KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:47 2014 Check: 00 .. Name: bmy_04489T0/1-1044 Len: 1090 Check: 9464 Weight: 1.00 Name: ENSTTRP00000014549/1-1035 Len: 1090 Check: 6662 Weight: 1.00 Name: ENSP00000369042/1-1038 Len: 1090 Check: 4243 Weight: 1.00 Name: ENSBTAP00000039739/1-1038 Len: 1090 Check: 4261 Weight: 1.00 Name: BACU004456/1-976 Len: 1090 Check: 4155 Weight: 1.00 // 1 50 bmy_04489T0/1-1044 ELRGKEYDPE VWGGLEGCIP FGPCPFGDIE KHREKETENC AEKPKGAKKR ENSTTRP00000014549/1-1035 ---------- ---------- ---------- ----MDPNTI IEALRGTMD- ENSP00000369042/1-1038 ---------- ---------- ---------- ----MDPNTI IEALRGTMD- ENSBTAP00000039739/1-1038 ---------- ---------- ---------- ----MDPNTI IEALRGTMD- BACU004456/1-976 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_04489T0/1-1044 NFNLTYFGDL ALLSEIVLFG FMLAHKSLNF VSTLLQITMS EQLDLPVRQA ENSTTRP00000014549/1-1035 ---------- PALREAAERQ LNEXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369042/1-1038 ---------- PALREAAERQ LNEAHKSLNF VSTLLQITMS EQLDLPVRQA ENSBTAP00000039739/1-1038 ---------- PALREAAERQ LNEAHKSLNF VSTLLQITMS EQLDLPVRQA BACU004456/1-976 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_04489T0/1-1044 GKFPELFSWM YVNNIISKYW PDRETAPGDI SPYTIPEEDR HCIRENIVEA ENSTTRP00000014549/1-1035 XV-------I YLKNMITQYW PDRETAPGDI SPYTIPEEDR HCIRENIVEA ENSP00000369042/1-1038 GV-------I YLKNMITQYW PDRETAPGDI SPYTIPEEDR HCIRENIVEA ENSBTAP00000039739/1-1038 GV-------I YLKNMITQYW PDRETAPGDI SPYTIPEEDR HCIRENIVEA BACU004456/1-976 ---------- ----MITQYW PDRETAPGDI FPYTIPEEDQ HCIRENIVEA 151 200 bmy_04489T0/1-1044 IIHSPELIRV QLTTCIHHII KHDYPSRWTA IVDKIGFYLQ SDNSACWLGI ENSTTRP00000014549/1-1035 IIHSPELIR- QLTTCIHHII KHDYPSRWTA IVDKIGFY-Q SDNSACWLG- ENSP00000369042/1-1038 IIHSPELIRV QLTTCIHHII KHDYPSRWTA IVDKIGFYLQ SDNSACWLGI ENSBTAP00000039739/1-1038 IIHSPELIRV QLTTCIHHII KHDYPSRWTA IVDKIGFYLQ SDNSACWLGI BACU004456/1-976 IIHSPELIRV QLTTCIHHII KHDYPSCWTA IVGKIGFYLQ SDNSACWLGI 201 250 bmy_04489T0/1-1044 LLCLYQLVKN YEYKKPEERS PLVAAMQHFL PVLKDRFIQL LSDQSDQSVL ENSTTRP00000014549/1-1035 LLCLYQLVKN YEYKKPEERS PLVAAMQHFL PVLKDRFIQL LSDQSDQSVL ENSP00000369042/1-1038 LLCLYQLVKN YEYKKPEERS PLVAAMQHFL PVLKDRFIQL LSDQSDQSVL ENSBTAP00000039739/1-1038 LLCLYQLVKN YEYKKPEERS PLVAAMQHFL PVLKDRFIQL LSDQSDQSVL BACU004456/1-976 LLCLYQLVKN YEYKKPEERS PLVAAMQHFL PVLKDRFIQL LSDQSDQSVL 251 300 bmy_04489T0/1-1044 IQKQIFKIFY ALVQYTLPLE LINQQNLTEW IEILKTVVNR DVPNETLQVE ENSTTRP00000014549/1-1035 IQKQIFKIFY ALVQYTLPLE LINQQNLTEW IEILKTVVNR DVPNETLQVE ENSP00000369042/1-1038 IQKQIFKIFY ALVQYTLPLE LINQQNLTEW IEILKTVVNR DVPNETLQVE ENSBTAP00000039739/1-1038 IQKQIFKIFY ALVQYTLPLE LINQQNLTEW IEILKTVVNR DVPNETLQVE BACU004456/1-976 IQKQIFKIFY ALVQYTLPLE LINQQNLTEW IEILKTVVNR DVPNETLQVE 301 350 bmy_04489T0/1-1044 EDDRPELPWW KCKKWALHIL ARLFERYGSP GNVSKEYNEF AEVFLKAFAV ENSTTRP00000014549/1-1035 EDDRPELPWW KCKKWALHIL ARLFERYGSP GNVSKEYNEF AEVFLKAFAV ENSP00000369042/1-1038 EDDRPELPWW KCKKWALHIL ARLFERYGSP GNVSKEYNEF AEVFLKAFAV ENSBTAP00000039739/1-1038 EDDRPELPWW KCKKWALHIL ARLFERYGSP GNVSKEYNEF AEVFLKAFAV BACU004456/1-976 EDDRPELPWW KCKKWALHIL ARLFERYGSP GNVSKEYNEF AEVFLKAFAV 351 400 bmy_04489T0/1-1044 GVQQVLLKVL YQYKEKQYMA PRVLQQTLNY INQGVSHALT WKNLKPHIQG ENSTTRP00000014549/1-1035 GVQQVLLKVL YQYKEKQYMA PRVLQQTLNY INQGVSHALT WKNLKPHIQG ENSP00000369042/1-1038 GVQQVLLKVL YQYKEKQYMA PRVLQQTLNY INQGVSHALT WKNLKPHIQG ENSBTAP00000039739/1-1038 GVQQVLLKVL YQYKEKQYMA PRVLQQTLNY INQGVSHALT WKNLKPHIQG BACU004456/1-976 GVQQVLLKVL YQYKEKQYMA PRVLQQTLNY INQGVSHALT WKNLKPHIQG 401 450 bmy_04489T0/1-1044 IIQDVIFPLM CYTDADEELW QEDPYEYIRM KFDVFEDFIS PTTAAQTLLF ENSTTRP00000014549/1-1035 IIQDVIFPLM CYTDADEELW QEDPYEYIRM KFDVFEDFIS PTTAAQTLLF ENSP00000369042/1-1038 IIQDVIFPLM CYTDADEELW QEDPYEYIRM KFDVFEDFIS PTTAAQTLLF ENSBTAP00000039739/1-1038 IIQDVIFPLM CYTDADEELW QEDPYEYIRM KFDVFEDFIS PTTAAQTLLF BACU004456/1-976 IIQDVIFPLM CYTDADEELW QEDPYEYIRM KFDVFEDFIS PTTAAQTLLF 451 500 bmy_04489T0/1-1044 TACSKRKEVL QKTMGFCYQI LTEPNADPRK KDGALHMIGS LAEILLKKKI ENSTTRP00000014549/1-1035 TACSKRKEVL QKTMGFCYQI LTEPNADPRK KDGALHMIGS LAEILLKKKI ENSP00000369042/1-1038 TACSKRKEVL QKTMGFCYQI LTEPNADPRK KDGALHMIGS LAEILLKKKI ENSBTAP00000039739/1-1038 TACSKRKEVL QKTMGFCYQI LTEPNADPRK KDGALHMIGS LAEILLKKKI BACU004456/1-976 TACSKRKEVL QKTMGFCYQI LTEPNADPRK KDGALHMIGS LAEILLKKKI 501 550 bmy_04489T0/1-1044 YKDQMEYMLQ NHVFPLFSSE LGYMRARACW VLHYFCEVKF KSDQNLQTAL ENSTTRP00000014549/1-1035 YKDQMEYMLQ NHVFPLFSSE LGYMRARACW VLHYFCEVKF KSDQNLQTAL ENSP00000369042/1-1038 YKDQMEYMLQ NHVFPLFSSE LGYMRARACW VLHYFCEVKF KSDQNLQTAL ENSBTAP00000039739/1-1038 YKDQMEYMLQ NHVFPLFSSE LGYMRARACW VLHYFCEVKF KSDQNLQTAL BACU004456/1-976 YKDQMEYMLQ NHVFPLFSSE LGYMRARACW VLHYFCEVKF KSDQNLQTAL 551 600 bmy_04489T0/1-1044 ELTRRCLIDD REMPVKVEAA IALQVLISNQ EKAKEYITPF IRPVMQALLH ENSTTRP00000014549/1-1035 ELTRRCLIDD REMPVKVEAA IALQVLISNQ EKAKEYITPF IRPVMQALLH ENSP00000369042/1-1038 ELTRRCLIDD REMPVKVEAA IALQVLISNQ EKAKEYITPF IRPVMQALLH ENSBTAP00000039739/1-1038 ELTRRCLIDD REMPVKVEAA IALQVLISNQ EKAKEYITPF IRPVMQALLH BACU004456/1-976 ELTRRCLIDD REMPVKVEAA IALQVLISNQ EKAKEYITPF IRPVMQALLH 601 650 bmy_04489T0/1-1044 IIRETENDDL TNVIQKMICE YSEEVTPIA- ------AMTF NQVIQTGPDE ENSTTRP00000014549/1-1035 IIRETENDDL TNVIQKMICE YSEEVTPIAV EMTQHLAMTF NQVIQTGPDE ENSP00000369042/1-1038 IIRETENDDL TNVIQKMICE YSEEVTPIAV EMTQHLAMTF NQVIQTGPDE ENSBTAP00000039739/1-1038 IIRETENDDL TNVIQKMICE YSEEVTPIAV EMTQHLAMTF NQVIQTGPDE BACU004456/1-976 IIRETENDDL TNVIQKMICE YSEEVTPIAV EMTQHLAMTF NQVIQTGPDE 651 700 bmy_04489T0/1-1044 EGSDDKAVTA MGILNTIDTL LSVVEDHKEI TQQLEGICLQ VIGTVLQQHV ENSTTRP00000014549/1-1035 EGSDDKAVTA MGILNTIDTL LSVVEDHKEI TQQLEGICLQ VIGTVLQQHV ENSP00000369042/1-1038 EGSDDKAVTA MGILNTIDTL LSVVEDHKEI TQQLEGICLQ VIGTVLQQHV ENSBTAP00000039739/1-1038 EGSDDKAVTA MGILNTIDTL LSVVEDHKEI TQQLEGICLQ VIGTVLQQHV BACU004456/1-976 EGSDDKAVTA MGILNTIDTL LSVVEDHKEI TQQLEGICLQ VIGTVLQQHV 701 750 bmy_04489T0/1-1044 LEFYEEIFSL AHSLTCQQVS PQMWQLLPLV FEVFQQDGFD YFTDMMPLLH ENSTTRP00000014549/1-1035 LEFYEEIFSL AHSLTCQQVS PQMWQLLPLV FEVFQQDGFD YFTDMMPLLH ENSP00000369042/1-1038 LEFYEEIFSL AHSLTCQQVS PQMWQLLPLV FEVFQQDGFD YFTDMMPLLH ENSBTAP00000039739/1-1038 LEFYEEIFSL AHSLTCQQVS PQMWQLLPLV FEVFQQDGFD YFTDMMPLLH BACU004456/1-976 LEFYEEIFSL AHSLTCQQVS PQMWQLLPLV FEVFQQDGFD YFTDMMPLLH 751 800 bmy_04489T0/1-1044 NYVTVDTDTL LSDTKYLEMI YSMCKKVLTG VAGEDAECHA AKLLEVIILQ ENSTTRP00000014549/1-1035 NYVTVDTDTL LSDTKYLEMI YSMCKKVLTG VAGEDAECHA AKLLEVIILQ ENSP00000369042/1-1038 NYVTVDTDTL LSDTKYLEMI YSMCKKVLTG VAGEDAECHA AKLLEVIILQ ENSBTAP00000039739/1-1038 NYVTVDTDTL LSDTKYLEMI YSMCKKVLTG VAGEDAECHA AKLLEVIILQ BACU004456/1-976 NYVTVDTDTL LSDTKYLEMI YSMCKKVLTG VAGEDAECHA AKLLEVIILQ 801 850 bmy_04489T0/1-1044 CKGRGIDQCI PLFVEAALER LTREVKTSEL RTMCLQVAIA ALYYNPHLLL ENSTTRP00000014549/1-1035 CKGRGIDQCI PLFVEAALER LTREVKTSEL RTMCLQVAIA ALYYNPHLLL ENSP00000369042/1-1038 CKGRGIDQCI PLFVEAALER LTREVKTSEL RTMCLQVAIA ALYYNPHLLL ENSBTAP00000039739/1-1038 CKGRGIDQCI PLFVEAALER LTREVKTSEL RTMCLQVAIA ALYYNPHLLL BACU004456/1-976 CKGRGIDQCI PLFVEAALER LTREVKTSEL RTMCLQVAIA ALYYNPHLLL 851 900 bmy_04489T0/1-1044 NTLENLRFPN NVEPVTNHFI TQWLNDVDCF LGLHDRKMCV LGLCALIDME ENSTTRP00000014549/1-1035 NTLENLRFPN NVEPVTNHFI TQWLNDVDCF LGLHDRKMCV LGLCALIDME ENSP00000369042/1-1038 NTLENLRFPN NVEPVTNHFI TQWLNDVDCF LGLHDRKMCV LGLCALIDME ENSBTAP00000039739/1-1038 NTLENLRFPN NVEPVTNHFI TQWLNDVDCF LGLHDRKMCV LGLCALIDME BACU004456/1-976 NTLENLRFPN NVEPVTNHFI TQWLNDVDCF LGLHDRKMCV LGLCALIDME 901 950 bmy_04489T0/1-1044 QIPQVLNQVS GQILPAFILL FNGLKRAYAC HAEHENDSDD DDEAEDDDET ENSTTRP00000014549/1-1035 QIPQVLNQVS GQILPAFILL FNGLKRAYAC HAEHENDSDD DDEAEDDDET ENSP00000369042/1-1038 QIPQVLNQVS GQILPAFILL FNGLKRAYAC HAEHENDSDD DDEAEDDDET ENSBTAP00000039739/1-1038 QIPQVLNQVS GQILPAFILL FNGLKRAYAC HAEHENDSDD DDEAEDDDET BACU004456/1-976 QIPQVLNQVS GQILPAFILL FNGLKRAYAC HAEHENDSDD DDEAEDDDET 951 1000 bmy_04489T0/1-1044 EELGSDEDDI DEDGQEYLEI LAKQAGEDGD DEDWEEDDAE ETALEGYSTI ENSTTRP00000014549/1-1035 EELGSDEDDI DVDGQEYLEI LAKQAGEDGD DEDWEEDDAE ETALEGYSTI ENSP00000369042/1-1038 EELGSDEDDI DEDGQEYLEI LAKQAGEDGD DEDWEEDDAE ETALEGYSTI ENSBTAP00000039739/1-1038 EELGSDEDDI DEDGQEYLEI LAKQAGEDGD EEDWEEDDAE ETALEGYSTI BACU004456/1-976 EELGSDEDDI DEDGQEYLEI LAKQAGEDGD DEDWEEDDAE ETALEGYSTI 1001 1050 bmy_04489T0/1-1044 IDDEDNPVDE YQIFKAIFQ- ---------- ---------- ---------- ENSTTRP00000014549/1-1035 IDDEDNPVDE YQIFKAIFQT IQNRNPVWYQ ALTHGLNEEQ RKQLQDIATL ENSP00000369042/1-1038 IDDEDNPVDE YQIFKAIFQT IQNRNPVWYQ ALTHGLNEEQ RKQLQDIATL ENSBTAP00000039739/1-1038 IDDEDNPVDE YQIFKAIFQT IQNRNPVWYQ ALTHGLNEEQ RKQLQDIATL BACU004456/1-976 IDDEDNPVDE YQIFKAIFQT IQNRNPVWYQ ALTHGLNEEQ RKQLQDIATL 1051 1100 bmy_04489T0/1-1044 --------KS KMIEKHGGYK FSAPVVPSSF NFGGPAPGMN ENSTTRP00000014549/1-1035 ADQRRAAHES KMIEKHGGYK FSAPVVPSSF NFGGPAPGMN ENSP00000369042/1-1038 ADQRRAAHES KMIEKHGGYK FSAPVVPSSF NFGGPAPGMN ENSBTAP00000039739/1-1038 ADQRRAAHES KMIEKHGGYK FSAPVVPSSF NFGGPAPGMN BACU004456/1-976 ADQRRAAHES KMIEKHGGYK FSAPVVPSSF NFGGPAPGMN