KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:49:31 2014 Check: 00 .. Name: ENSP00000309606/1-720 Len: 726 Check: 9163 Weight: 1.00 Name: ENSBTAP00000039420/1-719 Len: 726 Check: 4459 Weight: 1.00 Name: bmy_04115T0/1-700 Len: 726 Check: 6101 Weight: 1.00 Name: BACU008950/1-722 Len: 726 Check: 9755 Weight: 1.00 // 1 50 ENSP00000309606/1-720 MEEAEELLLE GKKALQLARE PRLGLDLGWN PSGEGCTQGL KDVPPEPTRD ENSBTAP00000039420/1-719 MEATEELLLG RGR-LQLAPD PRLGPESGWS PPSEGCAPGL KDVPPGPTRA bmy_04115T0/1-700 MEEAKELPLE WER-LQFAPD PRLGPDSGWS LSREGCAQEL KDFSPGPTRV BACU008950/1-722 MEEAKELPLE WER-LQFAPD PRLGPDSGWG PSREGCAQEL KDFSPGPTRA 51 100 ENSP00000309606/1-720 ILALKSLPRG LALGPSLAKE QRLGVWCVGD PLQPGLLWGP LEEESASKEK ENSBTAP00000039420/1-719 ILALKSLPRG LALGPSLTAE QRLGVWCVGE PLQPGLLWGP LEEGSVSEQK bmy_04115T0/1-700 ILALKSLPRG LALGPSLIKE KRLGVWCVGE PLQPGLLWGP LEEESVSEQK BACU008950/1-722 ILALKSLPRG LALGPSLTKE QRLGVWCVGE PLQPGLLWGP LEEESVSEQK 101 150 ENSP00000309606/1-720 GEGVKPRQEE NLSLGPWGDV CACEQSSGWT SLVQRGRLES EGNVAPVRIS ENSBTAP00000039420/1-719 GNGVEPKRKE DVSLGSWGDV CACEQSAGWT SFVQLGRLEG EGNVAPVRIG bmy_04115T0/1-700 GHGVKTKQKE DVSLGPWGDV CACEQSSGWT SLVQRGRLEG EGNVAPVRIS BACU008950/1-722 GHGVKTKQKE DVSLGPWGDV CACEQSSGWT SLVQRGRLEG EGNVAPVRIS 151 200 ENSP00000309606/1-720 ERLHLQVYQL VLPGSELLLW PQPSSEGPSL TQPGLDKEAA VAVVTEVESA ENSBTAP00000039420/1-719 ERLHLRVSRR VLPGFELRLW PQLPSEGPSP PQPRLEEASS AAVVTEVESA bmy_04115T0/1-700 ERLHLQVYRV VLPGFELLMW PQPPSEGLSP TQPRLEEEAS LAVVTEVESA BACU008950/1-722 ERLHLQVYRV VLPGFELLIW PQPPSEGLSP TQPGLEEEAS LAVVTDVESA 201 250 ENSP00000309606/1-720 VQQEVASPGE DAAEPCIDPG SQSPSGIQAE NMVSPGLKFP TQDRISKDSQ ENSBTAP00000039420/1-719 VRQEVACPGE DAAEPCPDPG HQSPPSIQAE SVVSPGLTPQ TQPPVPKENQ bmy_04115T0/1-700 ---------- ---------- --SPTRIQA- --VSPGLKPQ IQDQVSKESQ BACU008950/1-722 VQQEVASPGE DAAEPCTDPG YQSPPRIQA- --VSPGLKPQ IQDQVSKESQ 251 300 ENSP00000309606/1-720 PLGPLLQDGD VDEECPAQAQ MPPELQSNSA TQQDPDGSGA SFSSSARGTQ ENSBTAP00000039420/1-719 PLGPLPADDS VDEEDPPQTQ TPPEPQSSSA PQQGPARGEA SSSSSDRAPQ bmy_04115T0/1-700 PLGPLPQDGR VDEEDPPQTQ MPPEPQSSST PQQGPESSEA SSSSSARGPQ BACU008950/1-722 PQGPLPQDGR VDEEDPPQTQ MPPEPQSSST PQQGPESSEA SSSSSARGPQ 301 350 ENSP00000309606/1-720 PHGYLAKKLH SPSDQCPPRA KTPEPGAQQS ------GFPT LSRSPPGPAG ENSBTAP00000039420/1-719 LCAHLVKKLR SPSGQHPPRA KTSEPGAQAT GEPQRPGFPA RLRSPPGPAG bmy_04115T0/1-700 LRAYLVKKLR SPSDQRPPRA KTSEPGARQS GEQQHPGFPA CLRSAPGPVG BACU008950/1-722 LHAYLVKKLR SPSDQRPPRA KTSEPGAWQS GEQQHPGFPA CLRSAPGPVG 351 400 ENSP00000309606/1-720 SSPKQGRRYR CGECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE ENSBTAP00000039420/1-719 GSPKQGRRYR CGECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE bmy_04115T0/1-700 GSPKRGRRYR CAECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE BACU008950/1-722 GSPKRGRRYR CAECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE 401 450 ENSP00000309606/1-720 SFKAHMLGHR GVRPFPCPQC DKAYGTQRDL KEHQVVHSGA RPFACDQCGK ENSBTAP00000039420/1-719 SFRAHTLGHR GVRPFPCPQC DKAYGTRRDL REHQVVHSGA RPFTCEQCGK bmy_04115T0/1-700 SFKAHMLGHR GVRPFPCPQC TKAYGTRRDL REHQVVHSGA RPFACDQCGK BACU008950/1-722 SFKAHMLGHR GVRPFPCPQC TKAYGTRRDL REHQVVHSGA RPFACDQCGK 451 500 ENSP00000309606/1-720 AFARRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK ENSBTAP00000039420/1-719 AFARRPSLRL HRKTHQAAAA PTPCPCPVCG RPLASQGSLR NHMRLHTGEK bmy_04115T0/1-700 AFTRRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK BACU008950/1-722 AFARRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK 501 550 ENSP00000309606/1-720 PFLCPHCGRA FRQRGNLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI ENSBTAP00000039420/1-719 PFPCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QRPELRRHLI bmy_04115T0/1-700 PFLCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI BACU008950/1-722 PFLCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI 551 600 ENSP00000309606/1-720 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL ENSBTAP00000039420/1-719 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL bmy_04115T0/1-700 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL BACU008950/1-722 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL 601 650 ENSP00000309606/1-720 RRHLKSHLED KPYRCPTCGM GYTLPQSLRR HQLSHRPEAP CSPPSVPSAA ENSBTAP00000039420/1-719 RRHLKSHLAD KPHRCPTCGM GYALLQSLRR HQLSHQPGAP ASLPCEPPAT bmy_04115T0/1-700 RRHLKSHLAD KPYRCPTCGM GYTLLQSLKR HQLSHQPGAP SSPPCVPPAT BACU008950/1-722 RRHLKSHLAD KPYRCPTCGM GYTLLQSLKR HQLSHQPGAP SSPPCVPPAT 651 700 ENSP00000309606/1-720 SEPTVVLLQA EPQLLDTHRE EEVSPARDVV EVTISESQEK CFVVPEEPDA ENSBTAP00000039420/1-719 SEPTVVLLQ- -----DAGSE GDGTPARDIF EVTISQSQEK CFVAPEEPGP bmy_04115T0/1-700 SEPTVVLLQT EPELLDTCSE RGGSPAPDVF EVTLSESQDK CFVVPEEPGP BACU008950/1-722 SEPTVVLLQT EPELLDTCSE RGGSPAPDVF EVTLSESQDK CFVVPEEPGP 701 750 ENSP00000309606/1-720 APSLVLIHKD MGLGAWAEVV EVEMGT ENSBTAP00000039420/1-719 APGLVLIHKD LGFSTWAEVV EVETGS bmy_04115T0/1-700 APSLVLIHKD VGFSTWAEVV EVETGT BACU008950/1-722 APSLVLIHKD VGFSTWAEVV EVETGT