KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:51 2014 Check: 00 .. Name: ENSP00000419038/1-751 Len: 775 Check: 8738 Weight: 1.00 Name: ENSBTAP00000039865/1-756 Len: 775 Check: 3252 Weight: 1.00 Name: BACU000453/1-711 Len: 775 Check: 2885 Weight: 1.00 Name: bmy_18512T0/1-510 Len: 775 Check: 3683 Weight: 1.00 Name: ENSTTRP00000001639/1-755 Len: 775 Check: 9173 Weight: 1.00 // 1 50 ENSP00000419038/1-751 MRLLGAAAV- ---AALGRG- --RAPASLGW QRKQVNWKAC RWSSSGVIPN ENSBTAP00000039865/1-756 MRLLGAAAA- ---AAVGRGP LPRVPAALGW QGKQANWKIC RWCSSGVIPN BACU000453/1-711 MRLLGTAVAA AA-AAVESRL LPRVPAALGW QWKQANWKIC RWCSSGVIPN bmy_18512T0/1-510 ---------- ---------- ---------- ----ANWKIC RWCSSGVIPN ENSTTRP00000001639/1-755 MRLLGTAAAA AAAAAVESRP LPRVPTALCW QWKQANWKIC RWCSSGVIPN 51 100 ENSP00000419038/1-751 EKIRNIGISA HIDSGKTTLT ERVLYYTGRI AKMHEVKGKD GVGAVMDSME ENSBTAP00000039865/1-756 EKIRNIGISA HIDSGKTTLT ERVLYYTGRI AKMHEVKGKD GVGAVMDSME BACU000453/1-711 EKIRNIGISA HIDSGKTTLT ERVLYYTGRI AKMHEVKGKD GVGAVMDSME bmy_18512T0/1-510 EKIRNIGISA HIDSGKTTLT ERVLYYTGRI AKMHEVKGKD GVGAVMDSME ENSTTRP00000001639/1-755 EKIRNIGISA HIDSGKTTLT ERVLYYTGRI AKMHEVKGKD GVGAVMDSME 101 150 ENSP00000419038/1-751 LERQRGITIQ SAATYTMWKD VNINIIDTPG HVDFTIEVER ALRVLDGAVL ENSBTAP00000039865/1-756 LERQRGITIQ SAATYTMWKD VNINIIDTPG HVDFTIEVER ALRVLDGAVL BACU000453/1-711 LERQRGITIQ SAATYTMWKD VNINIIDTPG HVDFTIEVER ALRVLDGGIL bmy_18512T0/1-510 LERQRGITIQ SAATYTMWKD VNINIIDTPG HVDFTIEVER ALRVLDGAIL ENSTTRP00000001639/1-755 LERQRGITIQ SAATYTMWKD VNINIIDTPG HVDFTIEVER ALRVLDGAIL 151 200 ENSP00000419038/1-751 VLCAVGGVQC QTMTVNRQMK RYNVPFLTFI NKLDRMGSNP ARALQQMRSK ENSBTAP00000039865/1-756 VLCAVGGVQC QTMTVNRQMR RYNVPFLTFI NKLDRVGSNP ARALQQMRSK BACU000453/1-711 VLCAVGGVQC QTMTVNRQMK RYSVPFLTFI NKLDRMGSSP ARALQQMRSK bmy_18512T0/1-510 VLCAVGGVQC QTMTVNRQMK RYSVPFLTFI NKLDRMGSNP ARALQQMRSK ENSTTRP00000001639/1-755 VLCAVGGVQC QTMTVNRQMK RYSVPFLTFI NKLDRMGSNP ARALQQMRSK 201 250 ENSP00000419038/1-751 LNHNAAFMQI PMGLEGNFKG IVDLIEERAI YFDGDFGQIV RYGEIPAELR ENSBTAP00000039865/1-756 LSHNAAFVQL PIGLESDFKG IIDLIEERAI YFDGDFGQIV RYGEIPAEFR BACU000453/1-711 LSHNAAFVQL PIGLEGDFKG IIDLIEERAI YFDGDFGQVV RYGEIPAEFR bmy_18512T0/1-510 LSHNAAFVQL PIGLEGDFKG IIDLIEERAI YFDGDFGQVV RYGEIPAEFR ENSTTRP00000001639/1-755 LSHNAAFVQL PIGLEGDFKG IIDLIEERAI YFDGDFGQVV RYGEIPAEFR 251 300 ENSP00000419038/1-751 AAATDHRQEL IECVANSDEQ LGEMFLEEK- ---------- ---IPSISDL ENSBTAP00000039865/1-756 AAAADHRQEL IECVANSDEQ LGEMFLEEK- ---------- ---TPSISDL BACU000453/1-711 AAAADHRQEL IECVANSDEQ LGTVERQRFS ---------- ---SVNVILI bmy_18512T0/1-510 AAAADHRQEL IECVANSDEQ LGEIYREPDS SLHQSQYSKE YQFISFICRF ENSTTRP00000001639/1-755 AAAADHRQEL IECVANSDEQ LGEMFLEEK- ---------- ---IPSISDL 301 350 ENSP00000419038/1-751 KLAIRRATLK RSFTPVFLGS ALKNKGVQPL LDAVLEYLPN PSEVQNYAIL ENSBTAP00000039865/1-756 KLAIRRATLN RSFTPVFLGS ALKNKGVQPL LDAVLEYLPN PSEVQNYAIL BACU000453/1-711 KLAIRRATLN RSFTPVFLGS ALKNKGVQPL LDAVLEYLPN PSEVQNYAIL bmy_18512T0/1-510 -LAIRRATLS RSFTPVFLGS ALKNKGVQPL LDAVLEYLPN PSEVQNYAIL ENSTTRP00000001639/1-755 KLAIRRATLN RSFTPVFLGS ALKNKGVQPL LDAVLEYLPN PSEVQNYAIL 351 400 ENSP00000419038/1-751 NKEDDSKEKT KILMNSSRDN SHPFVGLAFK LEVGRFGQLT YVRSYQGELK ENSBTAP00000039865/1-756 N-QDDSQEKT KILMNPKRDS SHPFVGLAFK LEAGRFGQLT YVRNYQGELK BACU000453/1-711 N-QDDSQEKT KILMNPKRDN SHPFVGLAFK LE-------- ---------- bmy_18512T0/1-510 N-QDDSQEKT KILMNPKRDN SHPFVGLAFK LEAGRFGQLT YVRNYQGQLK ENSTTRP00000001639/1-755 N-QDDSQEKT KILMNPKRDN SHPFVGLAFK LEAGRFGQLT YVRNYQGQLK 401 450 ENSP00000419038/1-751 KGDTIYNTRT RKKVRLQRLA RMHADMMEDV EEVYAGDICA LFGIDCASGD ENSBTAP00000039865/1-756 KGDNIYNTRT RKKVRVQRLV RMHADMMEDV EEVFAGDICA LFGIDCASGD BACU000453/1-711 ---------- ---------- --------DI EEVFAGDICA LFGIDCASGD bmy_18512T0/1-510 KGDTIYNTRT RKKVRVQRL- --------DI EEVFAGDICA LFGIDCASGD ENSTTRP00000001639/1-755 KGDTIYNTRT RKKVRVQRLV HMHADMMEDI EEVFAGDICA LFGIDCASGD 451 500 ENSP00000419038/1-751 TFTDKANSGL SMESIHVPDP VISIAMKPSN KNDLEKFSKG IGRFTREDPT ENSBTAP00000039865/1-756 TFTNKDNSGL SMESIHVPDP VISIAMKPSN KNDLEKFSKG IGRFTREDPT BACU000453/1-711 TFTNKDNSGL SMESIHVPDP VISIAMKPSN KNDLEKFSKG IGRFTREDPT bmy_18512T0/1-510 TFTNKDNSGL SMESIHVPDP VISIAMKPSN KNDLEKFSKG IGRFTREDPT ENSTTRP00000001639/1-755 TFTNKDNSGL SMESIHVPDP VISIAMKPSN KNDL-KFSKG IGRFTREDPT 501 550 ENSP00000419038/1-751 FKVYFDTENK ETVISGMGEL HLEIYAQRLE REYGCPCITG KPKVAFRETI ENSBTAP00000039865/1-756 FKVHFDTDSK ETIVSGMGEL HLEIYAQRME REYGCPCITG KPKVAFRETI BACU000453/1-711 FKVHFDTESK ETIVSGMGEL HLEIYAQRME REYGCPCTTG KPKVAFRETI bmy_18512T0/1-510 FKVHFDTESK ETIVSGMGEL HLEIYAQRME REYGCPCTTG KPKVAFRETI ENSTTRP00000001639/1-755 FKVHFDTESK ETIVSGMGEL HLEIYAQRME REYGCPCITG KPKV-FRETI 551 600 ENSP00000419038/1-751 TAPVPFDFTH KKQSGGAGQY GKVIGVLEPL DPEDYTKLEF SDETFGSNIP ENSBTAP00000039865/1-756 TAPVPFDFTH KKQSGGAGQF GKVIGVLEPL DPENYTKLEF SDETFGSNVP BACU000453/1-711 TAPVPFEFTH KKQSGGAGQF GKVIGVLEPL DPENYTKLEF SDETFGSNVP bmy_18512T0/1-510 TAPVP----- ---------- ---------- ---------- ---------- ENSTTRP00000001639/1-755 TAPVPFEFTH KKQSGGAGQF GKVIGVLEPL DPENYTKLEF SDETFGSNVP 601 650 ENSP00000419038/1-751 KQFVPAVEKG FLDACEKGPL SGHKLSGLRF VLQDGAHHMV DSNEISFIRA ENSBTAP00000039865/1-756 KQFVPAVEKG FLDACEKGPL SGHKLSGLRF VLQDGAHHMV DSNEISFIRA BACU000453/1-711 KQFVPAVEKG FLDACEKGPL SGHKLSGLRF VLQDGAYHMV DSNEISFIRA bmy_18512T0/1-510 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001639/1-755 KQFVPAVEKG FLDACEKGPL SGHKLSGLRF VLQDGAYHMV DSNEISFIRA 651 700 ENSP00000419038/1-751 GEGALKQALA NATLCILEPI MAVEVVAPNE FQGQVIAGIN RRHGVITGQD ENSBTAP00000039865/1-756 GEGALKQALA NTALCILEPI MSVEVIAPNE FQGPVIAGIN RRHGVITGQD BACU000453/1-711 GEGALKQALA NATLCILEPI MSVEVVAPNE FQGPVIAGIN RRHGIITGQD bmy_18512T0/1-510 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001639/1-755 GEGALKQALA NATLCILEPI MSVEVVAPNE FQGPVIAGIN RRHGIITGQD 701 750 ENSP00000419038/1-751 GVEDYFTLYA DVPLNDMFGY STELRSCTE- --GKGEYTME YSRYQPCLPS ENSBTAP00000039865/1-756 GIEDYFTLYA DVPLNNMFGY STELRSCTEN PQGKGEYTME YCRYQPCSPA BACU000453/1-711 GIEDYFTLYA DVPLNEMFGY STELRSCTE- --GKGEYTME YCRYQPCSPA bmy_18512T0/1-510 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001639/1-755 GIEDYFTLYA DVPLNEMFGY STELRSCTE- --GKGEYTME YCRYQPCLPA 751 800 ENSP00000419038/1-751 TQEDVINKYL EATGQLPVKK GKAKN ENSBTAP00000039865/1-756 TQEELINKYL EATGQLPVKK GKAKN BACU000453/1-711 TQEDLINKYL EATGQLPVKK GNAKN bmy_18512T0/1-510 ---------- ---------- ----- ENSTTRP00000001639/1-755 TQEDLINKYL EATGQLPVKK GNAKN