KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:39 2014 Check: 00 .. Name: bmy_14645T0/1-246 Len: 341 Check: 2798 Weight: 1.00 Name: BACU003046/1-341 Len: 341 Check: 1601 Weight: 1.00 Name: ENSTTRP00000016060/1-339 Len: 341 Check: 6151 Weight: 1.00 Name: ENSP00000276461/1-339 Len: 341 Check: 9442 Weight: 1.00 Name: ENSBTAP00000039591/1-338 Len: 341 Check: 4051 Weight: 1.00 // 1 50 bmy_14645T0/1-246 --MAQLGAVL AVAASFLCAS LFSAVHKIEE GHIGVYYRGG ALLTSTSGPG BACU003046/1-341 SPMAQLGAVL AVAASFLCAS LFSAVHKIEE GHIGVYYRGG ALLTSTSGPG ENSTTRP00000016060/1-339 --MAQLGAVL AVAASFLCAS LFSAVHKIEE GHIGVYYRGG ALLTSTSGPG ENSP00000276461/1-339 --MAQLGAVV AVASSFFCAS LFSAVHKIEE GHIGVYYRGG ALLTSTSGPG ENSBTAP00000039591/1-338 --MAQLGAVV AVAASFFCAS LFSAVHKIEE GHIGVYYRGG ALLTSTSGPG 51 100 bmy_14645T0/1-246 FHLMLPFITS YKSVQA---- ---------- ---------- ---LDSLV-- BACU003046/1-341 FHLMLPFITS YKSVQTTLQT DEVKNVPCGT SGGVMIYFDR IEVVNFLVPH ENSTTRP00000016060/1-339 FHLMLPFITS YKSVQTTLQT DEVKNVPCGT SGGVMIYFDR IEVVNFLVPH ENSP00000276461/1-339 FHLMLPFITS YKSVQTTLQT DEVKNVPCGT SGGVMIYFDR IEVVNFLVPN ENSBTAP00000039591/1-338 FHLMLPFITS YKSVQTTLQT DEVKNVPCGT SGGVMIYFDR IEVVNFLVPH 101 150 bmy_14645T0/1-246 ---------- -GFGFSVLLR TIHRQIVR-- ---------- PMSDQIDENL BACU003046/1-341 AVYDIVKNYT ADYDKALIFN KIHHELNQFC SVHTLQEVYI ELFDQIDENL ENSTTRP00000016060/1-339 AVYDIVKNYT ADYDKALIFN KIHHELNQFC SVHTLQEVYI ELFDQIDENL ENSP00000276461/1-339 AVYDIVKNYT ADYDKALIFN KIHHELNQFC SVHTLQEVYI ELFDQIDENL ENSBTAP00000039591/1-338 AVYDIVKNYT ADYDKALIFN KIHHELNQFC SVHTLQEVYI ELFDQIDENL 151 200 bmy_14645T0/1-246 KLALQQDLTS MAPGLVIQAV RVTKPNIPEA IRRNYELMES EKTKLLIAAQ BACU003046/1-341 KLALQQDLTS MAPGLVIQAV RVTKPNIPEA IRRNYELMES EKTKLLIAAQ ENSTTRP00000016060/1-339 KLALQQDLTS MAPGLVIQAV RVTKPNIPEA IRRNYELMES EKTKLLIAAQ ENSP00000276461/1-339 KLALQQDLTS MAPGLVIQAV RVTKPNIPEA IRRNYELMES EKTKLLIAAQ ENSBTAP00000039591/1-338 KLALQQDLTS MAPGLVIQAV RVTKPNIPEA IRRNYELMES EKTKLLIAAQ 201 250 bmy_14645T0/1-246 KQKVVEKEAE TERKKALIEA EKVAQVAEIT YGQ------- ---------- BACU003046/1-341 KQKVVEKEAE TERKKALIEA EKVAQVAEIT YGQKVMEKET EKRISEIEDA ENSTTRP00000016060/1-339 KQKVVEKEAE TERKKALIEA EKVAQVAEIT YGQKVMEKET EKRISEIEDA ENSP00000276461/1-339 KQKVVEKEAE TERKKALIEA EKVAQVAEIT YGQKVMEKET EKKISEIEDA ENSBTAP00000039591/1-338 KQKVVEKEAE TERKKALIEA EKVAQVAEIT FGQKVMEKET EKRISEIEDA 251 300 bmy_14645T0/1-246 ---------- ---------- ----KLKLTP EYLQLMKYKA IASNSKIYFG BACU003046/1-341 AFLAREKAKA DAECYTALKI AEANKLKLTP EYLQLMKYKA IASNSKIYFG ENSTTRP00000016060/1-339 AFLAREKAKA DAECYTAMKI AEANKLKLTP EYLQLMKYKA IASNSKIYFG ENSP00000276461/1-339 AFLAREKAKA DAECYTAMKI AEANKLKLTP EYLQLMKYKA IASNSKIYFG ENSBTAP00000039591/1-338 AFLAREKAKA DAECYTAMKI AEANKLKLTP EYLQLMKYKA IASNSKIYFG 301 350 bmy_14645T0/1-246 KDIPDMFVDS PGSLGKHLEA LVDKPSFGLE EEPSEADAEE N BACU003046/1-341 KDIPDMFVDS PGSLGKHLEA LVDKPSFGLE EEPSEADAEE N ENSTTRP00000016060/1-339 KDIPDMFVDA AGSLGKHLEA LADKPSFGLE EEPSEADAEE N ENSP00000276461/1-339 KDIPNMFMDS AGSVSKQFEG LADKLSFGLE DEPLETATKE N ENSBTAP00000039591/1-338 KDIPNMFMDS AGGVGKQFEG LADKLSFVLE DEPMEADSEN -