KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:16 2014 Check: 00 .. Name: ENSBTAP00000038994/1-336 Len: 406 Check: 9010 Weight: 1.00 Name: bmy_06245T0/1-307 Len: 406 Check: 8648 Weight: 1.00 Name: ENSP00000361301/1-365 Len: 406 Check: 6685 Weight: 1.00 Name: BACU011367/1-406 Len: 406 Check: 7298 Weight: 1.00 Name: ENSTTRP00000005842/1-366 Len: 406 Check: 8021 Weight: 1.00 // 1 50 ENSBTAP00000038994/1-336 MGRCAPDVAF VWRAVLTLGL VLLYYCFSIG ITFYNKWLTK -VHGGLRRPL bmy_06245T0/1-307 ----MTQAAF LW-------- ---------- ---------- ---------- ENSP00000361301/1-365 MGRWALDVAF LWKAVLTLGL VLLYYCFSIG ITFYNKWLTK SFHFPLFMTM BACU011367/1-406 MGRWALDVAF VWRAVLTLGL VLLYYCFSIG ITFYNKWLTK SFHFPLFMTM ENSTTRP00000005842/1-366 MGRWALDVAF VWRAVLTLGL VLLYYCFSIG ITFYNKWLTK SFHFPLFMTM 51 100 ENSBTAP00000038994/1-336 IFSSLASARA SASQPGSQST PERGRLVVAW PTPLNTVSAT ALATALDVGL bmy_06245T0/1-307 ------SLYP DCPAALREV- ---------- -----RGLPL TLPSPL-IAL ENSP00000361301/1-365 LHLAVIFLFS ALSRALVQCS SHRARVVLSW ADYLRRVAPT ALATALDVGL BACU011367/1-406 LHLAVIFLFS ALSRALVQCS SHRARVVLSW TDYLRRVAPT ALATALDVGL ENSTTRP00000005842/1-366 LHLAVIFLFS ALSRALVQCS SHRARVVLSW ADYLRRVAPT ALATALDVGL 101 150 ENSBTAP00000038994/1-336 SNWSFLYITV SL-------- ---------- ---------- ---------- bmy_06245T0/1-307 --WVRAPSSS GM-------- ---------- ---------- ----SWVIFP ENSP00000361301/1-365 SNWSFLYVTV SL-------- ---------- ---------- ---------- BACU011367/1-406 SNWSFLYITV SLLPCCPQGS PGSPPDPFQP TDCAGVRAPS SSGTSWVIFP ENSTTRP00000005842/1-366 SNWSFLYITV SL-------- ---------- ---------- ---------- 151 200 ENSBTAP00000038994/1-336 --YTMTKSSA VLFILIFSLI FKLEELRAAL VLVVLLIAGG LFMFTYKSTQ bmy_06245T0/1-307 RRYTMTKSSA VLFILIFSLI FKLEELRAAL VLVVLLIAGG LFMFTYKSTQ ENSP00000361301/1-365 --YTMTKSSA VLFILIFSLI FKLEELRAAL VLVVLLIAGG LFMFTYKSTQ BACU011367/1-406 RRYTMTKSSA VLFILIFSLI FKLEELRAAL VLVVVLIAGG LFMFTYKSTQ ENSTTRP00000005842/1-366 --YTMTKSSA VLFILIFSLI FKLEELRAAL VLVVLLIAGG LFMFTYKSTQ 201 250 ENSBTAP00000038994/1-336 FNIEGFALVL GASFIGGIRW TLTQMLLQKA ELGL------ ---------- bmy_06245T0/1-307 FNAEGFALVL GASFIGGIRW TLTQMLLQKA ELGLQNPIDT MFHLQPLMFL ENSP00000361301/1-365 FNVEGFALVL GASFIGGIRW TLTQMLLQKA ELGLQNPIDT MFHLQPLMFL BACU011367/1-406 FNAEGFALVL GASFIGGIRW TLTQMLLQKA ELGLQNPVDT MFHLQPLMLL ENSTTRP00000005842/1-366 FNAEGFALVL GASFIGGIRW TLTQMLLQKA ELGLQNPIDT MFHLQPLMFL 251 300 ENSBTAP00000038994/1-336 ---------- --HLSTSEKI FRFQDTGLLL RVLGSLFLGG ILAFGLGFSE bmy_06245T0/1-307 GLFPLFAVFE GLHLSTSEKI FRFQDTGLLL RVLGSLFLGG ILAFGLGFSE ENSP00000361301/1-365 GLFPLFAVFE GLHLSTSEKI FRFQDTGLLL RVLGSLFLGG ILAFGLGFSE BACU011367/1-406 GLFPLFAVFE GLHLSTSEKI FRFQDTGLLL RVLGSLFLGG ILAFGLGFSE ENSTTRP00000005842/1-366 GLFPLFAVFE GLHLSTSEKI FRFQDTGLLL RVLGSLFLGG ILAFGLGFSE 301 350 ENSBTAP00000038994/1-336 FLLVSRTSSL TLSIAGIFKE VCTLLLAAHL LGDQISLLNW LGFALCLSGI bmy_06245T0/1-307 FLLVSRTSSL TLSIAGIFKE VCTLLLAAHL LGDQISLLNW LGFALCLSGI ENSP00000361301/1-365 FLLVSRTSSL TLSIAGIFKE VCTLLLAAHL LGDQISLLNW LGFALCLSGI BACU011367/1-406 FLLVSRTSSL TLSIAGIFKE VCTLLLAAHL LGDQISLLNW LGFALCLSGI ENSTTRP00000005842/1-366 FLLVSRTSSL TLSIAGIFKE VCTLLLAAHL LGDQISLLNW LGFALCLSGI 351 400 ENSBTAP00000038994/1-336 SLHIALKALH ARGDGAPKPL KGLGSNPDLE LLLRSSQPED EDNEEEE-YF bmy_06245T0/1-307 SLHIALKALH SRGDSGPKPL KGLGSNPDLE LLLRTSQPEE KDNEEEEGYF ENSP00000361301/1-365 SLHVALKALH SRGDGGPKAL KGLGSSPDLE LLLRSSQREE GDNEEEE-YF BACU011367/1-406 SLHIALKALH SRGDSGPKPL KGLGSNPDLE LLLRTSQPEE KDNEEEEGYF ENSTTRP00000005842/1-366 SLHIALKALH SRGDSGPKPV KGLGSSPDLE LLLRTSQPEE EDNEEEEGRF 401 450 ENSBTAP00000038994/1-336 VAQGQQ bmy_06245T0/1-307 VAQGQQ ENSP00000361301/1-365 VAQGQQ BACU011367/1-406 VAQGQQ ENSTTRP00000005842/1-366 VAQGQQ