KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:49:55 2014  Check: 00 ..

 Name: ENSTTRP00000004189/1-108  Len:    114  Check:  5083  Weight:  1.00
 Name: ENSP00000354223/1-109     Len:    114  Check:  9519  Weight:  1.00
 Name: bmy_22414T0/1-114         Len:    114  Check:  953  Weight:  1.00
 Name: ENSBTAP00000039979/1-109  Len:    114  Check:  9332  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000004189/1-108  MAGALVRKAA DYVRSKDFRD YLM------R HFWGPVANWG LPIAAINDMK 
ENSP00000354223/1-109     MAGALVRKAA DYVRSKDFRD YLM-----ST HFWGPVANWG LPIAAINDMK 
bmy_22414T0/1-114         MAGALVRKAA DYVRSKDFRD YLMRQVSVSQ HFWGPVANWG LPIAAINDMK 
ENSBTAP00000039979/1-109  MAGALVRKAA DYVRSKDFRD YLM-----ST HFWGPVANWG LPIAAINDMK 


                          51                                                 100
ENSTTRP00000004189/1-108  KSPEIISGRM TFALCCYSLA FMRFAYKVQP RNWLLFACHA TNEVAQLTQG 
ENSP00000354223/1-109     KSPEIISGRM TFALCCYSLT FMRFAYKVQP RNWLLFACHA TNEVAQLIQG 
bmy_22414T0/1-114         KSPEIISGRM TFALCCYSLT FMRFAYKVQP RNWLLFACHA TNEVAQLIQG 
ENSBTAP00000039979/1-109  KSPEIISGRM TFALCCYSLT FMRFAYKVQP RNWLLFACHA TNEVAQLIQG 


                          101                                                150
ENSTTRP00000004189/1-108  GRLLRHEMSK NASA 
ENSP00000354223/1-109     GRLIKHEMTK TASA 
bmy_22414T0/1-114         GRLLRHEMSK KASA 
ENSBTAP00000039979/1-109  GRLIRHEMSK KASA