KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:02 2014 Check: 00 .. Name: ENSTTRP00000006031/1-567 Len: 568 Check: 3238 Weight: 1.00 Name: ENSBTAP00000040061/1-568 Len: 568 Check: 1418 Weight: 1.00 Name: bmy_09446T0/1-301 Len: 568 Check: 8207 Weight: 1.00 Name: BACU009781/1-568 Len: 568 Check: 3204 Weight: 1.00 // 1 50 ENSTTRP00000006031/1-567 MGGIMAPKDI MTNTHAKSIL NSMNSLRKSN TLCDVTLRVE QKDFPAHRIV ENSBTAP00000040061/1-568 MRGIMAPKDI MTNTHAKSIL NSMNSLRKSN TLCDVTLRVE QKDFPAHRIV bmy_09446T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU009781/1-568 MGGIMAPKDI MTNTHAKSIL NSMNSLRKSN TLCDVTLRVE QKDFPAHRIV 51 100 ENSTTRP00000006031/1-567 LAACSDYFCA MFTSELSEKG KPYVDIQGLT ASTMEILLDF VYTETVHVTV ENSBTAP00000040061/1-568 LAACSDYFCA MFTSELSEKG KPYVDIQGLT ASTMEILLDF VYTETVHVTV bmy_09446T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU009781/1-568 LAACSDYFCA MFTSELSEKG KPYVDIQGLT ASTMEILLDF VYTETVHVTV 101 150 ENSTTRP00000006031/1-567 ENVQELLPAA CLLQLKGVKQ ACCEFLESQL DPSNCLGIRD FAETHNCVDL ENSBTAP00000040061/1-568 ENVQELLPAA CLLQLKGVKQ ACCEFLESQL DPSNCLGIRD FAETHNCVDL bmy_09446T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU009781/1-568 ENVQELLPAA CLLQLKGVKQ ACCEFLESQL DPSNCLGIRD FAETHNCVDL 151 200 ENSTTRP00000006031/1-567 MQAAEVFSQK HFPEVVQHEE FILLSQGEVE KLIKCDEIQV DSEEPVFEAV ENSBTAP00000040061/1-568 MQAAEVFSQK HFPEVVQHEE FILLSQGEVE KLIKCDEIQV DSEEPVFEAV bmy_09446T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU009781/1-568 MQAAEVFSQK HFPEVVQHEE FILLSQGEVE KLIKCDEIQV DSEEPVFEAV 201 250 ENSTTRP00000006031/1-567 INWVKHAREG REESLPDLLQ YVRMPLLTPR YITDVIDAEX XXXXXXXXXX ENSBTAP00000040061/1-568 ISWVKHAKKE REGSLPDLLQ YVRMPLLTPR YITDVIDTEP FIRCSLQCRD bmy_09446T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU009781/1-568 INWVKHAKKE REESLPDLLQ YVRMPLLTPR YITDVIDAEP FIRCSLQCRD 251 300 ENSTTRP00000006031/1-567 XXXXXXXXXX XXXXXXXXXX XXXXXXXXAN EVLLVVGGFG SQQSPIDVVE ENSBTAP00000040061/1-568 LVDEAKKFHL RPELRTQMQG PRTRAHIRAN EVLLVVGGFG SQQSPIDVVE bmy_09446T0/1-301 ---------- -------MQG PRTRARLGAN EVLLVVGGFG SQQSPIDVVE BACU009781/1-568 LVDEAKKFHL RPELRSQMQG PRTRARLGAN EVLLVVGGFG SQQSPIDVVE 301 350 ENSTTRP00000006031/1-567 KYDPKTQEWS FLPSITRKRR YVASVSLHDR IYVIGGYDGR SRLSSVECLD ENSBTAP00000040061/1-568 KYDPKTQEWS FLPSITRKRR YVASVSLHDR IYVIGGYDGR SRLSSVECLD bmy_09446T0/1-301 KYDPKTQEWS FLPSITRKRR YVASVSLHDR IYVIGGYDGR SRLSSVECLD BACU009781/1-568 KYDPKTQEWS FLPSITRKRR YVASVSLHDR IYVIGGYDGR SRLSSVECLD 351 400 ENSTTRP00000006031/1-567 YTADEDGVWY SVAPMNVRRG LAGATTLGDM IYVSGGFDGS RRHTSMERYD ENSBTAP00000040061/1-568 YTADEDGVWY SVAPMNVRRG LAGATTLGDM IYVSGGFDGS RRHTSMERYD bmy_09446T0/1-301 YTADEDGVWY SVAPMNVRRG LAGATTLGDM IYVSGGFDGS RRHTSMERYD BACU009781/1-568 YTADEDGVWY SVAPMNVRRG LAGATTLGDM IYVSGGFDGS RRHTSMERYD 401 450 ENSTTRP00000006031/1-567 PNIDQWSMLG DMQTAREGAG LVVASGVIYC LGGYDGLNIL NSVEKYDPHT ENSBTAP00000040061/1-568 PNIDQWSMLG DMQTAREGAG LVVASGVIYC LGGYDGLNIL NSVEKYDPHT bmy_09446T0/1-301 PNIDQWSMLG DMQTAREGAG LVVASGVIYC LGGYDGLNIL NSVEKYDPHT BACU009781/1-568 PNIDQWSMLG DMQTAREGAG LVVASGVIYC LGGYDGLNIL NSVEKYDPHT 451 500 ENSTTRP00000006031/1-567 GHWTNVTPMA TKRSGAGVAL LNDHIYVVGG FDGTAHLSSV EAYNIRTDSW ENSBTAP00000040061/1-568 GHWANVTPMA TKRSGAGVAL LNDHIYVVGG FDGTAHLSSV EAYNIRTDSW bmy_09446T0/1-301 GHWTNVTPMA TKRSGAGVAL LNDHIYVVGG FDGTAHLSSV EAYNIRTDSW BACU009781/1-568 GHWTNVTPMA TKRSGAGVAL LNDHIYVVGG FDGTAHLSSV EAYNIRTDSW 501 550 ENSTTRP00000006031/1-567 TTVTSMTTPR CYVGATVLRG RLYAIAGYDG NSLLSSIECY DPIIDSWEVV ENSBTAP00000040061/1-568 TTVTSMTTPR CYVGATVLRG RLYAIAGYDG NSSLSSIECY DPIIDSYGLV bmy_09446T0/1-301 TTVTSMTTPR CYVGATVLRG RLYAIAGYDG NSLLSSIECY DPIIDSWEVV BACU009781/1-568 TTVTSMTTPR CYVGATVLRG RLYAIAGYDG NSLLSSIECY DPIIDSWEVV 551 600 ENSTTRP00000006031/1-567 TSMGTQRCDA GVCVLRE- ENSBTAP00000040061/1-568 TSMGTQRCDA GVCALREK bmy_09446T0/1-301 TSMGTQRCDA GVCVLREK BACU009781/1-568 TSMGTQRCDA GVCVLREK