KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:38 2014 Check: 00 .. Name: ENSTTRP00000001017/1-307 Len: 319 Check: 4229 Weight: 1.00 Name: BACU009412/1-245 Len: 319 Check: 6402 Weight: 1.00 Name: bmy_09729T0/1-211 Len: 319 Check: 9670 Weight: 1.00 Name: ENSP00000220772/1-314 Len: 319 Check: 9694 Weight: 1.00 Name: ENSBTAP00000039575/1-308 Len: 319 Check: 7617 Weight: 1.00 // 1 50 ENSTTRP00000001017/1-307 ------MGGG RGRG-GALLA LAAGLLAAGS A-----SEYD YVSFQSDVGA BACU009412/1-245 -----MMERT LSVPLESVIK ITDDMIMKQN GRNRPESEYD YVSFQSDVGA bmy_09729T0/1-211 ------MGGG RWAAAGALLA LAAGLLAAGS A-----SEYD YVSFQSDVGA ENSP00000220772/1-314 MGIGRSEGGR RGAALGVLLA LGAALLAVGS A-----SEYD YVSFQSDIGP ENSBTAP00000039575/1-308 ------MGGG RWAAAGALLA LAAGLLAAGS A-----SECD YVSFQSDIGA 51 100 ENSTTRP00000001017/1-307 YQSGRFYTKP PQCVDIPVDL RLCHTVGYKR MVLPNLLEHE TRGEVKQQAS BACU009412/1-245 YQSGRFYTKP PQCVDIPVDL RLCHTVGYKR MVLPNLLEHE TMAEVKQQAS bmy_09729T0/1-211 YQSGRFYTKP PQCVDIPVDL RLCHTVGYKR MVLPNLLEHE TMAEVKQQAS ENSP00000220772/1-314 YQSGRFYTKP PQCVDIPADL RLCHNVGYKK MVLPNLLEHE TMAEVKQQAS ENSBTAP00000039575/1-308 YQSGRFYTKP PQCVDIPADL RLCHNVGYKR MVLPNLLEHE TMAEVKQQAS 101 150 ENSTTRP00000001017/1-307 SWVPLLNKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009412/1-245 SWVPLLNKNC HIGTQVFLCS LFAPVCLDRP IYPCRWLCEA VRDSCEPVMQ bmy_09729T0/1-211 SWVPLLNKNC HIGTQVFLCS LFAPVCLDRP IYPCRWLCEA VRDSCEPVMQ ENSP00000220772/1-314 SWVPLLNKNC HAGTQVFLCS LFAPVCLDRP IYPCRWLCEA VRDSCEPVMQ ENSBTAP00000039575/1-308 SWVPLLNKNC HIGTQVFLCS LFAPVCLDRP IYPCRWLCEA VRDSCEPVMQ 151 200 ENSTTRP00000001017/1-307 XXXXXXXEML KCDKFPEGDV CIAMTPPNAT EASKPQGTTV CPPCDNELKS BACU009412/1-245 FFGFYWPEML KCDKFPEGDV CIAMTPPNAT EASKPQGTTV CPPCDNELKS bmy_09729T0/1-211 FFGFYWPEML KCDKFPEGDV CIAMTPPNAT EASKPQGTTV CPPCDNELKS ENSP00000220772/1-314 FFGFYWPEML KCDKFPEGDV CIAMTPPNAT EASKPQGTTV CPPCDNELKS ENSBTAP00000039575/1-308 FFGFYWPEML KCDKFPEGDV CIAMTPPNAT EASKPQGTTV CPPCDNELKS 201 250 ENSTTRP00000001017/1-307 EAIIEHLCAS EFALRMKIKE VKKENGDKKI VPKKKKPLKL GPIKKKELKK BACU009412/1-245 EAIIEHLCAS EFAPHQVLNS SEDLEDEA-- ---------- ---------- bmy_09729T0/1-211 EAIIEHLCAS EFGKKASLAA SG-------- ---------- ---------- ENSP00000220772/1-314 EAIIEHLCAS EFALRMKIKE VKKENGDKKI VPKKKKPLKL GPIKKKDLKK ENSBTAP00000039575/1-308 EAIIEHLCAS EFALRMKIKE VKKENGDKKI VPKKKKPLKL GPIKKKELKK 251 300 ENSTTRP00000001017/1-307 LVLYLKNGAD CPCHQLDNLS HHFLIMGRKV KSQYLLTAIH KWDKKNKEFK BACU009412/1-245 ---------- ---------- ------GRSQ ACQSLFSCF- ---------- bmy_09729T0/1-211 ---------- ---------- ---------- ---------- ---------- ENSP00000220772/1-314 LVLYLKNGAD CPCHQLDNLS HHFLIMGRKV KSQYLLTAIH KWDKKNKEFK ENSBTAP00000039575/1-308 LVLYLKNGAD CPCHQLDNLS HHFLIMGRKV KSQYLLTAIH KWDKKNKEFK 301 350 ENSTTRP00000001017/1-307 NFMKKMKNHE CPTFQSVFK BACU009412/1-245 ---------- SAGFQLSGL bmy_09729T0/1-211 ---------- --------- ENSP00000220772/1-314 NFMKKMKNHE CPTFQSVFK ENSBTAP00000039575/1-308 TFMKKMKNHE CPTFQSVFK