KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:29 2014 Check: 00 .. Name: bmy_17536T0/1-292 Len: 416 Check: 7612 Weight: 1.00 Name: ENSBTAP00000039342/1-405 Len: 416 Check: 9117 Weight: 1.00 Name: ENSP00000263314/1-397 Len: 416 Check: 1862 Weight: 1.00 Name: BACU017236/1-397 Len: 416 Check: 1858 Weight: 1.00 Name: ENSTTRP00000001952/1-396 Len: 416 Check: 8081 Weight: 1.00 // 1 50 bmy_17536T0/1-292 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV ENSBTAP00000039342/1-405 LLRGHSLSMN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV ENSP00000263314/1-397 --------MN CISDFFTYET TKSVVVKSWT IGIINRVVQL LIISYFVGWV BACU017236/1-397 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV ENSTTRP00000001952/1-396 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV 51 100 bmy_17536T0/1-292 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQVGSPYLP ENSBTAP00000039342/1-405 FLHEKAYQVR DTAIESSVVT KVKGFGRYAN RVMDVSDYVT PPQGTSVFVI ENSP00000263314/1-397 FLHEKAYQVR DTAIESSVVT KVKGSGLYAN RVMDVSDYVT PPQGTSVFVI BACU017236/1-397 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQGTSVFVI ENSTTRP00000001952/1-396 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQGTSVFVI 101 150 bmy_17536T0/1-292 RGAVQTADGQ APPPQGPVWV LHTPVSPQSE EKFRCVSDSQ CGPERFPGVG ENSBTAP00000039342/1-405 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CGPERFPGGG ENSP00000263314/1-397 ITKMIVTENQ M---QGFC-- ------PESE EKYRCVSDSQ CGPERLPGGG BACU017236/1-397 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CGPERFPGVG ENSTTRP00000001952/1-396 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CQPERFP-VG 151 200 bmy_17536T0/1-292 ILTGRCVNYS SELRTCEIQG WCPTEVDTVE MPVMMEAENF TIFIKNSIRF ENSBTAP00000039342/1-405 ILTGRCVNYS SELRTCEIQG WCPAEVDTVE TPVMMEAENF TIFIKNSIRF ENSP00000263314/1-397 ILTGRCVNYS SVLRTCEIQG WCPTEVDTVE TPIMMEAENF TIFIKNSIRF BACU017236/1-397 ILTGRCVNYS SELRTCEIQG WCPTEVDTVE MPVMMEAENF TIFIKNSIRF ENSTTRP00000001952/1-396 ILTGRCVNYS SELRTCEIQG WCPAEVDTVE MPVMMEAENF TIFIKNSIRF 201 250 bmy_17536T0/1-292 PLFNFEKGNL LPNLTAADLK TCRFHPDKAP FCPILRVGDV VKFTGQDFAK ENSBTAP00000039342/1-405 PLFNFEKGNL LPDLTAADVK TCRFHPDRAP FCPILRVGDV VKFAGQDFAK ENSP00000263314/1-397 PLFNFEKGNL LPNLTARDMK TCRFHPDKDP FCPILRVGDV VKFAGQDFAK BACU017236/1-397 PLFNFEKGNL LPSLTAADLK TCRFHPDKAP FCPILRVGDV VKFAGQDFAK ENSTTRP00000001952/1-396 PLFNFEKGNL LPSLTATDLK TCRFHPDKAP FCPILRVGDV VKFAGQNFAK 251 300 bmy_17536T0/1-292 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR ENSBTAP00000039342/1-405 LAQTGGVLGI KIGWACDLDK AWDECVPRYS FTRLDGVSEK SSVSPGYNFR ENSP00000263314/1-397 LARTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR BACU017236/1-397 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR ENSTTRP00000001952/1-396 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR 301 350 bmy_17536T0/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000039342/1-405 FAKYYKMDNG SEYRTLLKAF GIRFDVLVYG DAGKFNIIPT IISSVAAFTS ENSP00000263314/1-397 FAKYYKMENG SEYRTLLKAF GIRFDVLVYG NAGKFNIIPT IISSVAAFTS BACU017236/1-397 FAKYYKTENG SEYRTLLKAF GIRFDVLVYG NAGKFDIIPT IISSVAAFTS ENSTTRP00000001952/1-396 FAKYYKTENG SEYRTLLKAF GIRFDVLVYG NAGKFDIIPT IISSVAAFTS 351 400 bmy_17536T0/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000039342/1-405 VGVGTVLCDI ILLNFLKGAD QYKARKFEEV SETTLRVPAS AHPGDTSDQT ENSP00000263314/1-397 VGVGTVLCDI ILLNFLKGAD QYKAKKFEEV NETTLKIAAL TNPVYPSDQT BACU017236/1-397 VGVGTVLCDI ILLNFLKGAD QYKAKKFEEV NETTLKVTAS ANPVYPSDQT ENSTTRP00000001952/1-396 VGVRTVLCDI ILLNFLKGAD HYKAKKFEEV NETTLKVMAS ANPVYPSDQT 401 450 bmy_17536T0/1-292 ---------- ------ ENSBTAP00000039342/1-405 TEEKQSTDSG AYSIGH ENSP00000263314/1-397 TAEKQSTDSG AFSIGH BACU017236/1-397 TEEKQSTDSG AYSIGH ENSTTRP00000001952/1-396 TEEKQSTDSG AYSIGH