLNKTWKEM RATSEDFNKV MQVVKEQVMR ALTTKPSSLD ENSBTAP00000038993/1-727 SFEEFFCICI QLLNKTWKEM RATSEDFNKV MQVVKEQVMR ALTTKPSSLD 501 550 bmy_03729T0/1-425 ---------- ---------- ---------- ----DAQQSY EVDFLEFV-- ENSTTRP00000012114/1-727 QFKSKLQNLS YTEILKIRQS ERMNQEDFQS RPILELKEKI QPEILELIKQ ENSP00000312185/1-727 QFKSKLQNLS YTEILKIRQS ERMNQEDFQS RPILELKEKI QPEILELIKQ BACU016453/1-727 QFKSKLQNLS YTEILKIRQS ERMNQEDFQS RPILELKEKI QPEILELIKQ ENSBTAP00000038993/1-727 QFKSKLQNLS YTEILKIRQS ERMNQEDFQS RPILELKEKI QPEILELIKQ 551 600 bmy_03729T0/1-425 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012114/1-727 QRLNRLVEGT CFRKLNCRRR QDKFWYCRLS PNHKVLHYGD LEESPQGEVP ENSP00000312185/1-727 QRLNRLVEGT CFRKLNARRR QDKFWYCRLS PNHKVLHYGD LEESPQGEVP BACU016453/1-727 QRLNRLVEGT CFRKLNCRRR QDKFWYCRLS PNHKVLHYGD LEESPQGEVP ENSBTAP00000038993/1-727 QRLNRLVEGT CFRKLNCRRR QDKFWYCRLS PNHKVLHYGD LEESPQGEVP 601 650 bmy_03729T0/1-425 YNSQKDGMPH ASLH------ ---------- ---------- ---------- ENSTTRP00000012114/1-727 HDSLQDKLPV ADIKAVVTGK DCPHMKEKGX XXXXXXXXXX XXXXXXXXXX ENSP00000312185/1-727 HDSLQDKLPV ADIKAVVTGK DCPHMKEKGA LKQNKEVLEL AFSILYDSNC BACU016453/1-727 HDSLQDKLPV ADIKAVVTGK DCPHMKEKGA LKQNKEVLEL AFSILYDSNC ENSBTAP00000038993/1-727 HDSLQDKLPV ADIKAVVTGK DCPHMKEKGA LKQNKEVLEL AFSILYDSNC 651 700 bmy_03729T0/1-425 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012114/1-727 XXXXXXXXXX XYCIWTDGLN ALLGKDMMSD LTRNDLDTLL SMEIKLRLLD ENSP00000312185/1-727 QLNFIAPDKH EYCIWTDGLN ALLGKDMMSD LTRNDLDTLL SMEIKLRLLD BACU016453/1-727 QLNFIAPDKH EYCIWTDGLN ALLGKDMMSD LTRNDLDTLL SMEIKLRLLD ENSBTAP00000038993/1-727 QLNFIAPDKH EYCIWTDGLN ALLGKDMMSD LTRNDLDTLL SMEIKLRLLD 701 750 bmy_03729T0/1-425 ---------- ---------- ------- ENSTTRP00000012114/1-727 LENIQIPDAP PPIPKEPSNY DFVYDCN ENSP00000312185/1-727 LENIQIPDAP PPIPKEPSNY DFVYDCN BACU016453/1-727 LENIQIPDAP PPIPKEPSNY DFVYDCN ENSBTAP00000038993/1-727 LENIQIPDAP PPIPKEPSNY DFVYDCN