KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:34 2014 Check: 00 .. Name: ENSP00000308620/1-527 Len: 527 Check: 3899 Weight: 1.00 Name: ENSBTAP00000039446/1-527 Len: 527 Check: 2854 Weight: 1.00 Name: ENSTTRP00000013341/1-527 Len: 527 Check: 368 Weight: 1.00 Name: BACU008912/1-523 Len: 527 Check: 103 Weight: 1.00 Name: bmy_12111T0/1-523 Len: 527 Check: 440 Weight: 1.00 // 1 50 ENSP00000308620/1-527 MSLQMVTVSN NIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHLDV ENSBTAP00000039446/1-527 MSLQMVTVGN SIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHFEV ENSTTRP00000013341/1-527 MSLQMVTVGN NIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHFDI BACU008912/1-523 ----MVTVGN NIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHFDV bmy_12111T0/1-523 ----MVTVGN NIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHFDV 51 100 ENSP00000308620/1-527 KHNHVKLKPT IFSKDSCYLP PLRYPATCTF KGSLESEKHQ YIIHGGKTPN ENSBTAP00000039446/1-527 KHNHLKLKPA VFSKDSCYLP PLRYPATCTF SGNLESEKHQ YIIHGGKTPN ENSTTRP00000013341/1-527 KHNHLKLKPA VFSKDSCYLP PLRYPATCTF KGNLESEKHQ YIIHGGKTPN BACU008912/1-523 KHNHLKLKPA VFSKDSCYLP PLRYPATCTF KGNLESENHQ YIIHGGKTPN bmy_12111T0/1-523 KHNHLKLKPA VFSKDSCYLP PLRYPATCTF KGNLESEKHQ YIIHGGKTPN 101 150 ENSP00000308620/1-527 NEVSDKIYVM SIVCKNNKKV TFRCTEKDLV GDVPEARYGH SINVVYSRGK ENSBTAP00000039446/1-527 NELSDKIYVM SVVSKNNKKV TFRCTEKDLV GDIPEGRYGH SIDVVYSRGK ENSTTRP00000013341/1-527 NELSDKIYIM SVVCKNNKKV TFRCTEKDLV GDVPEGRYGH SIDVVYSRGK BACU008912/1-523 NELSDKIYIM SVVCKNNKKV TFRCTEKDLV GDVPEGRYGH SIDVVYSRGK bmy_12111T0/1-523 NELSDKIYIM SVVCKNNKKV TFCCTEKDLV GDVPEGRYGH SIDVVYSRGK 151 200 ENSP00000308620/1-527 SMGVLFGGRS YMPSTHRTTE KWNSVADCLP CVFLVDFEFG CATSYILPEL ENSBTAP00000039446/1-527 SMGVLFGGRS YIPSAQRTTE KWNSVADCLP HVFLVDFEFG CSTSYILPEL ENSTTRP00000013341/1-527 SVGVLFGGRS YIPSAQRTTE KWNSVADCLP HVFLVDFEFG CSTSYILPEL BACU008912/1-523 SVGVLFGGRS YIPSAQRTTE KWNSVADCLP HVFLVDFEFG CSTSYILPEL bmy_12111T0/1-523 SVGVLFGGRS YIPSAQRTTE KWNSVADCLP HVFLVDFEFG CSTSYILPEL 201 250 ENSP00000308620/1-527 QDGLSFHVSI AKNDTIYILG GHSLANNIRP ANLYRIRVDL PLGSPAVNCT ENSBTAP00000039446/1-527 QDGLSFHVSI ARNDTVYILG GHSLANNIRP ANLYRIRVDL PLGSPAVECT ENSTTRP00000013341/1-527 QDGLSFHVSI ARNDTIYILG GHSLANNIRP ANLYRIRVDL PLGSPAVNCT BACU008912/1-523 QDGLSFHVSI ARNDTVYILG GHSLANNIRP ANLYRIRVDL PLGSPAVNCT bmy_12111T0/1-523 QDGLSFHVSI ARNDTVYILG GHSLANNXRP ANLYRIRVDL PLGSPAVNCT 251 300 ENSP00000308620/1-527 VLPGGISVSS AILTQTNNDE FVIVGGYQLE NQKRMICNII SLEDNKIEIR ENSBTAP00000039446/1-527 VLPGGISVSS AILTQISNDE FVIVGGYQLE NQKRMVCNII SFKDNKIDIL ENSTTRP00000013341/1-527 VMPGGISVSS AILTQISNDE FVIVGGYQLE NQKRMVCNII SFEDNKMEIR BACU008912/1-523 VTPRGISVSS AILTQISNDE FVIIGGYQLE NQKRMVCNII SFEDNKMEIR bmy_12111T0/1-523 VMPGGISVSS AILTQISNDE FVIIGGYQLE NQKRMVCNII SFEDNKMEIR 301 350 ENSP00000308620/1-527 EMETPDWTPD IKHSKIWFGS NMGNGTVFLG IPGDNKQVVS EGFYFYMLKC ENSBTAP00000039446/1-527 EMETPDWTPD IKHSKIWFGS NMGNGTVFLG IPGDNKQAVS EAFYFYTLKC ENSTTRP00000013341/1-527 EMETPDWTPD IKHSKIWFGS NMGNGTIFLG IPGDNKQVVS EAFYFYTLKC BACU008912/1-523 EMETPDWTPD IKHSKIWFGS DMGNGTIFLG IPGDNKQVVS EAFYFYMLKC bmy_12111T0/1-523 EMETPDWTPD IKHSKIWFGS NMGNGTIFLG IPGDNKQVVS EAFYFYMLKC 351 400 ENSP00000308620/1-527 AEDDTNEEQT TFTNSQTSTE DPGDSTPFED SEEFCFSAEA NSFDGDDEFD ENSBTAP00000039446/1-527 AEDDVNEDQI TLTSSQTSTE DPGDSTPFED SEEFCFSAEA NSFDGDDEFD ENSTTRP00000013341/1-527 AEDDVNEDQK TFTNSQTSTE DPGDSTPFED SEEFCFSAEA NSFDGDDEFD BACU008912/1-523 AEDDVNEDQK TVTNSQTSTE DPGDSTPFED SEEFCFSAEA NSFDGDDEFD bmy_12111T0/1-523 AEDAVNEDQK TFTNSQTSTE DPGDSTPFED SEEFCFSAEA NSFDGDDEFD 401 450 ENSP00000308620/1-527 TYNEDDEEDE SETGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD ENSBTAP00000039446/1-527 TYNEDDEEDE SETGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD ENSTTRP00000013341/1-527 TYNEDDEEDE SETGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD BACU008912/1-523 TYNEDDEEDE SETGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD bmy_12111T0/1-523 TYNEDDEENE SETGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD 451 500 ENSP00000308620/1-527 GHWVHAQCMD LAERTLIHLS AGSNKYYCNE HVEIARALHT PQRVLPLKKP ENSBTAP00000039446/1-527 GHWVHAQCMD LAERTLIHLS EGSNKYYCNE HVEIARALQT PKRVQSLKKP ENSTTRP00000013341/1-527 GHWVHAQCMD LAESTLIHLS EGSNKYYCNE HVEIARALQT PKRVLPLKKP BACU008912/1-523 GHWVHAQCMD LAESTLIHLS EGSNKYYCNE HVEIARALQT PKRVLPLKKP bmy_12111T0/1-523 GHWVHAQCMD LAESTLIHLS EGSNKYYCNE HVEIARALQT PKRVLPLKKP 501 550 ENSP00000308620/1-527 PMKSLRKKGS GKILTPAKKS FLRRLFD ENSBTAP00000039446/1-527 PLRSLHKKGS GKIITPAKKS FLRRLFD ENSTTRP00000013341/1-527 PLKSLHKKGS GKIITPAKKS FLRRLFD BACU008912/1-523 PLKSLHKKGS GKIITPAKKS FLRRLFD bmy_12111T0/1-523 PLKSLHKKGS GKIITPAKKS FLRRLFD