KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:48 2014 Check: 00 .. Name: ENSP00000334592/1-501 Len: 523 Check: 5367 Weight: 1.00 Name: ENSBTAP00000039756/1-509 Len: 523 Check: 1842 Weight: 1.00 Name: BACU005635/1-477 Len: 523 Check: 5102 Weight: 1.00 Name: bmy_07195T0/1-523 Len: 523 Check: 7774 Weight: 1.00 Name: ENSTTRP00000003411/1-454 Len: 523 Check: 4788 Weight: 1.00 // 1 50 ENSP00000334592/1-501 ---------- ---------- --MWKLWRAE EGAAALGGAL FLLLFALGVR ENSBTAP00000039756/1-509 ---------- ---AGLQPPP QAMWEPHSAE AFVAALGGVF FLLLFALGVR BACU005635/1-477 MRRGWSARRV PGRCGFAAPA RTMWEPQGAE AFAAALGGAL FLLLFALGVR bmy_07195T0/1-523 MRRGWSARRV PGRCGVAAPA RAMWEPHGAE AFAAALGGAL FLLLFALGVR ENSTTRP00000003411/1-454 ----W----- ---------- ---WEPRGAE AFAAALSSTL -LLLFALGVR 51 100 ENSP00000334592/1-501 QLLKQRRPMG FPPGPPGLPF IGNIYSLAAS SELPHVYMRK QSQVYGEIFS ENSBTAP00000039756/1-509 QLLKQRRPSG FPPGPSGLPF IGNIYSLAAS AELPHVYMKK QSQVYGEIFS BACU005635/1-477 QLLKQRRPSG FPPGPSGLPF IGNIYSLGAS AELPYVYMKK QSQVYGEIFS bmy_07195T0/1-523 QLLKQRRPSG FPPGPSGLPF IGNIYSLGAS AELPHVYMKK QSQVYGEIFS ENSTTRP00000003411/1-454 Q--------- ---------- ---------- ---------- -------IFS 101 150 ENSP00000334592/1-501 LDLGGISTVV LNGYDVVKEC LVHQSEIFAD RPCLPLFMKM TKMGGLLNSR ENSBTAP00000039756/1-509 LDLGGISAVV LNGYDVVKEC LVHQSEIFAD RPCLPLFMKM TKMGVLIN-R BACU005635/1-477 LDLGGISAVV LNGYDVVKEC LVHQSEIFAD RPCLPLFMKM TKMGGLLNSR bmy_07195T0/1-523 LDLGGISAVV LNGYDVVKEC LVHQSEIFAD RPCLPLFMKM TKMGGLLNSR ENSTTRP00000003411/1-454 LDLGGISAVV LNGYDVVKEC LVHQSEIFAD RPCLPLFMKM TKMGGLLNSR 151 200 ENSP00000334592/1-501 YGRGWVDHRR LAVNSFRYFG YGQKSFESKI LEETKFFNDA IETYKGRPFD ENSBTAP00000039756/1-509 YGRGWVDHRK LAVNSFRCFG YGQKSFESKI LEETKFFIDA VETYNGSPFD BACU005635/1-477 YGRGWVDHRK LAVNSFRCFG YGQKSFESKI LEETKFFIDA IETYNGSPFD bmy_07195T0/1-523 YGRGWVDHRK LAVNSFRCFG YGQKSFESKI LEETKFFIDA IETYNGSPFD ENSTTRP00000003411/1-454 YGRGWVDHRK LAVNSFRCFG YGQKSFESKI LEETKFFIDA IETYNGSPFD 201 250 ENSP00000334592/1-501 FKQLITNAVS NITNLIIFGE RFTYEDTDFQ HMIELFSENV ELAASASVFL ENSBTAP00000039756/1-509 LKQLVTNAVS NITNLVIFGE RFTYEDTDFQ HMIELFSENV ELAASATVFL BACU005635/1-477 FKQLITNAVS NITNLIIFGE RFTYEDTDFQ HMIELFSENV ELATNAAVFL bmy_07195T0/1-523 FKQLITNAVS NITNLIIFGE RFTYEDTDFQ HMIELFSENV ELATNAAVFL ENSTTRP00000003411/1-454 FKQLITNAVS NITNLIIFGE RFTYEDTDFQ HMIELFSENV ELATDASVFL 251 300 ENSP00000334592/1-501 YNAFPWIGIL PFGKHQQLFR NAAVVYDFLS RLIEKASVNR KPQLPQHFVD ENSBTAP00000039756/1-509 YNAFPWIGIL PFGKHQQLFR NAAVVYDFLS RLIEKASINR KPQLPQHFVD BACU005635/1-477 YNAFPWIGIL PFGKHQQLFR NAAVVYDFLS RLIEKASINR KPQLPQHFVD bmy_07195T0/1-523 YNAFPWIGIL PFGKHQQLFR NAAVVYDFLS RLIEKASINR KPQLPQHFVD ENSTTRP00000003411/1-454 YNAFPWIGIL PFGKHQQLFR NAAVVYDFLS RLIEKVSINR KPQLPQHFVD 301 350 ENSP00000334592/1-501 AYLDEMDQGK NDPSSTFSKE NLIFSVGELI IAGTETTTNV LRWAILFMAL ENSBTAP00000039756/1-509 AYLDEMERSK NDPSSTFSKE NLIFSVGELI IAGTETTTNV LRWAVLFMAL BACU005635/1-477 AYLDEMDQGK NDPSSTFSKE NLIFSVGELI IAGTETTTNV LRWAILFMAL bmy_07195T0/1-523 AYLDEMDQGK NDPSSTFSKE NLIFSVGELI IAGTETTTNV LRWAILFMAL ENSTTRP00000003411/1-454 AYLDEMDQGK NDPSSTFSKE NLIFSVGELI IAGTETTTNV LRWAILFMAL 351 400 ENSP00000334592/1-501 YPNIQGQVQK EIDLIMGPNG KPSWDDKCKM PYTEAVLHEV LRFCNIVPLG ENSBTAP00000039756/1-509 YPNIQGQVQK EIDLIIGPSG KPSWDEKCKM PYTEAVLHEV LRFCNIVPLG BACU005635/1-477 YPNIQGQVQK EIDLIIGPSG TPSWDDKCKM PYTEAVLHEV LRFCNIVPLG bmy_07195T0/1-523 YPNIQGQVQK EIDLIIGPSG TPSWDDKCKM PYTEAVLHEV LRFCNIVPLG ENSTTRP00000003411/1-454 YPNIQGQVQK EIDLIIGPSG TPSWDDKCKM PYTEAVLHEV LRFCNIVPLG 401 450 ENSP00000334592/1-501 IFHATSEDAV VRGYSIPKGT TVITNLYSVH FDEKYWRDPE VFHPERFLDS ENSBTAP00000039756/1-509 IFHATSEDAV VRGYSIPKGT TVITNLYSVH FDEKYWRDPE IFYPERFLDS BACU005635/1-477 IFHATSEDAV VRGYSIPKGT TVITNLYSVH FDEKYWRDPE IFYPDRFLDS bmy_07195T0/1-523 IFHATSEDAV VRGYSIPKGT TVITNLYSVH FDEKYWRDPE IFYPDRFLDS ENSTTRP00000003411/1-454 IFHATSEDAV VRGYSIPKGT TVITNLYSVH FDEKYWRDPE IFYPDRFLDS 451 500 ENSP00000334592/1-501 SGYFAKKEAL VPFSLGRRHC LGEHLARMEM FLFFTALLQR FHLHFPHELV ENSBTAP00000039756/1-509 SGHFAKKEAL IPFSLGRRHC LGEQLARMEM FLFFTALLQR FHLHFPHELV BACU005635/1-477 NGYFAKKEAF VPFSLAI--- ---------- ---------- -------ECA bmy_07195T0/1-523 NGYFAKKEAL VPFSLGRRHC LGEQLARMEM FLFFTTLLQR FHLHFPNELV ENSTTRP00000003411/1-454 NGYFAKKEAL VPFSLGRRHC LGEQLARMEM FLFFTTLLQR FHLHFPHELV 501 550 ENSP00000334592/1-501 PDLKPRLGMT LQPQPYLICA ERR ENSBTAP00000039756/1-509 PNLKPRLGMT LQPQPYLICA ERR BACU005635/1-477 PSAEVKV--- ---------- --- bmy_07195T0/1-523 PNLKPRLGMT LQPQPYLICA ERR ENSTTRP00000003411/1-454 PNLKPRLGMT LQPQPYLICT ERR