KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:22 2014 Check: 00 .. Name: ENSTTRP00000007885/1-363 Len: 458 Check: 5836 Weight: 1.00 Name: ENSP00000327959/1-401 Len: 458 Check: 5811 Weight: 1.00 Name: ENSBTAP00000039058/1-252 Len: 458 Check: 3538 Weight: 1.00 Name: bmy_08189T0/1-272 Len: 458 Check: 4766 Weight: 1.00 Name: BACU014691/1-272 Len: 458 Check: 4573 Weight: 1.00 // 1 50 ENSTTRP00000007885/1-363 VRLEQSWACA GAGSPHCSGS GGEGCDDPPR P--------- ---------- ENSP00000327959/1-401 MVLAQSRVSA GVGSPHCSGS GGGGSDSFPW PASHPGNPQC SFSTAFLASP ENSBTAP00000039058/1-252 ---------- ---------- ---------- ---------- ---------- bmy_08189T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU014691/1-272 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007885/1-363 ---------- ---------- ---------- ---------- ---------- ENSP00000327959/1-401 RLSRGTLAYL PPAPWSSLAT PSALLGSSCA PPPPPARCPQ PRALSPELGT ENSBTAP00000039058/1-252 ---------- ---------- ---------- ---------- ---------- bmy_08189T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU014691/1-272 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007885/1-363 ---------- ---------- ----PVRLWG SPLPAIVPVP PPSFPAP--L ENSP00000327959/1-401 KAGPRRPHRW ELPRSPSQGA QGPAPRRRLL ETMKGIVAAS GSETEDEDSM ENSBTAP00000039058/1-252 ---------- ---------- ---------- ---------- ---------M bmy_08189T0/1-272 ---------- ---------- ---------M KSKKGVVAAS GSETEDDDSM BACU014691/1-272 ---------- ---------- ---------M KSKKGVVAAS GSETEEDDSM 151 200 ENSTTRP00000007885/1-363 SAPCPQQPGD GAGTRRSLGN LRGALPRGRG TATRRLMETM KXXXXXXXXX ENSP00000327959/1-401 DIPLDLSSSA GSGKRRR--- -RGNLPK--- -------ESV QILRD----- ENSBTAP00000039058/1-252 DSPLDLSSSA GSGKRRR--- -RGNLPK--- -------ESV QILRD----- bmy_08189T0/1-272 DSPLDLSSSA GSGKRRR--- -RGNLPK--- -------ESV QILRD----- BACU014691/1-272 DSPLDLSSSA GSGKRRR--- -RGNLPK--- -------ESV QILRD----- 201 250 ENSTTRP00000007885/1-363 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327959/1-401 ---------- ---------- ---------- --------WL YEHRYNAYPS ENSBTAP00000039058/1-252 ---------- ---------- ---------- --------WL YEHRYNAYPS bmy_08189T0/1-272 ---------- ---------- ---------- --------WL YEHRYNAYPS BACU014691/1-272 ---------- ---------- ---------- --------WL YEHRYNAYPS 251 300 ENSTTRP00000007885/1-363 XXXXXXXXXX XXXXXXXVCN WFINARRRLL PDMLRKDGKD PNQFTISRRG ENSP00000327959/1-401 EQEKALLSQQ THLSTLQVCN WFINARRRLL PDMLRKDGKD PNQFTISRRG ENSBTAP00000039058/1-252 EQEKALLSQQ THLSTLQVCN WFINARRRLL PDMLRKDGKD PNRFTISRRG bmy_08189T0/1-272 EQEKALLSQQ THLSTLQVCN WFINARRRLL PDMLRKDGKD PNQFTISRRG BACU014691/1-272 EQEKALLSQQ THLSTLQVCN WFINARRRLL PDMLRKDGKD PNQFTISRRG 301 350 ENSTTRP00000007885/1-363 AKISEASSVE SATGIKNFMP ALEESPFHSC TAGPNPALGR PLSPKPSSPG ENSP00000327959/1-401 AKISETSSVE SVMGIKNFMP ALEETPFHSC TAGPNPTLGR PLSPKPSSPG ENSBTAP00000039058/1-252 AKMTEASSVE SAVSIRNLMP ALEESPFHSC TAGPNPALGR PLSPKPSSPG bmy_08189T0/1-272 AKISEASSVE SATGIKNFMP ALEESPFHSC TAGPNPALGR PLSPKPSSPG BACU014691/1-272 AKISEASSVE SATGIKNFMP ALEESPFHSC TAGSTPALGR PLSPKPSSPG 351 400 ENSTTRP00000007885/1-363 SILARPSVIC HTTVTALKDV PFSLCQSVGV GQNTDIQQMA ASSFTDTSLM ENSP00000327959/1-401 SVLARPSVIC HTTVTALKDV PFSLCQSVGV GQNTDIQQIA AKNFTDTSLM ENSBTAP00000039058/1-252 SILARPSVIC HTTVTALKDV PFSLCQSVGV GQNTDIQQMA NSSFTDTSLM bmy_08189T0/1-272 SILARPSVIC HTTVTALKDV PFSLCQSVGV GQNTDIQQMA ASSFTDTSLM BACU014691/1-272 SILARPSVIC HTTVTALKDV PFSLCQSVGV GQNADIQQMA ASSFTDTSLM 401 450 ENSTTRP00000007885/1-363 YPEDTCKSGP SAHTQSGLFN TPPPTPPDLN QDFSGFQLLV DVALKRAAEM ENSP00000327959/1-401 YPEDTCKSGP STNTQSGLFN TPPPTPPDLN QDFSGFQLLV DVALKRAAEM ENSBTAP00000039058/1-252 YAEDSCKSGP SANTQSGLFN TPPPTPPDLN QDFSGFQLLV DVALKQAAEM bmy_08189T0/1-272 YPEDTCKSGP SAHTQSGLFN TPPPTPPDLN QDFSGFQLLV DVALKRAAEM BACU014691/1-272 YPEDTCKSGP SAHTQSGLFN TPPPTPPDLN QDFSGFQLLV DVALKRAAEM 451 500 ENSTTRP00000007885/1-363 ELQAKLMA ENSP00000327959/1-401 ELQAKLTA ENSBTAP00000039058/1-252 ELQAKLMA bmy_08189T0/1-272 ELQAKLMA BACU014691/1-272 ELQAKLMA