KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:49:46 2014 Check: 00 .. Name: ENSTTRP00000011917/1-531 Len: 538 Check: 5912 Weight: 1.00 Name: bmy_00266T0/1-358 Len: 538 Check: 3304 Weight: 1.00 Name: ENSP00000321455/1-530 Len: 538 Check: 9351 Weight: 1.00 Name: ENSBTAP00000039694/1-533 Len: 538 Check: 7608 Weight: 1.00 // 1 50 ENSTTRP00000011917/1-531 MAALRRLLRP PPRLPPPPCT PHPFPGPCGR SAXXXXXXXX XXXXXXXXXX bmy_00266T0/1-358 ---------- ---------- ---------- ---------- ---------- ENSP00000321455/1-530 MAALRRLLWP PPRVSPPLCA HQPLLGPWGR PAVTTLGLPG RPFSSREDEE ENSBTAP00000039694/1-533 MAALRRLLWP PPRLPPPCSP HHPAHGPWGR PAGTAPGPPG RPFSCREEDE 51 100 ENSTTRP00000011917/1-531 XXXXXXXXXX XXRWG-LSIA AAA-GGLVGL VCYQLYGDPR ADSARAPAPW bmy_00266T0/1-358 ---------- ---------- ---------- ---------- ---------- ENSP00000321455/1-530 RAVAEAAWRR RRRWGELSVA AAAGGGLVGL VCYQLYGDPR AGS---PATG ENSBTAP00000039694/1-533 GAVAEAAWRR RRRWRELSFA AAAGGGLVGL VCYQLYGDPR ADSARAAGPW 101 150 ENSTTRP00000011917/1-531 LASKSAAAEP EEPPRGRGLL PIPVAAAKET VAVGRTDIED LDLYATSRER bmy_00266T0/1-358 ---------- ---------- ---------- VAVGRTDIED LDLYATSREK ENSP00000321455/1-530 RPSKSAATEP EDPPRGRGML PIPVAAAKET VAIGRTDIED LDLYATSRER ENSBTAP00000039694/1-533 LPSDSAAAEP EDPPGGGGLF PIPVAAAKET VAVGRTEVED LDLYATSRER 151 200 ENSTTRP00000011917/1-531 RFRLFASVEC EGQLFMTPYD FILAVTTDEP KFAKTWKSLS KQELNQMLSE bmy_00266T0/1-358 RFRLFASVEC EGQLFMTPYD FILAVTTDEP KC-------- ---------- ENSP00000321455/1-530 RFRLFASIEC EGQLFMTPYD FILAVTTDEP KVAKTWKSLS KQELNQMLAE ENSBTAP00000039694/1-533 RFRLFASIEC EGQLFMTPYD FILAVTTDEP KIAKTWKSLS KQELNQMLSE 201 250 ENSTTRP00000011917/1-531 TPPVWKGSSK LFRSLKERGV ISYTEYLFLL CILTKPHAGF RIAFNMFDTD bmy_00266T0/1-358 ---------- ---------V ISYTEYLFLL CILTKPHAGF RIAFNMFDTD ENSP00000321455/1-530 TPPVWKGSSK LFRNLKEKGV ISYTEYLFLL CILTKPHAGF RIAFNMFDTD ENSBTAP00000039694/1-533 TPPVWKGSSK LFRNLKEKGV ISYTEYLFLL CILTKPHAGF RIAFNMFDTD 251 300 ENSTTRP00000011917/1-531 GNEMVDKKEF LVLQEIFRKK NEKRETKGDE EKRAMLRLQL YGYHSPTNSV bmy_00266T0/1-358 GNEMVDKKEF LVLQEIFRKK NEKRETKGDE EKRAML---- ---------V ENSP00000321455/1-530 GNEMVDKKEF LVLQEIFRKK NEKREIKGDE EKRAMLRLQL YGYHSPTNSV ENSBTAP00000039694/1-533 GNEMVDKKEF LVLQEIFRKK NEKRETKGDE EKRAMLRLQL YGYHSPTNSV 301 350 ENSTTRP00000011917/1-531 LKTDAEELVS RSYWDTLRRN TSQALFSDLA EXXXXXXXXX XXXXXXXXXX bmy_00266T0/1-358 LKTDAEELVS RSYWDTLRRN TSQALFSDLA ERADDITNLV TDTTLLVHFF ENSP00000321455/1-530 LKTDAEELVS RSYWDTLRRN TSQALFSDLA ERADDITSLV TDTTLLVHFF ENSBTAP00000039694/1-533 LKTDAEELVS RSYWDTLRRN TSQALFSDFA ERADDITNLV TDTTLLVHFF 351 400 ENSTTRP00000011917/1-531 XXXXXXXXXX XXFYRFMDNL QTEVLEIEFL SYSNGMNTIS EEDFAHILLR bmy_00266T0/1-358 GKKGKAELNF EDFYRFMDNL QTEVLEIEFL SYSNGMNTIS EEDFAHILLR ENSP00000321455/1-530 GKKGKAELNF EDFYRFMDNL QTEVLEIEFL SYSNGMNTIS EEDFAHILLR ENSBTAP00000039694/1-533 GKKGKAELNF EDFYRFMDNL QTEVLEIEFL SYSNGMNTIS EEDFAHILLR 401 450 ENSTTRP00000011917/1-531 YTNVENTSVF LENVRYSIPE EKGITFDEFR SFFQFLNNLE DFAIALNMYN bmy_00266T0/1-358 YTNVENTSVF LENVRYSIPE EKGITFDEFR SFFQFLNNLE DFAIALNMYN ENSP00000321455/1-530 YTNVENTSVF LENVRYSIPE EKGITFDEFR SFFQFLNNLE DFAIALNMYN ENSBTAP00000039694/1-533 YTNVENTSVF LENVRYSIPE EKGITFDEFR SFFQFLNNLE DFAIALNMYN 451 500 ENSTTRP00000011917/1-531 FASRSIGQDE FKRAVYVATG LRLSPHLVNT VFKIFDVDKD DQLSYKEFIG bmy_00266T0/1-358 FASRSIGQDE FKRAVYVATG LRLSPHLVNT VFKIFDVDKD DQLSYKEFIG ENSP00000321455/1-530 FASRSIGQDE FKRAVYVATG LKFSPHLVNT VFKIFDVDKD DQLSYKEFIG ENSBTAP00000039694/1-533 FASRSIGQDE FKRAVYVATG LKLSPHLVNT VFKIFDVDKD DQLSYKEFIG 501 550 ENSTTRP00000011917/1-531 IMKDRLHRGF RGY--KTVQK YPTFKSCLKK ELHSR--- bmy_00266T0/1-358 IMKDRLHRGF RVLLKQSLKD YYLLENARSK NFRGRKQV ENSP00000321455/1-530 IMKDRLHRGF RGY--KTVQK YPTFKSCLKK ELHSR--- ENSBTAP00000039694/1-533 IMKDRLHRGF RGY--KTVQK YPTFKSCLKK ELHSR---