KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:37 2014 Check: 00 .. Name: ENSBTAP00000039530/1-592 Len: 635 Check: 5000 Weight: 1.00 Name: ENSP00000368965/1-635 Len: 635 Check: 3130 Weight: 1.00 Name: ENSTTRP00000008421/1-580 Len: 635 Check: 4399 Weight: 1.00 Name: BACU007769/1-581 Len: 635 Check: 2560 Weight: 1.00 Name: bmy_22434T0/1-356 Len: 635 Check: 5251 Weight: 1.00 // 1 50 ENSBTAP00000039530/1-592 ---------- ---------- ---------- ---------D LDKKKPVELK ENSP00000368965/1-635 MSGAGRALAA LLLAASVLSA ALLAPGGSSG RDAQAAPPRD LDKKRHAELK ENSTTRP00000008421/1-580 ---------- ---------- ---------- ---------- ---------- BACU007769/1-581 ---------- ---------- ---------- ---------- ---------- bmy_22434T0/1-356 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000039530/1-592 MDQALLVIHN ELPGTNLTVY WNFDRCYHCL LQVLATVSQS RKAGRPGIAA ENSP00000368965/1-635 MDQALLLIHN ELLWTNLTVY WKSECCYHCL FQVLVNVPQS PKAGKPSAAA ENSTTRP00000008421/1-580 MDQALLLIHN ELPGTNLTIY WNFDRCYHCL LQVLVDVSQS KKPGEPSIEA BACU007769/1-581 MDQALLLIHN ELPGTNLTVY WNFDRCYHCL LQVLVDVSQS RKPGEPSIEA bmy_22434T0/1-356 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000039530/1-592 VAVSTQHGSI LQLNNTSEDK EVCRLEYKFG EFGNYSLLVK HIRDGVSEIV ENSP00000368965/1-635 ASVSTQHGSI LQLNDTLEEK EVCRLEYRFG EFGNYSLLVK NIHNGVSEIA ENSTTRP00000008421/1-580 VAVSTQHGSI LQLNDTAEEK QVCRLEYKFG EFGNYSLLVK HTHDGVNEIA BACU007769/1-581 VAVSTQHGSI LQLNDTAEEK QVCRLEYKFG EFGNYSLLVK HTHDGVNEIA bmy_22434T0/1-356 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000039530/1-592 CDLVVNKEPV DSNLPVGIAF LVGMALAIVV SFLRFLLSLE DFQNWISKAI ENSP00000368965/1-635 CDLAVNEDPV DSNLPVSIAF LIGLAVIIVI SFLRLLLSLD DFNNWISKAI ENSTTRP00000008421/1-580 CDLVVNEKPV DSNLPVSIAF LVGLVLIIVV SFLR-ALSLE DFRDWISKAI BACU007769/1-581 CDLVVNEKPV DSNLPVSIAF LVGLVLIIVV SLLRFSLSLE DFHDWISKAI bmy_22434T0/1-356 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000039530/1-592 NSRETDRLIN SELGSPSRA- ---SDPQPEA WRRSAAPLRL RCVDTFRGMA ENSP00000368965/1-635 SSRETDRLIN SELGSPSRTD PLDGDVQPAT WRLSALPPRL RSVDTFRGIA ENSTTRP00000008421/1-580 NSQETDGLIN SELGSPSRA- ---GDPPPEA WRQSATPLRL RCVDTFRGIA BACU007769/1-581 NSQETDGLIN SELGSPSRA- ---GDPPPEA WRQSATPLRL RCVDTFRGIA bmy_22434T0/1-356 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000039530/1-592 LILMVFVNYG GGKYWYFKHS SWNGLTVADL VFPWFVFIMG TSIFLSMTSI ENSP00000368965/1-635 LILMVFVNYG GGKYWYFKHA SWNGLTVADL VFPWFVFIMG SSIFLSMTSI ENSTTRP00000008421/1-580 LTLMVFVNYG GGRYWYFKHA SWNGLTVADL VFPWFVFIMG SSIFLSMTSV BACU007769/1-581 LILMVFVNYG GGRYWYFRHA SWNGLTVADL VFPWFVFIMG SSIFLSMTSV bmy_22434T0/1-356 ---MVFVNYG GGRYWYFKHA SWNGLTVADL VFPWFVFIMG SSIFLSMTSV 301 350 ENSBTAP00000039530/1-592 LQRGCSKFRL LGKIAWRSFL LICIGIFVVN PKYCLGPLSW EKARIPGVLQ ENSP00000368965/1-635 LQRGCSKFRL LGKIAWRSFL LICIGIIIVN PNYCLGPLSW DKVRIPGVLQ ENSTTRP00000008421/1-580 LQRGCSKFRL LGKIAWRSFL LICIGIVIVN PNYCLGPLSW EKVRIPGVLQ BACU007769/1-581 LQRGCPKFRL LGKIAWRSFL LICIGIVIVN PNYCLGPLSW EKVRIPGVLQ bmy_22434T0/1-356 LQRGCSKFRL LGKIAWRSFL LICIGIVIVN PNYCLGPLSW EKLRIPGVLQ 351 400 ENSBTAP00000039530/1-592 RLGATYFVVA VLELLFAKPV PETCASERSC FSLLDITASW PQWLFVLILE ENSP00000368965/1-635 RLGVTYFVVA VLELLFAKPV PEHCASERSC LSLRDITSSW PQWLLILVLE ENSTTRP00000008421/1-580 RLGGTYFVVA VLELLFAKPV PEICTSETSC FSLLDITSSW PQWLFILMLE BACU007769/1-581 RLGGTYFVVA VLELLFAKPV PEICTSERSC FSLLDITSSW PQWLFVLMLE bmy_22434T0/1-356 RLGGTYFVVA VLELLFAKPV PEICTSERSC FSLLDVTSSW PQWLFVLMLE 401 450 ENSBTAP00000039530/1-592 GVWLALTFFL PVPGCPTGYL GPGGIGDGGR YRNCTGGAAG YVDRLLLGDQ ENSP00000368965/1-635 GLWLGLTFLL PVPGCPTGYL GPGGIGDFGK YPNCTGGAAG YIDRLLLGDD ENSTTRP00000008421/1-580 GVWLALTFFL PVPGCPTGYL GPGGLGDWGK YPNCTGGAAG YIDRLLLGDH BACU007769/1-581 GVWLALTFFL PVPGCPTGYL GPGGLGDWGK YPNCTGGAAG YIDRLLLGGH bmy_22434T0/1-356 GVWLALTFFL PVPGCPTGYL GPGGLGDWGK YPNCTGGAAG YIDRLLLGDH 451 500 ENSBTAP00000039530/1-592 HLYQHPSSAV LYHTEVAYDP EGILGTINSI VMAFLGVQAG KILLYYKDQT ENSP00000368965/1-635 HLYQHPSSAV LYHTEVAYDP EGILGTINSI VMAFLGVQAG KILLYYKART ENSTTRP00000008421/1-580 HLYQHPSSAV LYHTEVAYDP EGILGTINSI VMAFLGVQAG KILLYYKDQT BACU007769/1-581 HLYQHPSSAV LYHTEVAYDP EGILGTINSI VMAFLGVQAG KILLYYKDQT bmy_22434T0/1-356 HLYQHPSSAV LYHTEVAYDP EGILGTINSI VMAFLGVQ-- ---------- 501 550 ENSBTAP00000039530/1-592 RGILIRFAAW GCLLGLVSVA LTKASENEGF IPVNKNLWSI SYVTTLSSLA ENSP00000368965/1-635 KDILIRFTAW CCILGLISVA LTKVSENEGF IPVNKNLWSL SYVTTLSSFA ENSTTRP00000008421/1-580 KGILIRFATW GCFLGFISVA LTKASENEGF IPVNKNLWSI SYVTTLSSFA BACU007769/1-581 KGILIRFAAW GCFLGFISVA LTKASENEGF IPVNKNLWSI SYVTTLSSFA bmy_22434T0/1-356 ---------- ----GSISVA LTKASENEGF IPVNKNLWSI SYVTTLSSFA 551 600 ENSBTAP00000039530/1-592 FLILLALYPV VDVKGLWTGA PFFYPGMNSI LVYVGHEVFA NYFPFQWKLG ENSP00000368965/1-635 FFILLVLYPV VDVKGLWTGT PFFYPGMNSI LVYVGHEVFE NYFPFQWKLK ENSTTRP00000008421/1-580 FFILLVLYPV VDVKGLWTGT PFFYPGMNSI LVYVGHEVFA NYFPFQWRLG BACU007769/1-581 FFILLVLYPV VDVKGLWTGT PFFYPGMNSI LVYVGHKVFA NYFPFRWRLG bmy_22434T0/1-356 FFILLVLYPV VDVKGLWTGT PFFYPGMNSI LVYVGHEVFA NYFPFQWRLG 601 650 ENSBTAP00000039530/1-592 DQQSHKEHLV QNMVATALWV LIAFALYKKK VFWKI ENSP00000368965/1-635 DNQSHKEHLT QNIVATALWV LIAYILYRKK IFWKI ENSTTRP00000008421/1-580 DNQSHREHLV QNIVATALWV LIAYVLYKKK VFWKI BACU007769/1-581 DSEAHKEHLV QNTVATALWV LIAYVLYKKK VFWKI bmy_22434T0/1-356 DSEAHKEHLI QNTVATALWV LIAYVLYKKK VFWKI