KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:45 2014 Check: 00 .. Name: ENSP00000348959/1-641 Len: 729 Check: 4036 Weight: 1.00 Name: bmy_16450T0/1-425 Len: 729 Check: 3154 Weight: 1.00 Name: BACU002670/1-605 Len: 729 Check: 6926 Weight: 1.00 Name: ENSTTRP00000009995/1-641 Len: 729 Check: 4424 Weight: 1.00 Name: ENSBTAP00000039687/1-643 Len: 729 Check: 7891 Weight: 1.00 // 1 50 ENSP00000348959/1-641 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC bmy_16450T0/1-425 ---------- ---------- ---------- ---------- ---------- BACU002670/1-605 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC ENSTTRP00000009995/1-641 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC ENSBTAP00000039687/1-643 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC 51 100 ENSP00000348959/1-641 FGAFFFLPDS SKHKRFDLGL EDVLIPHVDA GKGAKNPGVF LIHGPDEHRH bmy_16450T0/1-425 ---------- ---------- ---------- ---------- ---------- BACU002670/1-605 FGAFFFLPDS SKHKRFDLGL EDVLIPHVDA GKGAKNPGVF LIHGPDEHRH ENSTTRP00000009995/1-641 FGAFFFLPDS SKHKRFDLGL EDVLIPHVDA GKGAKNPGVF LIHGPDEHRH ENSBTAP00000039687/1-643 FGAFFFLPDS SKHKRFDLGL EDVLIPHVDA GKGAKHSGIF LIHGPDEHRH 101 150 ENSP00000348959/1-641 REEEERLRNK IRADHEKALE EAKEKLRKSR EEIRAEIQTE KNKVVQEMKI bmy_16450T0/1-425 ---------- ---------- ---------- ---------- ---------- BACU002670/1-605 REEEERLRNK IRADHEKALE EAKEKLKKSR EEIQAEIQTE KNKVVQEMKT ENSTTRP00000009995/1-641 REEEERLRNK IRADHEKALE EAKEKLKKSR EEIRAEIQTE KNKVVQEMKT ENSBTAP00000039687/1-643 REEEERLRNK IRADHEKALE EAKEKLKKSR EEIRAEIQTE KNKVVQEMKI 151 200 ENSP00000348959/1-641 KENKPLPPVP IPNLVGIRGG DPEDNDIREK REKIKEMMKH AWDNYRTYGW bmy_16450T0/1-425 ---------- ---------- ---------- ------MVKH ---------- BACU002670/1-605 KEKKPVPAAP IPNLIGTHGG DPEDNDLREK REKIKEMMKH AWDNYRIYGW ENSTTRP00000009995/1-641 KEKKPLPAVP IPNLIGTHGG DPEDNDLREK REKIKEMMKH AWDNYRIYGW ENSBTAP00000039687/1-643 REKKPLPAVP IPNLIGTHGG DPEDNDLREK REKIKEMMKH AWDNYRIYGW 201 250 ENSP00000348959/1-641 GHNELRPIAR KGHSPNIF-- GSSQMGATIV DALDTLYIMG LHDEFLDGQR bmy_16450T0/1-425 ---------- ---------- ---------- ---------- ---------- BACU002670/1-605 GHNELRPIAR KGHSTNIF-- GSSQMGATIV DALDTLYIMG LHDEFRDGQK ENSTTRP00000009995/1-641 GHNELRPIAR KGHSTNIF-- GSSQMGATIV DALDTLYIMG LHDEFRDGQK ENSBTAP00000039687/1-643 GHNELRPIAR KGHSTNIFDI GTSQMGATIV DALDTLYIMG LHDEFRDGQK 251 300 ENSP00000348959/1-641 WIEDNLDFSV NSEVSVFEVN IRFIGGLLAA YYLSGEEIFK IKAVQLAEKL bmy_16450T0/1-425 ---------- ---------- ---------- ------EIFK LKAVQLAEKL BACU002670/1-605 WIENNLDFSV NSEVSVFEVN IRFIGGLLAA YYLSGEEIFK IKAVQLAEKL ENSTTRP00000009995/1-641 WIENNLDFSV NSEVSVFEVN IRFIGGLLAA YYLSGEEIFK IKAVQLAEKL ENSBTAP00000039687/1-643 WIENNLDFSV NSEVSVFEVN IRFIGGLLAA YYLSGEEIFK IKAVQLAEKL 301 350 ENSP00000348959/1-641 LPAFNTPTGI PWAMVNLKSG VGRNWGWASA GSSILAEFGT LHMEFIHLSY bmy_16450T0/1-425 LPAFNTPTGI PWAMVNLKSG VGRNWGWASA GSSILAEFGT LHMEFVHLSY BACU002670/1-605 LPAFNTPTGI PWAMVNLKSG VGRNWGWASA GSSILAEFGT LHMEFVHLSY ENSTTRP00000009995/1-641 LPAFNTPTGI PWAMVNLKSG VGRNWGWASA GSSILAEFGT LHMEFVHLSY ENSBTAP00000039687/1-643 LPAFNTPTGI PWAMVNLKSG VGRNWGWASA GSSILAEFGT LHMEFVHLSY 351 400 ENSP00000348959/1-641 LTGDLTYYKK VMHIRKLLQK MDRPNGLYPN YLNPRTGRWG QYHTSVGGLG bmy_16450T0/1-425 LTGNPIYYKK VMHIRKLLQK MDRPNGLYPN YLNPRTGRWD --HTSVGGLG BACU002670/1-605 LTGNPVYYKK VMHIRKLLQK MDRPNGLYPN YLNPRTGRWG QYHTSVGGLG ENSTTRP00000009995/1-641 LTGNPIYYKK VMHIRKLLQK MDRPNGLYPN YLNPRTGRWG QYHTSVGGLG ENSBTAP00000039687/1-643 LTGNPIYYKK VMHIRKLLQK MDRPNGLYPN YLNPRTGRWG QYHTSVGGLG 401 450 ENSP00000348959/1-641 DSFYEYLLKA WLMSDKTDHE ARKMYDDAIE AIEKHLIKKS RGGLTFIGEW bmy_16450T0/1-425 DSFYEYLLKA WLMSDKTDHE ARKMYDDAIE AIEKHLIRKS RGGLTFIGEW BACU002670/1-605 DSFYEYLLKA WLMSDKTDHE ARKMYDDAIE AIEKHLIRKS RGGLTFIGEW ENSTTRP00000009995/1-641 DSFYEYLLKA WLMSDKTDHE ARKMYDDAIE AIEKHLIRKS RGGLTFIGEW ENSBTAP00000039687/1-643 DSFYEYLLKA WLMSDKTDHE ARKMYDDAVE AIEKHLIRKS RGGLTFIGEW 451 500 ENSP00000348959/1-641 KNGHLEKKMG HLACFAGGMF ALGADGSRAD KAGHYLELGA EIARTCHESY bmy_16450T0/1-425 KNGHLEKKMG HLACFAGGMF VLGADGSRMD QAGHYLELGA EIARTCHESY BACU002670/1-605 KNGHLEKKMG HLACFAGGMF VLGADGSRMD QAGHYLELGA EIARTCHESY ENSTTRP00000009995/1-641 KNGHLEKKMG HLACFAGGMF VLGADGSRMD RAGHYLELGA EIARTCHESY ENSBTAP00000039687/1-643 KNGHLEKKMG HLACFAGGMF VLGADGSRMD KAGHYLELGA EIARTCHESY 501 550 ENSP00000348959/1-641 DRTALKLGPE SFKFDGAVEA VAVRQAEKYY ILRPEVIETY WYLWRFTHDP bmy_16450T0/1-425 DRTALKLGPE SFKFDGAVEA VAVRQAEKYY ILRPEVIETY WYLWRFTHDP BACU002670/1-605 DRTALKLGPE SFKFDGAVEA VAVRQAEKYY ILRPEVIETY WYLWRFTHDP ENSTTRP00000009995/1-641 DRTALKLGPE SFKFDGAVEA VAVRQAEKYY ILRPEVIETY WYLWRFTHDP ENSBTAP00000039687/1-643 DRTALKLGPE SFKFDGAVEA VAVRQAEKYY ILRPEVIETY WYLWRFTHDP 551 600 ENSP00000348959/1-641 RYRQWGWEAA LAIEKYCRVN GGFSGVKDVY SSTPTHDDVQ QSFFLAETL- bmy_16450T0/1-425 RYREWGWEAA LAIEKYCRVN GGFSGVKDVY SSTPTHDDVQ QSFFLAETLN BACU002670/1-605 RYREWGWEAA LAIEKYCRVN GGFSGVKDVY SSTPMHDDVQ QSFFLAETL- ENSTTRP00000009995/1-641 RYREWGWEAA LAIEKYCRVT GGFSGVKDVY SSTPTHDDVQ QSFFLAETL- ENSBTAP00000039687/1-643 RYREWGWEAA LAIEKYCRVS GGFSGVKDVY SSTPTHDDVQ QSFFLAETL- 601 650 ENSP00000348959/1-641 ---------- ---------- ---------- ---------- ---------- bmy_16450T0/1-425 RAGKYRTVGA KICGNNLPLK TQILLTVLSV KLSYLVVTAN TYVEMTSGTV BACU002670/1-605 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009995/1-641 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000039687/1-643 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000348959/1-641 ---------- ---------- ---------- ---KYLYLLF SGDDLLPLDH bmy_16450T0/1-425 TSSECLVFVD KRKIKEITIT VSRKDINVPI FKIKYLYLLF SSDDLLPLDH BACU002670/1-605 ---------- ---------- ---------- ---KL----- ---------- ENSTTRP00000009995/1-641 ---------- ---------- ---------- ---KYLYLLF SSDDLLPLDH ENSBTAP00000039687/1-643 ---------- ---------- ---------- ---KYLYLLF SGDDLLPLDH 701 750 ENSP00000348959/1-641 WVFNTEAHPL PVLHLANTTL SGNPAVR-- bmy_16450T0/1-425 WGIYRNSKN- ---------- --------- BACU002670/1-605 ---------- ---------- ---ETVRDS ENSTTRP00000009995/1-641 WVFNTEAHPL PVLHLANTTL SRNPAVR-- ENSBTAP00000039687/1-643 WVFNTEAHPL PVLHLANTTL SRNPAVR--