KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:49:29 2014 Check: 00 .. Name: ENSP00000379401/1-279 Len: 279 Check: 2633 Weight: 1.00 Name: ENSBTAP00000039362/1-277 Len: 279 Check: 5569 Weight: 1.00 Name: bmy_18966T0/1-146 Len: 279 Check: 6093 Weight: 1.00 Name: ENSTTRP00000007047/1-279 Len: 279 Check: 1810 Weight: 1.00 // 1 50 ENSP00000379401/1-279 MKIIILLGFL GATLSAPLIP QRLMSASNSN ELLLNLNNGQ LLPLQLQGPL ENSBTAP00000039362/1-277 MRTLILLGIL GATMSAPLIP QHLMSASNSN ELLLNLNNAQ LRPLQLQGPF bmy_18966T0/1-146 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007047/1-279 MKTIIPLGIL GATISAPLIP QCLMSASNSN ELLLNLNNAQ LQPLRLQDPF 51 100 ENSP00000379401/1-279 NSWIPPFSGI LQQQQQAQIP GLSQFSLSAL DQFAGLLPNQ IPLTGEASFA ENSBTAP00000039362/1-277 NSWFPPFPGI LQQQQQNQVP GLSPFSLSTR EWFAGLVPNQ IFVPGQVSFA bmy_18966T0/1-146 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007047/1-279 NSWIPPFPGI LQQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000379401/1-279 QGAQAGQVDP LQLQTPPQTQ PGPSHVMPYV FSFKMPQEQG QMFQYYPVYM ENSBTAP00000039362/1-277 QGTQAGQLDP SQPQTPQQTQ RGPKNVMPSV F-FKMPQEQA QMLQYYPVYM bmy_18966T0/1-146 ---------- ---------- ------MPSV FSFKMPHEQA QMPLYYPVYV ENSTTRP00000007047/1-279 XXXXXXXXXX XXXXXXXXXX XXXXXVVPSV FSFKMPRELA QMLLYYPVYM 151 200 ENSP00000379401/1-279 VLPWEQPQQT VPRSPQQTRQ QQYEEQIPFY AQFGYIPQLA EPAISGGQQQ ENSBTAP00000039362/1-277 FLPWEQPQQT VAQSPPQTRE QLFEEQMPFY TEFGYIPQQV EPVMPVEQQQ bmy_18966T0/1-146 LLPWGQPQQT VAQSPPQTGQ LLFEEQMPFY TEFEYIPQQA EPVMPRGQQQ ENSTTRP00000007047/1-279 LLPWDQPQQT VAQSPPQTRQ LLFEEQMPFC TEFGYIPRQA EPVMPRGQQQ 201 250 ENSP00000379401/1-279 LAFDPQLGTA PEIAVMSTGE EIPYLQKEAI NFRHDSAGVF MPSTSPKPST ENSBTAP00000039362/1-277 PVFDPFLGTA PEIAAMPA-E VSPYLQKEMI NFQHTNAGIF IPSTSQKPST bmy_18966T0/1-146 PAFDPFLGTA PEIAVMPAGG VSPYLQKEMI NFKHANAGIF IPSTSPKPST ENSTTRP00000007047/1-279 PAFDPFLGTA PDIAVMPAGG VSPYLQKKMI NFKHANAGIF IPSTSQKPST 251 300 ENSP00000379401/1-279 TNVFTSAVDQ TITPELPEEK DKTDSLREP ENSBTAP00000039362/1-277 TIFFTSAVDP IITRELTEKK AKTDSLKEP bmy_18966T0/1-146 TNFFTSAMDP TITPELMEKK VE------- ENSTTRP00000007047/1-279 TNFFTSAIDS TITPELMEKK AKTNSLKEP