KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:30 2014 Check: 00 .. Name: ENSBTAP00000039368/1-1007 Len: 1007 Check: 9577 Weight: 1.00 Name: BACU016942/1-610 Len: 1007 Check: 1751 Weight: 1.00 Name: ENSP00000358309/1-998 Len: 1007 Check: 3909 Weight: 1.00 Name: ENSTTRP00000015230/1-998 Len: 1007 Check: 5386 Weight: 1.00 Name: bmy_00500T0/1-544 Len: 1007 Check: 8948 Weight: 1.00 // 1 50 ENSBTAP00000039368/1-1007 MVFQTRHPSW IILCYIWLLH FAHTGEAQAA KEVLLLDSKA QQTELEWISS BACU016942/1-610 MVFQTRHPSW IILCYIWLLR FAHTGEAQAA KEVLLLDSKA QQTELEWISS ENSP00000358309/1-998 MVFQTRYPSW IILCYIWLLR FAHTGEAQAA KEVLLLDSKA QQTELEWISS ENSTTRP00000015230/1-998 MVFQTRHPSW IILCYIWLLR FAHTVEAQAA KEVLLLDSKA QQTELEWISS bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000039368/1-1007 PPNGWEEISG LDENYTPIRT YQVCQVMEPN QNNWLRTNWI SKGNAQRIFV BACU016942/1-610 PPNGWEEISG LDENYTPIRT YQVCQVMEPN QNNWLRTNWI SKGNAQRIFV ENSP00000358309/1-998 PPNGWEEISG LDENYTPIRT YQVCQVMEPN QNNWLRTNWI SKGNAQRIFV ENSTTRP00000015230/1-998 PPNGWEEISG LDENYTPIRT YQVCQVMEPN QNNWLRTNWI SKGNAQRIFV bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000039368/1-1007 ELKFTLRDCN SLPGVLGTCK ETFNLYYYET DYDTGRNIRE NLYVKIDTIA BACU016942/1-610 ELKFTLRDCN SLPGVLGTCK ETFNLYYYET DYDTGRNIRE NLYVKIDTIA ENSP00000358309/1-998 ELKFTLRDCN SLPGVLGTCK ETFNLYYYET DYDTGRNIRE NLYVKIDTIA ENSTTRP00000015230/1-998 ELKFTLRDCN SLPGVLGTCK ETFNLYYYET DYDTGRNIRE NLYVKIDTIA bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000039368/1-1007 ADESFTQGDL GERKMKLNTE VREIGPLSKK GFYLAFQDVG ACIALVSVKV BACU016942/1-610 ADESFTQGDL GERKMKLNTE VREIGPLSKK GFYLAFQDVG ACIALVSVKV ENSP00000358309/1-998 ADESFTQGDL GERKMKLNTE VREIGPLSKK GFYLAFQDVG ACIALVSVKV ENSTTRP00000015230/1-998 ADESFTQGDL GERKMKLNTE VREIGPLSKK GFYLAFQDVG ACIALVSVKV bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000039368/1-1007 YYKKCWSIIE NLAIFPDTVT GSEFSSLVEV RGTCVSSAEE EAENSPRMHC BACU016942/1-610 YYKKCWSIIE NLAVFPDTVT GSEFSSLVEV RGTCVSSAEE EAENSPRMHC ENSP00000358309/1-998 YYKKCWSIIE NLAIFPDTVT GSEFSSLVEV RGTCVSSAEE EAENAPRMHC ENSTTRP00000015230/1-998 YYKKCWSIIE NLAVFPDTVT GSEFSSLVEV RGTCVSSAEE EAENSPRMHC bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000039368/1-1007 SAEGEWLVPI GKCICKAGFQ QKGDTCEPCG RGFYKSSSQD LQCSRCPTHS BACU016942/1-610 SAEGEWLVPI GKCICKAGYQ QKGDTCEPCG RGFYKSSSQD LQCSRCPTHS ENSP00000358309/1-998 SAEGEWLVPI GKCICKAGYQ QKGDTCEPCG RGFYKSSSQD LQCSRCPTHS ENSTTRP00000015230/1-998 SAEGEWLVPI GKCICKAGYQ QKGDTCEPCG RGFYKSSSQD LQCSRCPTHS bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000039368/1-1007 FSDKEGSSRC DCEDGYYRAP SDPPYVACTR PPSAPQNLIF NINQTTVSLE BACU016942/1-610 FSDKEGSSRC DCEDGYYRAP SDPPYVACTR PPSAPQNLIF NINQTTVSLE ENSP00000358309/1-998 FSDKEGSSRC ECEDGYYRAP SDPPYVACTR PPSAPQNLIF NINQTTVSLE ENSTTRP00000015230/1-998 FSDKEGSSRC DCDDGYYRAP SDPPYVACTR PPSAPQNLIF NINQTTVSLE bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000039368/1-1007 WSPPADNGGR NDVTYRILCK RCSWEQGECV PCGSNIGYMP QQTGLEDNYV BACU016942/1-610 WSPPADNGGR NDVTYRILCK RCSWEQGECV PCGSSIGYMP QQTGLEDNYV ENSP00000358309/1-998 WSPPADNGGR NDVTYRILCK RCSWEQGECV PCGSNIGYMP QQTGLEDNYV ENSTTRP00000015230/1-998 WSPPADNGGR NDVTYRILCK RCSWEQGECV PCGSSIGYMP QQTGLEDNYV bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000039368/1-1007 TVMDLLAHAN YTFEVEAVNG VSDLSRSQRL FAAVSVTTGQ AAPSQVSGVM BACU016942/1-610 TVMDLLAHAN YTFEVEAVNG VSDLSRSQRL FAAVSVTTGQ AAPSQVSGVM ENSP00000358309/1-998 TVMDLLAHAN YTFEVEAVNG VSDLSRSQRL FAAVSITTGQ AAPSQVSGVM ENSTTRP00000015230/1-998 TVMDLLAHAN YTFEVEAVNG VSDLSRSQRL FAAVSVTTGQ AAPSQVSGVM bmy_00500T0/1-544 ---------- ---------- ---------- ---------- ---------M 451 500 ENSBTAP00000039368/1-1007 KERVLQRSVE LSWQEPEHPN GVITEYEIKY YEKDQRERTY STLKTKSTSA BACU016942/1-610 KERVLQRSVE LSWQEPEHPN GVITEYEIKY YEKDQRERTY STLKTKSTSA ENSP00000358309/1-998 KERVLQRSVE LSWQEPEHPN GVITEYEIKY YEKDQRERTY STVKTKSTSA ENSTTRP00000015230/1-998 KERVLQRSVE LSWQEPEHPN GVITEYEIKY YEKDQRERTY STLKTKSTSA bmy_00500T0/1-544 KERVLQRSVE LSWQEPEHPN GVITEYEIKY YEKDQRERTY STLKTKSTSA 501 550 ENSBTAP00000039368/1-1007 SINNLKPGTV YVFQIRAFTA AGYGNYSPRL DVATLEEATG KMFEATAVSS BACU016942/1-610 SINNLKPGTV YVFQIRAFTA AGYGNYSPRL DVATLEEATG KMFEATAVSS ENSP00000358309/1-998 SINNLKPGTV YVFQIRAFTA AGYGNYSPRL DVATLEEATG KMFEATAVSS ENSTTRP00000015230/1-998 SINNLKPGTV YVFQIRAFTA AGYGNYSPRL DVATLEEATG KMFEATAVSS bmy_00500T0/1-544 SINNLKPGTV YVFQIRAFTA AGYGNYSPRL DVATLEEAT- ----ATAVSS 551 600 ENSBTAP00000039368/1-1007 EQNPVIIIAV VAVAGTIILV FMVFGFIIGR RHCGYSKADQ EGDEELYFHF BACU016942/1-610 EQNPVIIIAV VAVAGTIILV FMVFGFIIGR RHCGYSKADQ EGDEELYFH- ENSP00000358309/1-998 EQNPVIIIAV VAVAGTIILV FMVFGFIIGR RHCGYSKADQ EGDEELYFHF ENSTTRP00000015230/1-998 EQNPVIIIAV VAVAGTIILV FMVFGFIIGR RHCGYSKADQ EGDEELYFHF bmy_00500T0/1-544 EQNPVIIIAV VAVAGTIILV FMVFGFIIGR RHCGYSKADQ EGDEELYFHF 601 650 ENSBTAP00000039368/1-1007 KFPGTKTYID PETYEDPNRA VHQFAKELDA SCIKIERVIG AGEFGEVCSG BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 KFPGTKTYID PETYEDPNRA VHQFAKELDA SCIKIERVIG AGEFGEVCSG ENSTTRP00000015230/1-998 KFPGTKTYID PETYEDPNRA VHQFAKELDA SCIKIERVIG AGEFGEVCSG bmy_00500T0/1-544 KFPGTKTYID PETYEDPNRA VHQFAKELDA SCIKIERVIG AGEFGEVCSG 651 700 ENSBTAP00000039368/1-1007 RLKLPGKRDV AVAIKTLKVG YTEKQRRDFL CEASIMGQFD HPNVVHLEGV BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 RLKLPGKRDV AVAIKTLKVG YTEKQRRDFL CEASIMGQFD HPNVVHLEGV ENSTTRP00000015230/1-998 RLKLPGKRDV AVAIKTLKVG YTEKQRRDFL CEASIMGQFD HPNVVHLEGV bmy_00500T0/1-544 RLKLPGKRDV AVAIKTLKVG YTEKQRRDFL CEASIMGQFD HPNVVHLEGV 701 750 ENSBTAP00000039368/1-1007 VTRGKPVMIV IEFMENGALD AFLRKHDGQF TVIQLVGMLR GIAAGMRYLA BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 VTRGKPVMIV IEFMENGALD AFLRKHDGQF TVIQLVGMLR GIAAGMRYLA ENSTTRP00000015230/1-998 VTRGKPVMIV IEFMENGALD AFLRKHDGQF TVIQLVGMLR GIAAGMRYLA bmy_00500T0/1-544 VTRGKPVMIV IEFMENGALD AFLRKHDGQF TVIQLVGMLR GIAAGMRYLA 751 800 ENSBTAP00000039368/1-1007 DMGYVHRDLA ARNILVNSNL VCKVSDFGLS RVIEDDPEAV YTTTVRKSLL BACU016942/1-610 ---------- --SLVTNEHL SVL------- ---------- ---------- ENSP00000358309/1-998 DMGYVHRDLA ARNILVNSNL VCKVSDFGLS RVIEDDPEAV YTTTGGK--- ENSTTRP00000015230/1-998 DMGYVHRDLA ARNILVNSNL VCKVSDFGLS RVIEDDPEAV YTTTGGK--- bmy_00500T0/1-544 DMGYVHRDLA ARNILVNSNL VCKVSDFGLS RVIEDDPEAV YTTTGGK--- 801 850 ENSBTAP00000039368/1-1007 LHLFIFLPIF LPRKQALQYR KFTSASDVWS YGIVMWEVMS YGERPYWDMS BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 ------IPVR WTAPEAIQYR KFTSASDVWS YGIVMWEVMS YGERPYWDMS ENSTTRP00000015230/1-998 ------IPVR WTAPEAIQYR KFTSASDVWS YGIVMWEVMS YGERPYWDMS bmy_00500T0/1-544 ------IPVR WTAPEAIQYR KFTSASDVWS YGIVMWEVMS YGERPYWDMS 851 900 ENSBTAP00000039368/1-1007 NQDVIKAIEE GYRLPAPMDC PAGLHQLMLD CWQKERAERP KFEQIVGILD BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 NQDVIKAIEE GYRLPAPMDC PAGLHQLMLD CWQKERAERP KFEQIVGILD ENSTTRP00000015230/1-998 NQDVIKAIKE GYRLPAPMDC PAGLHQLMLD CWQKERAERP KFEQIVGILD bmy_00500T0/1-544 NQDVIKAIEE GYRLPAPMDC PAGLHQLMLD CWQKERAERP KFEQIVGILD 901 950 ENSBTAP00000039368/1-1007 KMIRNPNSLK TPLGTCSRPI SPLLDQNTPD FTTFCSVGEW LQAIKMERYK BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 KMIRNPNSLK TPLGTCSRPI SPLLDQNTPD FTTFCSVGEW LQAIKMERYK ENSTTRP00000015230/1-998 KMIRNPNSLK TPLGTCSRPI SPLLDQNTPD FTAFCSVGEW LQAIKMERYK bmy_00500T0/1-544 KMIRNPNSLK TPLGTCSRPI SPLLDQNTPD FTAFCSVGEW LQAIKMERYK 951 1000 ENSBTAP00000039368/1-1007 DNFTAAGYNS LESVARMTIE DVMSLGITLV GHQKKIMSSI QTMRAQMLHL BACU016942/1-610 ---------- ---------- ---------- ---------- ---------- ENSP00000358309/1-998 DNFTAAGYNS LESVARMTIE DVMSLGITLV GHQKKIMSSI QTMRAQMLHL ENSTTRP00000015230/1-998 DNFTAAGYNS LESVARMTIE DVMSLGITLV GHQKKIMSSI QTMRAQMLHL bmy_00500T0/1-544 DNFTAAGYNS LESVARMTIE DVMSLGITLV GHQKKIMSSI QTMRAQMLHL 1001 1050 ENSBTAP00000039368/1-1007 HGTGIQV BACU016942/1-610 ------- ENSP00000358309/1-998 HGTGIQV ENSTTRP00000015230/1-998 HGTGIQV bmy_00500T0/1-544 HGTGIQV