KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:45 2014 Check: 00 .. Name: ENSTTRP00000011130/1-455 Len: 521 Check: 1124 Weight: 1.00 Name: bmy_04288T0/1-520 Len: 521 Check: 8951 Weight: 1.00 Name: BACU006354/1-479 Len: 521 Check: 7421 Weight: 1.00 Name: ENSP00000379118/1-291 Len: 521 Check: 4698 Weight: 1.00 Name: ENSBTAP00000039686/1-289 Len: 521 Check: 6539 Weight: 1.00 // 1 50 ENSTTRP00000011130/1-455 ---------- ---------- ---------- ---------- ---------- bmy_04288T0/1-520 AGGSSVASAP VSAFSRTSVT PSNQDICSSS AVFSECCHHS PVQSAVVLKA BACU006354/1-479 ---------- ---------- ---------- ---------- -MQSAVVLKA ENSP00000379118/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000039686/1-289 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011130/1-455 ---------- -----VCQDT VQASKRNSHG SEWVQALKPA KNTKARRTLK bmy_04288T0/1-520 PPCQSSLTQG LTVTVVCQGT VQASKRNSHG SEWVQALKPA KNTKARRTLK BACU006354/1-479 PPCQSSLTQG LTVTVVCQDT VQASKRNSHG SEWVQALKPA KNTKARRTLK ENSP00000379118/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000039686/1-289 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000011130/1-455 FSKSLNDVGE -KAPDALESF DYAERTCSEG KLILPQDPCL SINRLHQKEK bmy_04288T0/1-520 FSKSLNDVGE -KAQDALESF DSAERTCSEG KLILPQDPCL SINRFHQKEK BACU006354/1-479 FSKSLNDVGE -KAQDALESF DYAERTCSEG KLILPQDPCL SINRFHQKEK ENSP00000379118/1-291 MSMPLHQISA IPSQDAISAR VYRSKT---- ---------- -----KEKER ENSBTAP00000039686/1-289 MNMPLHQISA IPSQDATSAR VYRSKT---- ---------- -----KEKER 151 200 ENSTTRP00000011130/1-455 RTLNRKPLGS SKHSCVSSLS ANRSAASEVG AGKGGTHVLL LDEKADGEAV bmy_04288T0/1-520 RTLNRKPLGS CKHSCVSSLS ANRSAASEAG AGKGGMHILL LDEKADGEAV BACU006354/1-479 RTLNRKPLGS SKHSCVSSLS ANRSAASEAG AGKGGMHVLL LDEKADGEAV ENSP00000379118/1-291 EEQNEKTLG- ---------- ---------- ---------- ---------- ENSBTAP00000039686/1-289 EEQNEKTLG- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000011130/1-455 SRSRRLLRYL FSLSHGLSTS SLHWFHELES CTAGPHPAKS SSGLAGSAGF bmy_04288T0/1-520 SRSRRLLRYL FSLSHGLSTS SLHWLHELES CAAGPHPAKS SSGPAGSAGF BACU006354/1-479 SRSRRLLRYL FSLSHGLSTS SLHWFHELES CAAGPHPAKS SSGPAGSAGF ENSP00000379118/1-291 ---------- HFMSHSSNIS K--------- --AGSPPSAS APA------- ENSBTAP00000039686/1-289 ---------- HSMSHSSNIS K--------- --AGGSSVAS A--------- 251 300 ENSTTRP00000011130/1-455 FSDETGDDDV FEDSTSTKPK SRVLRAPLCS VEKDSDLDGP SPLSEKGPPI bmy_04288T0/1-520 CSDGTGDDDV FEDSTSTKPK SRVLRAPICS VEKDSDLDDP SPLSEKGPPI BACU006354/1-479 CSDETGDDDV FEDSTSAKPK SRVLRAPICS AEKDSDLDGP SPLSEKGPPI ENSP00000379118/1-291 ---------- ---------- ------PVSS FSRTS----- ---------I ENSBTAP00000039686/1-289 ---------- ---------- ------PVSS FPRTS----- ---------V 301 350 ENSTTRP00000011130/1-455 SPVSTSGDVC RICHCEGDDE SPLITPCHCT GSLHFVHQTC LQQWIKSSDT bmy_04288T0/1-520 CPVSTSGDAC RICHCEGDDE SPLITPCHCT GSLHFVHQTC LQQWIKSSDT BACU006354/1-479 SPVSTSGDAC RICHCEGDDE SPLITPCHCT GSLHFVHQTC LQQWIKSSDT ENSP00000379118/1-291 TP--SSQDIC RICHCEGDDE SPLITPCHCT GSLHFVHQAC LQQWIKSSDT ENSBTAP00000039686/1-289 TP--SNQDIC RICHCEGDDE SPLITPCRCT GSLHFVHQTC LQQWIKSSDT 351 400 ENSTTRP00000011130/1-455 RCCELCKYEF IMETKLKPLR KWEKLQMTAS ERRKIMCSVT FHIIAITCVV bmy_04288T0/1-520 RCCELCKYEF IMETKLKPLR KWEKLQMTAS ERRKIMCSVT FHIIAITCVV BACU006354/1-479 RCCELCKYEF IMETKLKPLR KWEKLQMTAS ERRKIMCSVT FHIIAITCVV ENSP00000379118/1-291 RCCELCKYEF IMETKLKPLR KWEKLQMTSS ERRKIMCSVT FHVIAITCVV ENSBTAP00000039686/1-289 RCCELCKYEF IMETKLKPLR KWEKLQMTSS ERRKIMCSVT FHVIAITCVV 401 450 ENSTTRP00000011130/1-455 WSLYVLIDRT AEEIKQGQAT GILEWPFWTK LVVVAIGFTG GLLFMYVQCK bmy_04288T0/1-520 WSLYVLIDRT AEEIKQGQAT GILEWPFWTK LVVVAIGFTG GLLFMYVQCK BACU006354/1-479 WSLYVLIDRT AEEIKQGQAT GILEWPFWTK LVVVAIGFTG GLLFMYVQCK ENSP00000379118/1-291 WSLYVLIDRT AEEIKQGQAT GILEWPFWTK LVVVAIGFTG GLLFMYVQCK ENSBTAP00000039686/1-289 WSLYVLIDRT AEEIRQGQAT GILEWPFWTK LVVVAIGFTG GLLFMYVQCK 451 500 ENSTTRP00000011130/1-455 VYVQLWKRLK AYNRVIYVQN CPDTSKKNIF EKSALTEPNF ENKDGRGICH bmy_04288T0/1-520 VYVQLWKRLK AYNRVIYVQN CPETSKKNIF EKSTLTEPNF ENKDGRGICH BACU006354/1-479 VYVQLWKRLK AYNRVIYVQN CPETSKKNIF EKSALTEPNF ENKDGRGICH ENSP00000379118/1-291 VYVQLWKRLK AYNRVIYVQN CPETSKKNIF EKSPLTEPNF ENKHGYGICH ENSBTAP00000039686/1-289 VYVQLWRRLK AYNRVIYVQN CPETSKRNIF EKPALPEPNF ESKDGRGVCH 501 550 ENSTTRP00000011130/1-455 SDTNSSCCTE PEDTGAEIVH I bmy_04288T0/1-520 SDTNSSCCTE PEDTGAEIVH I BACU006354/1-479 SDTNSSCCTE PEDTGAEIVH I ENSP00000379118/1-291 SDTNSSCCTE PEDTGAEIIH V ENSBTAP00000039686/1-289 SDTNSSCCTE PEDTGAEIIH V