KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:49:37 2014 Check: 00 .. Name: ENSP00000438526/1-583 Len: 585 Check: 5645 Weight: 1.00 Name: ENSBTAP00000039525/1-580 Len: 585 Check: 4117 Weight: 1.00 Name: bmy_01314T0/1-582 Len: 585 Check: 7106 Weight: 1.00 Name: ENSTTRP00000005541/1-437 Len: 585 Check: 2731 Weight: 1.00 // 1 50 ENSP00000438526/1-583 MRQGHAPEES E--PGCEAPC AGPCHAQRVL QALNAYRRSG TLTDVVLRAG ENSBTAP00000039525/1-580 MLKGPVLEES E--WGSEAPC AGSCHAQRVL QTLNAYRRSG ILTDVVLRAG bmy_01314T0/1-582 MLEGPVPEEP ERDWGSEAPC AGSCHAQRIL QTLNAYRRSS TLTDVVLRAG ENSTTRP00000005541/1-437 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000438526/1-583 GRDFPCHRAA LSAGSAYFRS LFAAGRPERG PAVVPVVPVA PEAPGTSPAG ENSBTAP00000039525/1-580 GHDFPCHRAA LSAGSAYFRS LFAAGRPERG LAVVPVV--- PEAPGPAGTA bmy_01314T0/1-582 GRDFPCHRAA LSAGSTYFRS LFAAGQPERG LAMVPVV--- PEAPGPAGTA ENSTTRP00000005541/1-437 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000438526/1-583 AAAALAVVLD YVYGAGVRLR AEDEAAAVLA LAERLGVAGL REACVRFLEG ENSBTAP00000039525/1-580 VATALAVVLD YVYCAGVRLR AEDEAAAVLA LAERLGVAGL REACARFLEG bmy_01314T0/1-582 VATALAVVLD YLYGAGVRLR AEDEAAAVLA LAERLGVAGL REACARFLEG ENSTTRP00000005541/1-437 ---------- ---------- ---------- ---------- --------EG 151 200 ENSP00000438526/1-583 RLRAANSLAL RRVAAAFSLA PLAERCGRVL RQAFAEVARH ADFLELAPDE ENSBTAP00000039525/1-580 RLRAANSLAL RRVAAAFSLA PLAERCSRVL RQAFAEVARH ADFLELTPDE bmy_01314T0/1-582 RLRAANSLAL RRVAAAFSLA SLAERCGRVL RQAFAEVARH ADFLELTPDE ENSTTRP00000005541/1-437 RLRAANSLAL RRVAAAFSLA SLAERCGRVL RQAFAEVAHH ADFLELTPDE 201 250 ENSP00000438526/1-583 VVALLADPAL GVAREEAVFE AAMRWVRHDA PARRGQLRRL LEHVRLPLLA ENSBTAP00000039525/1-580 VAALLADPAL GVAHEEAVFE AAMRWVRHDA PARRGQLRRL LEHVRLPLLA bmy_01314T0/1-582 VAALLADPAL GVAHEEAVFE AAMRWVRHDP PARRGQLRRL LEHVRLPLLA ENSTTRP00000005541/1-437 VAALLADPAL GVAHEEAVFE AAMRWVRHDP PARRGQLRRL LEHVRLPLLA 251 300 ENSP00000438526/1-583 PAYFLEKVEA DELLQACGEC RPLLLEARAC FILGREAGAL RTRPRRFMDL ENSBTAP00000039525/1-580 PAYFLEKVEA DELLQACSEC RPLLLEARAC FILGRESGAL RARPRRFMDL bmy_01314T0/1-582 PAYFLEKVEA DELLQACGEC RPLLLEARAC FILGRETGTL RARPRRFMDL ENSTTRP00000005541/1-437 PAYFLEKVEA DELLQACDEC RPLLLEARAC FILGRETGTL RARPRRFMDL 301 350 ENSP00000438526/1-583 AEVIVVIGGC DRKGLLKLPF ADAYHPESQR WTPLPSLPGY TRSEFAACAL ENSBTAP00000039525/1-580 AEMIVVIGGC DRKGLLKLPF TDAYHPDSQR WTPLPSLPGY ARSEFATCTL bmy_01314T0/1-582 AEVIVVIGGC DRKGLLKLPF ANAYHPDSRR WTPLPSVPGF ARSEFATCTL ENSTTRP00000005541/1-437 AEVIVVIGGC DRKGLLKLPF ADAYHPDSRR WTPLPSVPGF ARSEFATCTL 351 400 ENSP00000438526/1-583 RNDVYVSGGH INSHDVWMFS SHLHTWIKVA SLHKGRWRHK MAVVQGQLFA ENSBTAP00000039525/1-580 RNDIYVSGGH INSRDVWMFS SHLHTWIKVA SLHRGRWRHK MAVVQGQLFV bmy_01314T0/1-582 RNDIYVSGGH INSRDVWMFS SHLHTWIKVA SLHKGRWRHK MAVVQGQLFV ENSTTRP00000005541/1-437 RNDIYVSGGH INSRDVWMFS SHLHTWIKVA SLHKGRWRHK MAVVQGQLFV 401 450 ENSP00000438526/1-583 VGGFDGLRRL HSVERYDPFS NTWAAAAPLP EAVSSAAVAS CAGKLFVIGG ENSBTAP00000039525/1-580 VGGFDGLRRL RSVERYDPFS NTWASAAPLL EAVSSAAVAP CAGRLYVIGG bmy_01314T0/1-582 VGGFDGLRRL CSVERYDPFS NTWAAAAPLP EAVSSAAVAP CAGRLYVMGG ENSTTRP00000005541/1-437 VGGFDGLRRL CSVERYDPFS NTWAAAAPLL EAVSSAAVAP CAGRLYVMGG 451 500 ENSP00000438526/1-583 ARQGGVNTDK VQCFDPKEDR WSLRSPAPFS QRCLEAVSLE DTIYVMGGLM ENSBTAP00000039525/1-580 AGQDGVSTNK VQCFDSKEDR WSLRSPAPFS QRCLDAVSLD NTIYVVGGLM bmy_01314T0/1-582 AGWDGVSTNK VQCFDPKEDR WSLRSPAPFS QRCLEAVSLE DTIYVVGGLM ENSTTRP00000005541/1-437 AGRDGVNTNK VQCFDPKEDQ WSLRSPAPFS QRCLEAVALE DTIYVVGGLM 501 550 ENSP00000438526/1-583 SKIFTYDPGT DVWGEAAVLP SPVESCGVTV CDGKVHILGG RDDRGESTDK ENSBTAP00000039525/1-580 SKIFTYDPGT DVWGEAAVLP SPVESCGVTV CDGKVHILGG RDDHGESTDR bmy_01314T0/1-582 SKIFTYNPGM DVWGEAAVLP SPVESCGVTV CDGKVHILGG RDDHGESTDR ENSTTRP00000005541/1-437 SKIFTYNPGM DVWGEAAVLP SPVESCGVTV CDGKVHILGG RDDHGESTDR 551 600 ENSP00000438526/1-583 VFTFDPSSGQ VEVQPSLQRC TSSHGCVTII QSLGR ENSBTAP00000039525/1-580 VFTFDPSSGQ VEAQPSLQRC TSSHGCVTIV QSRGR bmy_01314T0/1-582 IFTFDPSSGQ VEAQPSLQRC TSSHGCVTIV QSLGR ENSTTRP00000005541/1-437 IFTFDPSSGQ VEAQPSLQRC TSSHGCVTIV QSLGR