KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:49:23 2014 Check: 00 .. Name: ENSP00000023939/1-306 Len: 306 Check: 9179 Weight: 1.00 Name: ENSTTRP00000014102/1-306 Len: 306 Check: 613 Weight: 1.00 Name: ENSBTAP00000039110/1-299 Len: 306 Check: 2416 Weight: 1.00 Name: bmy_00242T0/1-162 Len: 306 Check: 7888 Weight: 1.00 // 1 50 ENSP00000023939/1-306 MGCDGGTIPK RHELVKGPKK VEKVDKDAEL VAQWNYCTLS QEILRRPIVA ENSTTRP00000014102/1-306 MGCDGGTIPK RHELVKGPKK VEKVDKNAEL VAQWNYCTLS QEILRRPIVA ENSBTAP00000039110/1-299 MGCDGGTIPK RHELVKGPKK VEKVDKDAEL VAQWNYCTLS QEILRRPIVA bmy_00242T0/1-162 MGCDGGTIPK RHELVKGPKK VEKVDKDAEL VAQWNYCTLS QEILRRPIVA 51 100 ENSP00000023939/1-306 CELGRLYNKD AVIEFLLDKS AEKALGKAAS HIKSIKNVTE LKLSDNPAWE ENSTTRP00000014102/1-306 CELGRLYNKD AIIEFLLDKS SEKALGKAAS HIKSIKNVTE LRLSDNPAWE ENSBTAP00000039110/1-299 CELGRLYNKD AVIEFLLDKS SEKALGKAAS HIKSIKNVTE LRLSDNPAWE bmy_00242T0/1-162 CELGRLYNKD AIIEFLLDKS SEKALGKAAS HIKSIKNVTE LRLSDNPAWE 101 150 ENSP00000023939/1-306 GDKGNTKGDK HDDLQRARFI CPVVGLEMNG RHRFCFLRCC GCVFSERALK ENSTTRP00000014102/1-306 GDKGNTKGDK HDDLQRARFI CPVVGLEMNG RHRFCFLRCC GCVFSERALK ENSBTAP00000039110/1-299 GDKGNTKGDK HDDLQRARFI CPVVGLEMNG RHRFCFLRCC GCVFSERALK bmy_00242T0/1-162 GDKGNTKGDK HDDLQRARFI CPVVGLEMNG RHRFCFLRGC GCVFSERALK 151 200 ENSP00000023939/1-306 EIKAEVCHTC GAAFQEDDVI MLNGTKEDVD VLKTRMEERR LRAKLEKKTK ENSTTRP00000014102/1-306 EIKAEVCHTC GAAFQEDDVI VLNGTKEDVE TLKRRMEGRR LRSKLGKKTK ENSBTAP00000039110/1-299 EIKAEVCHTC GAAFQEDDVI VLNGTKEDVE VLKSRMEERR LRAKLGKKTK bmy_00242T0/1-162 EIKTEVCHTV SC-------- ---------- ---------- ---------- 201 250 ENSP00000023939/1-306 KPKAAESVSK PDVSEEAPGP SKVKTGKPEE ASLDSREKKT NLAPKSTAMN ENSTTRP00000014102/1-306 KPKVAESLSK SDVSEEAPGP SKMKTGKPEE TSLDSQEKKT TLPPRSAAAQ ENSBTAP00000039110/1-299 KPKVAESVSK SEVSEETPGP SKVKTGKPEE TSLDTREKKT NSAPKSAAAH bmy_00242T0/1-162 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000023939/1-306 ESSSGKAGKP PCGATKRSIA DSEESEAYKS LFTTHSSAKR SKEESAHWVT ENSTTRP00000014102/1-306 GSSSGKAGKP PCGAMKRSIA DSGESEAYKS LFTTHSSAKR SKEESAHWVT ENSBTAP00000039110/1-299 GITSGKAA-- -----KRSIA DSEESEAYKS LFTTHSSAKR SKEESAHWVT bmy_00242T0/1-162 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000023939/1-306 HTSYCF ENSTTRP00000014102/1-306 HTSYCF ENSBTAP00000039110/1-299 HTSYCF bmy_00242T0/1-162 ------