KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:28 2014 Check: 00 .. Name: ENSBTAP00000039331/1-400 Len: 417 Check: 4013 Weight: 1.00 Name: ENSP00000475344/1-380 Len: 417 Check: 4593 Weight: 1.00 Name: ENSTTRP00000014461/1-383 Len: 417 Check: 1079 Weight: 1.00 Name: BACU017233/1-400 Len: 417 Check: 7884 Weight: 1.00 Name: bmy_19362T0/1-383 Len: 417 Check: 2122 Weight: 1.00 // 1 50 ENSBTAP00000039331/1-400 MEEGGEYDGY YGADNQSECE YEDWQSSGAL IPAIYMVVFV LGTAGNGLVL ENSP00000475344/1-380 MEEGGDFDNY YGADNQSECE YTDWKSSGAL IPAIYMLVFL LGTTGNGLVL ENSTTRP00000014461/1-383 MEEGGDFDNY YGVDNQSECE YADWKSSGAL IPAIYMLVFL LGTTGNGLVL BACU017233/1-400 MEEGGDFDNY YGVDNQSECE YADWKSSGAL IPAIYMLVFL LGTTGNGLVL bmy_19362T0/1-383 MEEGGDFDNY YGVDNQSECE YADWKSSGAL IPAIYMLVFL LGTTGNGLVL 51 100 ENSBTAP00000039331/1-400 WTIFRSGRDR RRAADVFIAS LAVADLTFVV TLPLWATYTY RDYDWPFGAF ENSP00000475344/1-380 WTVFRSSREK RRSADIFIAS LAVADLTFVV TLPLWATYTY RDYDWPFGTF ENSTTRP00000014461/1-383 WTLFRSSREK RRSADIFIAS LAVADLTFVV TLPLWATYTY RDYDWPFGAF BACU017233/1-400 WTVFRSSREK RRSADIFIAS LAVADLTFVV TLPLWATYTY RDYDWPFGAF bmy_19362T0/1-383 WTVFRSSREK RRSADIFIAS LAVADLTFVV TLPLWATYTY RDYDWPFGAF 101 150 ENSBTAP00000039331/1-400 ACKLSSYLIF VNMYASVFCL TGLSLDRYLA IVRPVANARL RPRVGGAVAT ENSP00000475344/1-380 FCKLSSYLIF VNMYASVFCL TGLSFDRYLA IVRPVANARL RLRVSGAVAT ENSTTRP00000014461/1-383 ACKLSSYLIF VNMYASVFCL TGLSFDRYLA IVRPVANARL RLRVSGAAAT BACU017233/1-400 ACKLSSYLIF VNMYASVFCL TGLSFDRYLA IVRPVANARL RLRVSGAAAT bmy_19362T0/1-383 ACKLSSYLIF VNMYASVFCL TGLSFDRYLA IVRPVANARL RLRVSGAAAT 151 200 ENSBTAP00000039331/1-400 AGLWALAGLL ALPVLVFRAT STVLQAENAT KVQCYMDYSL VAGPDAEWAW ENSP00000475344/1-380 AVLWVLAALL AMPVMVLRTT GDL---ENTT KVQCYMDYSM VATVSSEWAW ENSTTRP00000014461/1-383 AVLWALAALL AVPVMVFRST GTILHVENST RVQCFMDYSM VAGPSSEWAW BACU017233/1-400 AVLWALAALL AVPVMVFRST GAILHVENST RVQCYMDYSM VATPSSEWAW bmy_19362T0/1-383 AVLWALAALL AVPVMVFRST GAILHVENST RVQCYMDYSM VATPSSEWAW 201 250 ENSBTAP00000039331/1-400 EVGLGVSSTA LGFAGPFAVM LTCYFCIGRT VAGHFGKERA RGLRKRRRLL ENSP00000475344/1-380 EVGLGVSSTT VGFVVPFTIM LTCYFFIAQT IAGHFRKERI EGLRKRRRLL ENSTTRP00000014461/1-383 EVGLGVSSTA VGFVVPFIVM LTCYFFIAQT IAGHFRKERI EGLRKRRRLL BACU017233/1-400 EVGLGVSSTA VGFVVPFTIM LTCYFFIAQT IAGHFRKERI EGLRKRRRLL bmy_19362T0/1-383 EVGLGVSSTA VGFVVPFTIM LTCYFFIAQT IAGHFRKERI EGLRKRRRLL 251 300 ENSBTAP00000039331/1-400 AIIAVLVLTF ALCWLPYHLV KTLYVLGSLL RWPCAFDLFL MNVFPYCT-- ENSP00000475344/1-380 SIIVVLVVTF ALCWMPYHLV KTLYMLGSLL HWPCDFDLFL MNIFPYCT-- ENSTTRP00000014461/1-383 SIIVVLVLTF ALCWTPYHLV KTLYMLGSLL HWPCDFDIFL LNVFPYCT-- BACU017233/1-400 SIIVVLVVTF ALCWMPYHLV KTLYMLGSLL HWPCDFDIFL XXXXXXXXXX bmy_19362T0/1-383 SIIVVLVVTF ALCWMPYHLV KTLYMLGSLL HWPCDFDIFL LNVFPYCT-- 301 350 ENSBTAP00000039331/1-400 ---------- -----CVSYV NSCLNPFLYA FFDPRFRQAC ASVLCWGRRG ENSP00000475344/1-380 ---------- -----CISYV NSCLNPFLYA FFDPRFRQAC TSMLCCGQSR ENSTTRP00000014461/1-383 ---------- -----CISYV NSCLNPFLYA FFDLRFRQAC ASVLCWGQSR BACU017233/1-400 XXXXXXXXXX XXXXXCISYV NSCLNPFLYA FFDLRFRQAC ASVLCWGQSR bmy_19362T0/1-383 ---------- -----CISYV NSCLNPFLYA FFDLRFRQAC ASVLCWGRSR 351 400 ENSBTAP00000039331/1-400 CGGAWRAGGG GGGGGGRGGG GGDKSASSSS SASSGHSQGP GPGGAGKGGE ENSP00000475344/1-380 CAGTSHS--- ---------S SGEKSASYSS ----GHSQGP GP-NMGKGGE ENSTTRP00000014461/1-383 CGGASHS--- ---------S SGEKSASYSS ----GHSQGP GP-GSGKGGE BACU017233/1-400 CGGASHS--- ---------S SGEKSASYSS ----GHSQGP GP-GSGKGGE bmy_19362T0/1-383 CGGASHS--- ---------S SGEKSASYSS ----GHSQGP GP-GSGKGGE 401 450 ENSBTAP00000039331/1-400 PMPEKSIPYS QETLLVD ENSP00000475344/1-380 QMHEKSIPYS QETLVVD ENSTTRP00000014461/1-383 PTQEKSIPYS QETLVVD BACU017233/1-400 PTQEKSIPYS QETLVVD bmy_19362T0/1-383 PTQEKSIPYS QETLVVD