KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:49:31 2014 Check: 00 ..
Name: ENSP00000309606/1-720 Len: 726 Check: 9163 Weight: 1.00
Name: ENSBTAP00000039420/1-719 Len: 726 Check: 4459 Weight: 1.00
Name: bmy_04115T0/1-700 Len: 726 Check: 6101 Weight: 1.00
Name: BACU008950/1-722 Len: 726 Check: 9755 Weight: 1.00
//
1 50
ENSP00000309606/1-720 MEEAEELLLE GKKALQLARE PRLGLDLGWN PSGEGCTQGL KDVPPEPTRD
ENSBTAP00000039420/1-719 MEATEELLLG RGR-LQLAPD PRLGPESGWS PPSEGCAPGL KDVPPGPTRA
bmy_04115T0/1-700 MEEAKELPLE WER-LQFAPD PRLGPDSGWS LSREGCAQEL KDFSPGPTRV
BACU008950/1-722 MEEAKELPLE WER-LQFAPD PRLGPDSGWG PSREGCAQEL KDFSPGPTRA
51 100
ENSP00000309606/1-720 ILALKSLPRG LALGPSLAKE QRLGVWCVGD PLQPGLLWGP LEEESASKEK
ENSBTAP00000039420/1-719 ILALKSLPRG LALGPSLTAE QRLGVWCVGE PLQPGLLWGP LEEGSVSEQK
bmy_04115T0/1-700 ILALKSLPRG LALGPSLIKE KRLGVWCVGE PLQPGLLWGP LEEESVSEQK
BACU008950/1-722 ILALKSLPRG LALGPSLTKE QRLGVWCVGE PLQPGLLWGP LEEESVSEQK
101 150
ENSP00000309606/1-720 GEGVKPRQEE NLSLGPWGDV CACEQSSGWT SLVQRGRLES EGNVAPVRIS
ENSBTAP00000039420/1-719 GNGVEPKRKE DVSLGSWGDV CACEQSAGWT SFVQLGRLEG EGNVAPVRIG
bmy_04115T0/1-700 GHGVKTKQKE DVSLGPWGDV CACEQSSGWT SLVQRGRLEG EGNVAPVRIS
BACU008950/1-722 GHGVKTKQKE DVSLGPWGDV CACEQSSGWT SLVQRGRLEG EGNVAPVRIS
151 200
ENSP00000309606/1-720 ERLHLQVYQL VLPGSELLLW PQPSSEGPSL TQPGLDKEAA VAVVTEVESA
ENSBTAP00000039420/1-719 ERLHLRVSRR VLPGFELRLW PQLPSEGPSP PQPRLEEASS AAVVTEVESA
bmy_04115T0/1-700 ERLHLQVYRV VLPGFELLMW PQPPSEGLSP TQPRLEEEAS LAVVTEVESA
BACU008950/1-722 ERLHLQVYRV VLPGFELLIW PQPPSEGLSP TQPGLEEEAS LAVVTDVESA
201 250
ENSP00000309606/1-720 VQQEVASPGE DAAEPCIDPG SQSPSGIQAE NMVSPGLKFP TQDRISKDSQ
ENSBTAP00000039420/1-719 VRQEVACPGE DAAEPCPDPG HQSPPSIQAE SVVSPGLTPQ TQPPVPKENQ
bmy_04115T0/1-700 ---------- ---------- --SPTRIQA- --VSPGLKPQ IQDQVSKESQ
BACU008950/1-722 VQQEVASPGE DAAEPCTDPG YQSPPRIQA- --VSPGLKPQ IQDQVSKESQ
251 300
ENSP00000309606/1-720 PLGPLLQDGD VDEECPAQAQ MPPELQSNSA TQQDPDGSGA SFSSSARGTQ
ENSBTAP00000039420/1-719 PLGPLPADDS VDEEDPPQTQ TPPEPQSSSA PQQGPARGEA SSSSSDRAPQ
bmy_04115T0/1-700 PLGPLPQDGR VDEEDPPQTQ MPPEPQSSST PQQGPESSEA SSSSSARGPQ
BACU008950/1-722 PQGPLPQDGR VDEEDPPQTQ MPPEPQSSST PQQGPESSEA SSSSSARGPQ
301 350
ENSP00000309606/1-720 PHGYLAKKLH SPSDQCPPRA KTPEPGAQQS ------GFPT LSRSPPGPAG
ENSBTAP00000039420/1-719 LCAHLVKKLR SPSGQHPPRA KTSEPGAQAT GEPQRPGFPA RLRSPPGPAG
bmy_04115T0/1-700 LRAYLVKKLR SPSDQRPPRA KTSEPGARQS GEQQHPGFPA CLRSAPGPVG
BACU008950/1-722 LHAYLVKKLR SPSDQRPPRA KTSEPGAWQS GEQQHPGFPA CLRSAPGPVG
351 400
ENSP00000309606/1-720 SSPKQGRRYR CGECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE
ENSBTAP00000039420/1-719 GSPKQGRRYR CGECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE
bmy_04115T0/1-700 GSPKRGRRYR CAECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE
BACU008950/1-722 GSPKRGRRYR CAECGKAFLQ LCHLKKHAFV HTGHKPFLCT ECGKSYSSEE
401 450
ENSP00000309606/1-720 SFKAHMLGHR GVRPFPCPQC DKAYGTQRDL KEHQVVHSGA RPFACDQCGK
ENSBTAP00000039420/1-719 SFRAHTLGHR GVRPFPCPQC DKAYGTRRDL REHQVVHSGA RPFTCEQCGK
bmy_04115T0/1-700 SFKAHMLGHR GVRPFPCPQC TKAYGTRRDL REHQVVHSGA RPFACDQCGK
BACU008950/1-722 SFKAHMLGHR GVRPFPCPQC TKAYGTRRDL REHQVVHSGA RPFACDQCGK
451 500
ENSP00000309606/1-720 AFARRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK
ENSBTAP00000039420/1-719 AFARRPSLRL HRKTHQAAAA PTPCPCPVCG RPLASQGSLR NHMRLHTGEK
bmy_04115T0/1-700 AFTRRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK
BACU008950/1-722 AFARRPSLRL HRKTHQVPAA PAPCPCPVCG RPLANQGSLR NHMRLHTGEK
501 550
ENSP00000309606/1-720 PFLCPHCGRA FRQRGNLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI
ENSBTAP00000039420/1-719 PFPCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QRPELRRHLI
bmy_04115T0/1-700 PFLCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI
BACU008950/1-722 PFLCPHCGRA FRQRGSLRGH LRLHTGERPY RCPHCADAFP QLPELRRHLI
551 600
ENSP00000309606/1-720 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL
ENSBTAP00000039420/1-719 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL
bmy_04115T0/1-700 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL
BACU008950/1-722 SHTGEAHLCP VCGKALRDPH TLRAHERLHS GERPFPCPQC GRAYTLATKL
601 650
ENSP00000309606/1-720 RRHLKSHLED KPYRCPTCGM GYTLPQSLRR HQLSHRPEAP CSPPSVPSAA
ENSBTAP00000039420/1-719 RRHLKSHLAD KPHRCPTCGM GYALLQSLRR HQLSHQPGAP ASLPCEPPAT
bmy_04115T0/1-700 RRHLKSHLAD KPYRCPTCGM GYTLLQSLKR HQLSHQPGAP SSPPCVPPAT
BACU008950/1-722 RRHLKSHLAD KPYRCPTCGM GYTLLQSLKR HQLSHQPGAP SSPPCVPPAT
651 700
ENSP00000309606/1-720 SEPTVVLLQA EPQLLDTHRE EEVSPARDVV EVTISESQEK CFVVPEEPDA
ENSBTAP00000039420/1-719 SEPTVVLLQ- -----DAGSE GDGTPARDIF EVTISQSQEK CFVAPEEPGP
bmy_04115T0/1-700 SEPTVVLLQT EPELLDTCSE RGGSPAPDVF EVTLSESQDK CFVVPEEPGP
BACU008950/1-722 SEPTVVLLQT EPELLDTCSE RGGSPAPDVF EVTLSESQDK CFVVPEEPGP
701 750
ENSP00000309606/1-720 APSLVLIHKD MGLGAWAEVV EVEMGT
ENSBTAP00000039420/1-719 APGLVLIHKD LGFSTWAEVV EVETGS
bmy_04115T0/1-700 APSLVLIHKD VGFSTWAEVV EVETGT
BACU008950/1-722 APSLVLIHKD VGFSTWAEVV EVETGT