KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:48 2014 Check: 00 .. Name: ENSP00000230792/1-462 Len: 465 Check: 8581 Weight: 1.00 Name: ENSBTAP00000039749/1-444 Len: 465 Check: 4605 Weight: 1.00 Name: ENSTTRP00000000998/1-465 Len: 465 Check: 2183 Weight: 1.00 Name: bmy_15452T0/1-461 Len: 465 Check: 100 Weight: 1.00 Name: BACU014812/1-461 Len: 465 Check: 9231 Weight: 1.00 // 1 50 ENSP00000230792/1-462 MSSVKRSLKQ EIVTQFHCSA AEGDIAKLTG ILSHSPSLLN ETSENGWTAL ENSBTAP00000039749/1-444 MSSVKRSLNQ EIISQFHYSA AEGDIAKLTA ILSHSPSLLN ETSENGWSAL ENSTTRP00000000998/1-465 MSSVKRSPNQ EITSQFHCSA AEGDIARLTV MLSHSPSLLN ETSENGWTAL bmy_15452T0/1-461 MSSVKRSPNQ EIISQFHYSA AEGDIARLTV MLSHSPSLLN ETSENGWTAL BACU014812/1-461 MSSVKRSPNQ EIISQFHYSA AEGDIARLTV MLSHSPSLLN ETSENGWTAL 51 100 ENSP00000230792/1-462 MYAARNGHPE IVQFLLEKGC DRSIVNKSRQ TALDIAVFWG YKHIANLLAT ENSBTAP00000039749/1-444 I--------- ---------C DRSIVNKSRQ TALDIAKFWG YKHIANLLAN ENSTTRP00000000998/1-465 MYAARNGHPD VVQFLLEKGC DRSIINKSRQ TALDIAKFWG YKHIANLLAN bmy_15452T0/1-461 MYAARNGHPD VVQFLLEKGC DRSIINKSRQ TALDIAEFWG YKHIXNLLAN BACU014812/1-461 MYAARNGHPD VVQFLLEKGC DRSIINKSRQ TALDIAEFWG YKHIANLLAN 101 150 ENSP00000230792/1-462 AKGGKKPWFL TNEVEECENY FSKTLLDRKS EKRNNSDWLL AKESHPATVF ENSBTAP00000039749/1-444 AKGGKKPWFL TNEVEECENY FSKTLLDRKS EKRNNSDWLL AKESHPATVY ENSTTRP00000000998/1-465 AKGGKKPWFL TSEMEECENY FSKTLLDRKS EKRNNSDWLL AKESHPATVY bmy_15452T0/1-461 AKGGKKPWFL TSEMEECENY FSKTLLDRKS EKRNNSDWLL AKESHPATVY BACU014812/1-461 AKGGKKPWFL TSEIEECENY FSKTLLDRKS EKRNNSDWLL AKESHPATVY 151 200 ENSP00000230792/1-462 ILFSDLNPLV TLGGNKESFQ QPEVRLCQLN YTDIKDYLAQ PEKITLIFLG ENSBTAP00000039749/1-444 ILFSDLNPLV TLGGNKESFQ QPEVRLCQLN YTDIKDYLAQ PEKITLIFLG ENSTTRP00000000998/1-465 ILFSDLNPLV TLGGNEESFQ QPEVRLCQLN YTDIKDYLAQ PEKITLIFLG bmy_15452T0/1-461 ILFSDLNPLV TLGGNKESFQ QPEVRLCQLN YTEIKDYLAQ PEKITLIFLG BACU014812/1-461 ILFSDLNPLV TLGGNKESFQ QPEVRLCQLN YTDIKDYLAQ PEKITLIFLG 201 250 ENSP00000230792/1-462 VELEIKDKLL NYAGEVPRE- --EEDGLVAW FALGIDPIAA EEFKQRHENC ENSBTAP00000039749/1-444 VELEMKKEFF NYAGEISKE- --EEDGLVAW FALGIDTVAA EEFKQRHENC ENSTTRP00000000998/1-465 VELEMKKELF SYAGEVSQEK DAEKDALVAW FALGIDPVAA EEFKQRHENC bmy_15452T0/1-461 VELEMKKELF NYAGEVSQ-- --EKDALVAW FALGIDPVAA EEFKQRHENC BACU014812/1-461 VELEMKKELF NYAGEVSQ-- --EKDALVAW FALGIDPVAA EEFKQRHENC 251 300 ENSP00000230792/1-462 YFLHPPMPAL LQLKEKEAGV VAQARSVLAW HSRYKFCPTC GNATKIEEGG ENSBTAP00000039749/1-444 YFLHPPMPAL LQLKEKEAGV VAQARSVLAW HSRYKFCPTC GNATKIEEGG ENSTTRP00000000998/1-465 YFLHPPMPAL LQLKEKEAGV VAQARSVLAW HSRYKFCPTC GSATKIEEGG bmy_15452T0/1-461 YFLHPPMPAL LQLKEKEAGV VAQARSVLAW HSRYKFCPTC GSATKIEEGG BACU014812/1-461 YFLHPPMPAL LQLKEKEAGV VAQARSVLAW HSRYKFCPTC GSATKIEEGG 301 350 ENSP00000230792/1-462 YKRLCLKEDC PSLNGVHNTS YPRVDPVVIM QVIHPDGTKC LLGRQKRFPP ENSBTAP00000039749/1-444 YKRVCLKEDC PSLHGVHNTS YPRVDPVVIM QVIHPDGTKC LLGRQKRFPP ENSTTRP00000000998/1-465 YKRVCLKEDC PSLHGVHNTS YPRVDPVVIM QVIHPDGTKC LLGRQKRFPP bmy_15452T0/1-461 YKRVCLKEDC PSLHGVHNTS YPRVDPVVIM QVIHPDGTKC LLGRQKRFPP BACU014812/1-461 YKRVCLKEDC PSLHGVHNTS YPRVDPVVIM QVIHPDGTKC LLGRQKRFPP 351 400 ENSP00000230792/1-462 GMFTCLAGFI EPGETIEDAV RREVEEESGV KVGHVQYVAC QPWPMPSSLM ENSBTAP00000039749/1-444 GMFTCLAGFI EPGETIEDAV RREVEEESGV KVGHVQYVSC QPWPMPSSLM ENSTTRP00000000998/1-465 GMFTCLAGFI EPGETIEDAV RREVEEESGV KVGRVQYVSC QPWPMPSSLM bmy_15452T0/1-461 GMFTCLAGFI EPGETIEDAV RREVEEESGV KVGHVQYVSC QPWPMPSSLM BACU014812/1-461 GMFTCLAGFI EPGETIEDAV RREVEEESGV RVGHVQYVSC QPWPMPSSLM 401 450 ENSP00000230792/1-462 IGCLALAVST EIKVDKNEIE DARWFTREQV LDVLTKGKQQ AFFVPPSRAI ENSBTAP00000039749/1-444 IGCLAVAVST EIKVDKNEIE DARWFTREQV VDVLTKGKQQ AFFVPPSRAI ENSTTRP00000000998/1-465 IGCLAVAVST EIKVDKNEIE DARWFTREQV VDVLTKGKQQ AFFVPPSRAI bmy_15452T0/1-461 IGCLAVAVST EIKVDKNEIE DARWFTREQV VDVLTKGKQQ AFFVPPSRAI BACU014812/1-461 IGCLAVAVST EIKVDKNEIE DARWFTREQV VDVLTKGKQQ AFFVPPSRAI 451 500 ENSP00000230792/1-462 AHQLIKHWIR INPNL ENSBTAP00000039749/1-444 AHQLIKHWIG MNPNL ENSTTRP00000000998/1-465 AHQLIKHWIG MNPNL bmy_15452T0/1-461 AHQLIKHWIG MNPNL BACU014812/1-461 AHQLIKHWIG MNPNL