KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:49:29 2014 Check: 00 ..
Name: bmy_17536T0/1-292 Len: 416 Check: 7612 Weight: 1.00
Name: ENSBTAP00000039342/1-405 Len: 416 Check: 9117 Weight: 1.00
Name: ENSP00000263314/1-397 Len: 416 Check: 1862 Weight: 1.00
Name: BACU017236/1-397 Len: 416 Check: 1858 Weight: 1.00
Name: ENSTTRP00000001952/1-396 Len: 416 Check: 8081 Weight: 1.00
//
1 50
bmy_17536T0/1-292 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV
ENSBTAP00000039342/1-405 LLRGHSLSMN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV
ENSP00000263314/1-397 --------MN CISDFFTYET TKSVVVKSWT IGIINRVVQL LIISYFVGWV
BACU017236/1-397 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV
ENSTTRP00000001952/1-396 --------MN CISDFFTYET TKSVVVKSWT IGIINRAVQL LIISYFVGWV
51 100
bmy_17536T0/1-292 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQVGSPYLP
ENSBTAP00000039342/1-405 FLHEKAYQVR DTAIESSVVT KVKGFGRYAN RVMDVSDYVT PPQGTSVFVI
ENSP00000263314/1-397 FLHEKAYQVR DTAIESSVVT KVKGSGLYAN RVMDVSDYVT PPQGTSVFVI
BACU017236/1-397 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQGTSVFVI
ENSTTRP00000001952/1-396 FLHEKAYQVR DTAIESSVVT KVKGFGHYAN RVMDVSDYVT PPQGTSVFVI
101 150
bmy_17536T0/1-292 RGAVQTADGQ APPPQGPVWV LHTPVSPQSE EKFRCVSDSQ CGPERFPGVG
ENSBTAP00000039342/1-405 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CGPERFPGGG
ENSP00000263314/1-397 ITKMIVTENQ M---QGFC-- ------PESE EKYRCVSDSQ CGPERLPGGG
BACU017236/1-397 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CGPERFPGVG
ENSTTRP00000001952/1-396 ITKMIVTENQ M---QGFC-- ------PESE EKFRCVSDSQ CQPERFP-VG
151 200
bmy_17536T0/1-292 ILTGRCVNYS SELRTCEIQG WCPTEVDTVE MPVMMEAENF TIFIKNSIRF
ENSBTAP00000039342/1-405 ILTGRCVNYS SELRTCEIQG WCPAEVDTVE TPVMMEAENF TIFIKNSIRF
ENSP00000263314/1-397 ILTGRCVNYS SVLRTCEIQG WCPTEVDTVE TPIMMEAENF TIFIKNSIRF
BACU017236/1-397 ILTGRCVNYS SELRTCEIQG WCPTEVDTVE MPVMMEAENF TIFIKNSIRF
ENSTTRP00000001952/1-396 ILTGRCVNYS SELRTCEIQG WCPAEVDTVE MPVMMEAENF TIFIKNSIRF
201 250
bmy_17536T0/1-292 PLFNFEKGNL LPNLTAADLK TCRFHPDKAP FCPILRVGDV VKFTGQDFAK
ENSBTAP00000039342/1-405 PLFNFEKGNL LPDLTAADVK TCRFHPDRAP FCPILRVGDV VKFAGQDFAK
ENSP00000263314/1-397 PLFNFEKGNL LPNLTARDMK TCRFHPDKDP FCPILRVGDV VKFAGQDFAK
BACU017236/1-397 PLFNFEKGNL LPSLTAADLK TCRFHPDKAP FCPILRVGDV VKFAGQDFAK
ENSTTRP00000001952/1-396 PLFNFEKGNL LPSLTATDLK TCRFHPDKAP FCPILRVGDV VKFAGQNFAK
251 300
bmy_17536T0/1-292 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR
ENSBTAP00000039342/1-405 LAQTGGVLGI KIGWACDLDK AWDECVPRYS FTRLDGVSEK SSVSPGYNFR
ENSP00000263314/1-397 LARTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR
BACU017236/1-397 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR
ENSTTRP00000001952/1-396 LASTGGVLGI KIGWVCDLDK AWDQCIPKYS FTRLDSVSEK SSVSPGYNFR
301 350
bmy_17536T0/1-292 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000039342/1-405 FAKYYKMDNG SEYRTLLKAF GIRFDVLVYG DAGKFNIIPT IISSVAAFTS
ENSP00000263314/1-397 FAKYYKMENG SEYRTLLKAF GIRFDVLVYG NAGKFNIIPT IISSVAAFTS
BACU017236/1-397 FAKYYKTENG SEYRTLLKAF GIRFDVLVYG NAGKFDIIPT IISSVAAFTS
ENSTTRP00000001952/1-396 FAKYYKTENG SEYRTLLKAF GIRFDVLVYG NAGKFDIIPT IISSVAAFTS
351 400
bmy_17536T0/1-292 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000039342/1-405 VGVGTVLCDI ILLNFLKGAD QYKARKFEEV SETTLRVPAS AHPGDTSDQT
ENSP00000263314/1-397 VGVGTVLCDI ILLNFLKGAD QYKAKKFEEV NETTLKIAAL TNPVYPSDQT
BACU017236/1-397 VGVGTVLCDI ILLNFLKGAD QYKAKKFEEV NETTLKVTAS ANPVYPSDQT
ENSTTRP00000001952/1-396 VGVRTVLCDI ILLNFLKGAD HYKAKKFEEV NETTLKVMAS ANPVYPSDQT
401 450
bmy_17536T0/1-292 ---------- ------
ENSBTAP00000039342/1-405 TEEKQSTDSG AYSIGH
ENSP00000263314/1-397 TAEKQSTDSG AFSIGH
BACU017236/1-397 TEEKQSTDSG AYSIGH
ENSTTRP00000001952/1-396 TEEKQSTDSG AYSIGH