KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:01 2014 Check: 00 .. Name: ENSTTRP00000009259/1-553 Len: 553 Check: 6841 Weight: 1.00 Name: ENSP00000373343/1-553 Len: 553 Check: 5297 Weight: 1.00 Name: BACU015159/1-505 Len: 553 Check: 2789 Weight: 1.00 Name: bmy_00451T0/1-475 Len: 553 Check: 3877 Weight: 1.00 Name: ENSBTAP00000040049/1-517 Len: 553 Check: 8286 Weight: 1.00 // 1 50 ENSTTRP00000009259/1-553 MSLSGASERS VPATKIEITV SCRXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373343/1-553 MSLGGASERS VPATKIEITV SCRNLLDLDT FSKSDPMVVL YTQSRASQEW BACU015159/1-505 MSLSGASERS VPATKIEITV SCRNLLDLDT FSKSDPMVVL YTQSRASQEW bmy_00451T0/1-475 MSLSGASERS VPATKIEITV SCRNLLDLDT FSKSDPMVVL YMQSRASQEW ENSBTAP00000040049/1-517 MSFSGASERS VPATKIEITV SCRNLLDLDT FSKSDPMVVL YTQSRASQEW 51 100 ENSTTRP00000009259/1-553 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXYNV DSRTNISKPK ENSP00000373343/1-553 REFGRTEVID NTLNPDFVRK FVLDYFFEEK QNLRFDVYNV DSKTNISKPK BACU015159/1-505 RGFGRTEVID NTLNPDFVRK FVLDYFFEEK QNLRFDVYNV DSRTNISKP- bmy_00451T0/1-475 REFGRTEVID NTLNPDFVRK FVLDYFFEEK QNLRFDVYNV DSRTNISKP- ENSBTAP00000040049/1-517 REFGRTEVID NTLNPDFVRK FVLDYFFEEK QNLRFDVYNV DSKTNISKP- 101 150 ENSTTRP00000009259/1-553 DFLGQAFLAL GEVIGGQGSR VERPLTGVPG KKCGTILLTA EELSNCRDIA ENSP00000373343/1-553 DFLGQAFLAL GEVIGGQGSR VERTLTGVPG KKCGTILLTA EELSNCRDIA BACU015159/1-505 ---------- ---------- ---------- ---------- -------DIA bmy_00451T0/1-475 DFLGQAFLAL GEVIGGQGSR VERPLTGVPG KKCGTILLTA EELSNCRDIA ENSBTAP00000040049/1-517 DFLGQAFLAL GEVIGGQGSR VERPLTGVPG KKCGTILLTA EELSNCRDIA 151 200 ENSTTRP00000009259/1-553 TMQLCANKLD KKDFFGKSDP FLVFYRSNED GTFTICHKTE VVKNTLNPVW ENSP00000373343/1-553 TMQLCANKLD KKDFFGKSDP FLVFYRSNED GTFTICHKTE VVKNTLNPVW BACU015159/1-505 TMQLCANKLD KKDFFGKSDP FLVFYRSNED GTFTICHKTE VVKNTLNPVW bmy_00451T0/1-475 TMQLCANKLD KKDFFGKSDP FLVFYRSNED GTFTICHKTE VVKNTLNPVW ENSBTAP00000040049/1-517 TMQLCANKLD KKDFFGKSDP FLVFYRSNED GT-------- ---------- 201 250 ENSTTRP00000009259/1-553 QPFSIPVRVL CNGDYDRTVK IDVYDWDRDG SHDFIGEFTT SYRELSKAQN ENSP00000373343/1-553 QPFSIPVRAL CNGDYDRTVK IDVYDWDRDG SHDFIGEFTT SYRELSKAQN BACU015159/1-505 QPFSIPVRVL CNGDYDRTVK IDVYDWDRDG SHDFIGEFTT SYRELSKAQN bmy_00451T0/1-475 QPFSIPVRVL CNGDYDRTVK IDVYDWDRDG SHDFIGEFTT SYRELSKAQN ENSBTAP00000040049/1-517 ---------- -------TVK IDVYDWDRDG SHDFIGEFTT SYRELSKAQN 251 300 ENSTTRP00000009259/1-553 QFTVYEVLNP RKKCKKKKYV NSGTVTLLSF SVDSEFTFVD YIKGGTQLNF ENSP00000373343/1-553 QFTVYEVLNP RKKCKKKKYV NSGTVTLLSF SVDSEFTFVD YIKGGTQLNF BACU015159/1-505 QFTVYEVLNP RKKCKKKKYV NSGTVTLLSF SVDSEFTFVD YIKGGTQLNF bmy_00451T0/1-475 QFTVYEVLNP RKKCKKKKYV NSGTVTLLSF SVDSEFTFVD YIKGGTQLNF ENSBTAP00000040049/1-517 QFTVYEVLNP RKKCKKKKYV NSGTVTLLSF SVDSEFTFVD YIKGGTQLNF 301 350 ENSTTRP00000009259/1-553 TVAIDFTASN GNPLQPTSLH YMSPYQLSAY AMALKAVGEI IQDYDSDKLF ENSP00000373343/1-553 TVAIDFTASN GNPLQPTSLH YMSPYQLSAY AMALKAVGEI IQDYDSDKLF BACU015159/1-505 TVAIDFTASN GNPLQPTSLH YMSPYQLSAY AMALKAVGEI IQDYDSDKLF bmy_00451T0/1-475 TVAIDFTASN GNPLQPTSLH YMSPYQLSAY AMALKAVGEI IQDYDSDKLF ENSBTAP00000040049/1-517 TVAIDFTASN GNPLQPTSLH YMSPYQLSAY AMALKAVGEI IQDYDSDKLF 351 400 ENSTTRP00000009259/1-553 PAYGFGAKLP PEGRISHQFP LNNNDEDPNC VGIEGVLESY FQSLRTVQLY ENSP00000373343/1-553 PAYGFGAKLP PEGRISHQFP LNNNDEDPNC AGIEGVLESY FQSLRTVQLY BACU015159/1-505 PAYGFGAKLP PEGRISHQFP LNNNDEDPNC AGIEGVLESY FQSLRTVQLY bmy_00451T0/1-475 PAYGFGAKLP PEGRISHQFP L--------- ---------- ---------- ENSBTAP00000040049/1-517 PAYGFGAKLP PEGRISHQFP LNNNDEDPNC VGIEGVLESY FQSLRTVQLY 401 450 ENSTTRP00000009259/1-553 GPTYFAPVIN LVARAAAKIS DGSQYYVLLI ITDGVISDMT QTKEAIVSAS ENSP00000373343/1-553 GPTYFAPVIN QVARAAAKIS DGSQYYVLLI ITDGVISDMT QTKEAIVSAS BACU015159/1-505 GPTYFAPVIN QVARAAAKIS DGSQYYVLLI ITDGVISDMT QTKEAIVSPS bmy_00451T0/1-475 ---------- ---------- ---------- ---------- --------AS ENSBTAP00000040049/1-517 GPTYFAPVIN QVARAAAKIS DGSQYYVLLI ITDGVISDMT QTKEAIVSAS 451 500 ENSTTRP00000009259/1-553 SLPMSIIIVG VGPAMFEAME ELDGDDVRVS SRGRYAERDI VQFVPFRDYV ENSP00000373343/1-553 SLPMSIIIVG VGPAMFEAME ELDGDDVRVS SRGRYAERDI VQFVPFRDYV BACU015159/1-505 SLPMSIIIVG VGPAMFEAME ELDGDDVRVS SRGRFAERDI VQFVPFRDYV bmy_00451T0/1-475 SLPMSIIIVG VGPAMFEAME ELDGDDVRVS SRGRYAERDI VQFVPFRDYV ENSBTAP00000040049/1-517 SLPMSIIIVG VGPAMFEAME ELDGDDVRVS SRGRYAERDI VQFVPFRDYV 501 550 ENSTTRP00000009259/1-553 DRSGNQVLSM ARLAKDVLAE IPEQLLSYMR TRDIQPRPPP PANPRPTPAP ENSP00000373343/1-553 DRSGNQVLSM ARLAKDVLAE IPEQLLSYMR TRDIQPRPPP PANPSPIPAP BACU015159/1-505 DRSGNQVLSM ARLAKDVLAE IPEQLLSYMR TRDIQPRPPP PANPSPMPAP bmy_00451T0/1-475 DRSGNQVLSM ARLAKDVLAE IPEQLLSYMR TRDIQPRPPP PANPSPTPAP ENSBTAP00000040049/1-517 DRSGNQVLSM ARLAKDVLAE IPEQLLSYMR TRDIQPRPPP PATTSPTPAP 551 600 ENSTTRP00000009259/1-553 EHP ENSP00000373343/1-553 EQP BACU015159/1-505 EHP bmy_00451T0/1-475 EHP ENSBTAP00000040049/1-517 EHP