KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:00 2014 Check: 00 .. Name: ENSP00000361027/1-1084 Len: 1196 Check: 1565 Weight: 1.00 Name: ENSBTAP00000040024/1-1079 Len: 1196 Check: 4594 Weight: 1.00 Name: bmy_18527T0/1-630 Len: 1196 Check: 6743 Weight: 1.00 Name: ENSTTRP00000002910/1-998 Len: 1196 Check: 6504 Weight: 1.00 Name: BACU010334/1-957 Len: 1196 Check: 3323 Weight: 1.00 // 1 50 ENSP00000361027/1-1084 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040024/1-1079 ---------- ---------- ---------- ---------- ---------- bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 ---------- ---------- ---------- ---------- ---------- BACU010334/1-957 MLVEHDCERL HPAVLVLVTV VIAFVVTYHS KSEWKQLLLG AVRLEQSNPE 51 100 ENSP00000361027/1-1084 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040024/1-1079 ---------- ---------- ---------- ---------- ---------- bmy_18527T0/1-630 ---------- ---------- ------MDSA THIKGKHTGG QGQPRCPISL ENSTTRP00000002910/1-998 ---------- ---------- ---------- ---------- ---------- BACU010334/1-957 HFHPLETGRP PEHSRWRVRF LFVLVEMDSA THVKGKHTGG QGQPRCPISL 101 150 ENSP00000361027/1-1084 ---------- MRNSEEQPSG GTTVLQRLLQ EQLRYGNPSE NRSLLAIHQQ ENSBTAP00000040024/1-1079 ---------- MRNSDEQPSG GTTVLQRLLQ EQLRYGNPNE NRNLLAIHQQ bmy_18527T0/1-630 SLHKAPPAIE MRNSEEQPSG GTTVLQRLLQ EQLRYGNPNE NRNLLAIHQQ ENSTTRP00000002910/1-998 ---------- MRNSEEQPSG GTTVLQRLLQ EQLRYGNPNE NRNLLAIHQQ BACU010334/1-957 SLHKAPPAIE MRNSEEQPSG GTTVLQRLLQ EQLRYGNPNE NRNLLAIHQQ 151 200 ENSP00000361027/1-1084 ATGNGPPFPS GSGNPGPQSD VLSPQDHHQQ LVAHAARQEP QGQEIQSENL ENSBTAP00000040024/1-1079 ATGNGPPFPS GSGNPGPQND VLSPQDHHQQ LVAHAARQEP QGQEIQSENI bmy_18527T0/1-630 ATGNGPPFPS GSGNPGPQND VLSPQDHHQQ LVAHAARQEP QGQEIQSENI ENSTTRP00000002910/1-998 ATGNGPPFPS GSGNPGPQND VLSPQDHHQQ LVAHAARQEP QGQEIQSENI BACU010334/1-957 ATGNGPPFPS GSGNPGPQND VLSPQDHHQQ LVAHAARQEP QGQEIQSENL 201 250 ENSP00000361027/1-1084 IMEKQLSPRM QNNEELPTYE EAKVQSQYFR GQQHASVGAA FYVTGVTNQK ENSBTAP00000040024/1-1079 IMEKQLSPRM QNNEELPTYE EAKVQSQYFR GQQHASVGAA FYVTGVTNQK bmy_18527T0/1-630 IMEKQLSPRM QNNEELPTYE EAKVQSQYFR GQQHASVGAA FYVTGVTNQK ENSTTRP00000002910/1-998 IMEKQLSPRM QNNEELPTYE EAKVQSQYFR GQQHASVGAA FYVTGVTNQK BACU010334/1-957 IMEKQLSPRM QNNEELPTYE EAKVQSQYFR GQQHASVGAA FYVTGVTNQK 251 300 ENSP00000361027/1-1084 MRTEGRPSVQ RLNPGKMHQD EGLRDLKQGH VRSLSERLMQ MSLATSGVKA ENSBTAP00000040024/1-1079 MRTEGRPSVQ RLNPGKMHQD EGLRDLKQGH VRSLSERLMQ MSLATSGVKA bmy_18527T0/1-630 MRTEGRPSVQ RLNPGKMHQD EGLRDLKQGH VRSLSERLMQ MSLATSGVKA ENSTTRP00000002910/1-998 MRTEGRPSVQ RLNPGKMHQD EGLRDLKQGH VRSLSERLMQ MSLATSGVKA BACU010334/1-957 MRTEGRPSVQ RLNPGKMHQD EGLRDLKQGH VRSLSERLMQ MSLATSGVKA 301 350 ENSP00000361027/1-1084 HPPVTSAPLS PPQPNDLYKN PTSSSEFYKA QGPLPNQHSL KGMEHRGPPP ENSBTAP00000040024/1-1079 HPPVTSAPLS PPQPNDLYKN PTSSSDFYKA QGPPPSQHSL KGMEHRGPPP bmy_18527T0/1-630 HPPVTSAPLS PPQPNDLYKN PTSSSEFYKA QGPPPSQHSL KGMEHRGPPP ENSTTRP00000002910/1-998 HPPVTSAPLS PPQPNDLYKN PTSSSEFYKA QGPPPSQHSL KGMEHRGPPP BACU010334/1-957 HPPVTSAPLS PPQPNDLYKN PTSSSEFYKA QGPPPSQHSL KGMEHRGPPP 351 400 ENSP00000361027/1-1084 EYPFKGMPPQ SVVCKPQEPG HFYSEHRLNQ PGRTEGQLMR YQHPPEYGAA ENSBTAP00000040024/1-1079 EYPFKGMPPQ SIVCKPQEPG HYYSEHRLNQ PGRTEGQLMR YQHPPEYGAA bmy_18527T0/1-630 EYPFKGMPPQ SVVCKPQEPG HFYSEHRLNQ PGRTEGQLMR YQHPPEYGAA ENSTTRP00000002910/1-998 EYPFKGMPPQ SVVCKPQEAG HFYSEHRLNQ PGRTEGQLMR YQHPPEYGAA BACU010334/1-957 EYPFKGMPPQ SVVCKPQEPG HVYSEHRLNQ PGRTEGQLMR YQHPPEYGAA 401 450 ENSP00000361027/1-1084 RPAQDISLPL SARNSQPHSP TSSLTSGGSL PLLQSPPSTR LSPARHPLVP ENSBTAP00000040024/1-1079 RPTQDISLPL SARNSQPHSP TSSLTSGGSL PLLQSPPSTR LSPAQHPLVP bmy_18527T0/1-630 RPTQDISLPL SARNSQPHSP TSSLTSGGSL PLLQSPPSTR LSPAQHPLVP ENSTTRP00000002910/1-998 RPAQDISLPL SARNSQPHSP TSSLTSGGSL PLLQSPPSTR LSPAQHPLVP BACU010334/1-957 RPTQDISLPL SARNSQPHSP TSSLTSGGSL PLLQSPPSTR LSPAQHPLVP 451 500 ENSP00000361027/1-1084 NQGDHSAHLP RPQQHFLPNQ AHQGDHYRLS QPGLSQQQQQ QQQQHHHHHH ENSBTAP00000040024/1-1079 NQGDHSAHLP RPQQHFLPNQ AHQGDHYRLP QPGLSQQQPQ -QPQPHHHHH bmy_18527T0/1-630 NQGDHSAHLP RPQQHFLANQ AHQGDHYRLP QPGLSQQQPQ PPPPPHHHHH ENSTTRP00000002910/1-998 NQGDHSAHLP RPQQHFLANQ AHQGDHYRLP QPGLSQQQPQ PPPPPHHHHH BACU010334/1-957 NQGDHSAHLP RPQQHFLANQ AHQGDHYRLP QPGLSQ---Q PPPPPHHHHH 501 550 ENSP00000361027/1-1084 HQQQQQQQPQ QQPGEAYSAM PRAQPSSASY QPVPADPFAI VSRAQQMVEI ENSBTAP00000040024/1-1079 H---QQ---Q QQPGEGYSAM PRAQQSSASY QPMPADPFAI VSRAQQMVEI bmy_18527T0/1-630 H--QQQ---Q QQPGEAYSAM PRAQQSSASY QPMPADPFAI VSRAQQMVEI ENSTTRP00000002910/1-998 HQQQQQ---Q QQPGEAYSAM PRAQQSSASY QPMPADPFAI VSRAQQMVEI BACU010334/1-957 H---QQ---Q QQPGEAYSAM PRAQQSSASY QPMPADPFAI VSRAQQMVEI 551 600 ENSP00000361027/1-1084 LSDENRNLRQ ELEGCYEKVA RLQKVETEIQ RVSEAYENLV KSSSKREALE ENSBTAP00000040024/1-1079 LSDENRNLRQ ELEGCYEKVA RLQKVETEIQ RVSEAYENLV KSSSKREALE bmy_18527T0/1-630 LSDENRNLRQ ELEGCYEKVA RLQKVETEIQ RVSEAYENLV KSSSKREALE ENSTTRP00000002910/1-998 LSDENRNLRQ ELEGCYEKVA RLQKVETEIQ RVSEAYENLV KSSSKREALE BACU010334/1-957 LSDENRNLRQ ELEGCYEKVA RLQKVETEIQ RVSEAYENLV KSSSKREALE 601 650 ENSP00000361027/1-1084 KAMRNKLEGE IRRMHDFNRD LRERLETANK QLAEKEYEGS EDTRKTISQL ENSBTAP00000040024/1-1079 KAMRNKLEGE IRRMHDFNRD LRERLETANK QLAEKEYEGS EDTRKTISQL bmy_18527T0/1-630 KAMRNKLEGE IRRMHDFNRD LRERLETANK QLAEKEYEGS EDTRKTISQL ENSTTRP00000002910/1-998 KAMRNKLEGE IRRMHDFNRD LRERLETANK QLAEKEYEGS EDTRKTISQL BACU010334/1-957 KAMRNKLEGE IRRMHDFNRD LRERLETANK QLAEKEYEGS EDTRKTISQL 651 700 ENSP00000361027/1-1084 FAKNKESQRE KEKLEAELAT ARSTNEDQRR HIEIRDQALS NAQAKVVKLE ENSBTAP00000040024/1-1079 FAKNKESQRE KEKLEAELAT ARSTNEDQRR HIEIRDQALS NAQAKVVKLE bmy_18527T0/1-630 FAKNKESQRE KEKLEAELAT ARSTNEDQRR HIEIRDQALS NAQAKVVKLE ENSTTRP00000002910/1-998 FAKNKESQRE KEKLEAELAT ARSTNEDQRR HIEIRDQALS NAQAKVVKLE BACU010334/1-957 FAKNKESQRE KEKLEAELAT ARSTNEDQRR HIEIRDQALS NAQAKVVKLE 701 750 ENSP00000361027/1-1084 EELKKKQVYV DKVEKMQQAL VQLQAACEKR EQLEHRLRTR LERELESLRI ENSBTAP00000040024/1-1079 EELKKKQVYV DKVEKMQQAL VQLQAACEKR EQLEHRLRTR LERELESLRI bmy_18527T0/1-630 EEV------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 EELKKKQVYV DKVEKMQQAL VQLQAACEKR EQLEHRLRTR LERELESLRI BACU010334/1-957 EELKKKQVYV DKVEKMQQAL VQLQAACEKR EQLEHRLRTR LERELESLRI 751 800 ENSP00000361027/1-1084 QQRQGNCQPT NVSEYNAAAL MELLREKEER ILALEADMTK WEQKYLEENV ENSBTAP00000040024/1-1079 QQRQGNSQPT NVSEYNAAAL MEILREKEER ILALEADMTK WEQKYLEENV bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 QQRQGNSQPT NVSEYNAAAL MELLREKEER ILALEADMTK WEQKYLEENV BACU010334/1-957 QQRQGNSQPT NVSEYNAAAL MELLREKEER ILALEADMTK WEQKYLEENV 801 850 ENSP00000361027/1-1084 MRHFALDAAA TVAAQRDTTV ISHSPNTSYD TALEARIQKE EEEILMANKR ENSBTAP00000040024/1-1079 MRHFALDAAA TVAAQRDTTV ISHSPNTSYD TALEARIQKE EEEILMANKR bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 MRHFALDAAA TVAAQRDTTV ISHSPNTSYD TALEARIQKE EEEILMANKR BACU010334/1-957 MRHFALDAAA TVAAQRDTTV ISHSPNTSYD TALEARIQKE EEEILMANKR 851 900 ENSP00000361027/1-1084 CLDMEGRIKT LHAQIIEKDA MIKVLQQRSR KEPSKTEQLS CMRPAKSLMS ENSBTAP00000040024/1-1079 CLDMEGRIKT LHAQIIEKDA MIKVLQQRSR KEPSKTEQLS SMRPAKSLMS bmy_18527T0/1-630 CVVSSGSV-- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 CLDMEGRIKT LHAQIIEKDA MIKVLQQRSR KEPSKTEQLS SMRPAKSLMS BACU010334/1-957 CLDMEGRIKT LHAQIIEKDA MIKVLQQRSR KEPSKTEQLS SMRPAKSLMS 901 950 ENSP00000361027/1-1084 ISNAGSGLLS HSSTLTGSPI MEEKRDDKSW KGSLGILLGG DYRAEYVPST ENSBTAP00000040024/1-1079 ISNAGSGLLS HSSTLTGTPI MEEKRDDKSW KGSLGILLAG DYRAESVPST bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 ISNAGSGLLS HSSTLTGTPI MEEKRDDKSW KGSLGILLGG DYRAESVPST BACU010334/1-957 ISNAGSGLLS HSSTLTGTPI MEEKRDDKSW KGSL------ ---------- 951 1000 ENSP00000361027/1-1084 PSPVPPSTPL LSAHSKTGSR DCSTQTERGT ESNKTAAVAP ISVPAPVAAA ENSBTAP00000040024/1-1079 PSPVPPSTPL LSAHSKTGSR DCSTQTERGV ESNKTNVVAP ISVPAPVAAA bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 PSPVPPSTPL LSAHSKTGSR DCSTQTERGT EPNKTAAVAP ISVPAPVAAA BACU010334/1-957 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000361027/1-1084 ATAAAITATA ATITTTMVAA APVAVAAAAA PAAAAA--PS PATAAATAAA ENSBTAP00000040024/1-1079 AAAATITAAA ATNTTTMVAA APVAVAAATA PATAAATTPS PATAAATLAA bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 ATAAAITATA ATNTTTMVAA APVAVAAAAP AAAATAAAPS PATAAAALAA BACU010334/1-957 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000361027/1-1084 VSPAAAGQIP AAASVASAAA VAPSAAAAAA VQVAPAAPAP VPAPALVPVP ENSBTAP00000040024/1-1079 AVSPAATAAP VPATASAVTA TVVAPVAATA IQVAPAVPAP VPAPAPTPVP bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 AVSPAAAAAQ IPAAASAVAA AVVAPAAAAA VQLAPAAPAP VPAPAPTPVP BACU010334/1-957 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000361027/1-1084 APAAAQASAP AQTQAPTSAP AVAPTPAPTP TPAVAQAEVP ASPATGPGPH ENSBTAP00000040024/1-1079 APVAAQASAP AQTQAPTPAP AAAAPPAPTP APALAQSEAP ASPATGSGPR bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002910/1-998 ASAAAQASAP A--------- ---------- ---------- ---------- BACU010334/1-957 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000361027/1-1084 RLSIPSLTCN PDKTDGPVFH SNTLERKTPI QILGQEPDAE MVEYLI ENSBTAP00000040024/1-1079 RLSTPSLSCN PDKPDGSVFH SNTLERKTPI QILGQEPDTE MVEYLI bmy_18527T0/1-630 ---------- ---------- ---------- ---------- ------ ENSTTRP00000002910/1-998 ---------- ---------- ---------- ---------- ------ BACU010334/1-957 ---------- ----DGPVFH SSTLERKAPI QILGQEPDAE MVEYLI