KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:03 2014 Check: 00 .. Name: ENSTTRP00000000075/1-715 Len: 860 Check: 7089 Weight: 1.00 Name: ENSBTAP00000040066/1-821 Len: 860 Check: 280 Weight: 1.00 Name: ENSP00000359356/1-810 Len: 860 Check: 8933 Weight: 1.00 Name: bmy_20449T0/1-441 Len: 860 Check: 7811 Weight: 1.00 Name: BACU002813/1-814 Len: 860 Check: 330 Weight: 1.00 // 1 50 ENSTTRP00000000075/1-715 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040066/1-821 SFLGILPSTI RTPSSHSMVA TDKVAEKLSS TLSWVKNTVS HTVSQMASQV ENSP00000359356/1-810 MVTNKMTAAF RNPSGKQ-VA TDKVAEKLSS TLSWVKNTVS HTVSQMASQV bmy_20449T0/1-441 ---------- ---------- ---------- ---------- ---------- BACU002813/1-814 ---------- ---------- ---------- ---------- -----MASQV 51 100 ENSTTRP00000000075/1-715 ---------- ---------- ---------- ---------- -----LLETD ENSBTAP00000040066/1-821 ASPSASLHTT SSSTTLSTPA LSPSSPSQLS PDDLELLAKL EEQNRLLETD ENSP00000359356/1-810 ASPSTSLHTT SSSTTLSTPA LSPSSPSQLS PDDLELLAKL EEQNRLLETD bmy_20449T0/1-441 ---------- ---------- ---------- ---------- ---------- BACU002813/1-814 ASPSASLHTT SSSTTLSTPA LSPSSPSQLS PDDLELLAKL EEQNRLLETD 101 150 ENSTTRP00000000075/1-715 SKSLRSVNGS RRXXXXXXXX XXXXXXXXXX XEEDSWILWG RIVNEWEDVR ENSBTAP00000040066/1-821 SKSLRSVNGS RRNSGSSLVS SSSASSNLSH LEEDSWILWG RVVNEWEDVR ENSP00000359356/1-810 SKSLRSVNGS RRNSGSSLVS SSSASSNLSH LEEDSWILWG RIVNEWEDVR bmy_20449T0/1-441 ---------- ---------- ---------- ---------- ---------- BACU002813/1-814 SKSLRSVNGS RRNSGSSLVS SSSASSNLSH LEEDSWILWG RIVNEWEDVH 151 200 ENSTTRP00000000075/1-715 KKKEKQVKEL VRKGIPHHFR AIVWQLLCSA QSMPIKDQYS ELLKMTSPCE ENSBTAP00000040066/1-821 KKKEKQVKEL VRKGIPHHFR AIVWQLLCSA QSMPIKDQYS ELLKMTSPCE ENSP00000359356/1-810 KKKEKQVKEL VHKGIPHHFR AIVWQLLCSA QSMPIKDQYS ELLKMTSPCE bmy_20449T0/1-441 ---------- ---------- ---------- --MPIKDQYS ELLKMTSPCE BACU002813/1-814 RKKEKQVKEL VRKGIPHHFR AIVWQLLCSA QSMPIKDQYS ELLKMTSPCE 201 250 ENSTTRP00000000075/1-715 KLIRRDIART YPEHNFFKEK DSLGQEVLFN VMKAYSLVDR EVGYCQGSAF ENSBTAP00000040066/1-821 KLIRRDIART YPEHNFFKEK DSLGQEVLFN VMKAYSLVDR EVGYCQGSAF ENSP00000359356/1-810 KLIRRDIART YPEHNFFKEK DSLGQEVLFN VMKAYSLVDR EVGYCQGSAF bmy_20449T0/1-441 KLIRRDIART YPEHNFFKEK DSLGQEVLFN VMKAYSLVDR EVGYCQGSAF BACU002813/1-814 KLIRRDIART YPEHNFFKEK DSLGQEVLFN VMKAYSLVDR EVGYCQGSAF 251 300 ENSTTRP00000000075/1-715 IVXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000040066/1-821 IVGLLLMQMP EEEAFCVFVK LMQDYRLREL FKPSMAELGL CMYQFECMIQ ENSP00000359356/1-810 IVGLLLMQMP EEEAFCVFVK LMQDYRLREL FKPSMAELGL CMYQFECMIQ bmy_20449T0/1-441 IVGLLLMQMP EEEAFCVFVK LMQDYRLREL FKPSMAELGL CMYQFECMIQ BACU002813/1-814 IVGLLLMQMP EEEAFCVFVK LMQDYRLREL FKPSMAELGL CMYQFECMIQ 301 350 ENSTTRP00000000075/1-715 EHLPELFVHF QSQSFHTSMY ASSWFLTIFL TTFPLPIATR IFDIFMSEGL ENSBTAP00000040066/1-821 EHLPELFVHF QSQSFHTSMY ASSWFLTIFL TTFPLPIATR IFDIFMSEGL ENSP00000359356/1-810 EHLPELFVHF QSQSFHTSMY ASSWFLTIFL TTFPLPIATR IFDIFMSEGL bmy_20449T0/1-441 ---------- ---------- ---------- ---------- --------GL BACU002813/1-814 EHLPELFVHF QSQSFHTSMY ASSWFLTIFL TTFPLPVATR IFDIFMSEGL 351 400 ENSTTRP00000000075/1-715 EIVFRVGLAL LQMNQAELMQ LDMEGMLQHF QKVIPHQFDG GPDKLIQAAY ENSBTAP00000040066/1-821 EIVFRVGLAL LQMNQAELMQ LDMEGMLQHF QKVIPHQFDG GPDKLIQAAY ENSP00000359356/1-810 EIVFRVGLAL LQMNQAELMQ LDMEGMLQHF QKVIPHQFDG VPDKLIQAAY bmy_20449T0/1-441 EIVFRVGLAL LQMNQAELMQ LDMEGMLQHF QKVIPHQFDG GPDKLIQAAY BACU002813/1-814 EIVFRVGLAL LQMNQAELMQ LDMEGMLQHF QKVIPHQFDG GPDKLIQAAY 401 450 ENSTTRP00000000075/1-715 QVKYNSKKMK KLEKEYTTIK TKEMEEQVEI KRLRTENRLL KQHIETLEK- ENSBTAP00000040066/1-821 QVKYNSKKMK KLEKEYTTIK TKEMEEQVEI KRLRTENRLL KQRIETLEKE ENSP00000359356/1-810 QVKYNSKKMK KLEKEYTTIK TKEMEEQVEI KRLRTENRLL KQRIETLEK- bmy_20449T0/1-441 QVKYNSKKMK KLEKEYTTIK TKEMEEQVEI KRLRTENRLL KQRIETLEKG BACU002813/1-814 QVKYNSKKMK KLEKEYTTIK TKEMEEQVEI KRLRTENRLL KQRIETLEQG 451 500 ENSTTRP00000000075/1-715 ---------- ---------- ---------- ---------- --------HK ENSBTAP00000040066/1-821 SASLADRLIQ ---------- ---------- ---------- --------HK ENSP00000359356/1-810 ---------- ---------- ---------- ---------- --------HK bmy_20449T0/1-441 QVTRAQEAEE NYLIKRELAN IKQQSDEASA KLEQAESTIR KLQHQQQWHK BACU002813/1-814 QVTRAQEAEE NYLIKRELAN IKQQSDEASA KLEQAENTIR KLQHQQQWHK 501 550 ENSTTRP00000000075/1-715 CSSNYNEDFV LQLEKELVQA RLSEAESQCA LKEMQDKVLD IEKRNNSFPD ENSBTAP00000040066/1-821 CSSNYNEDFV LQLEKELVQA RLSEAESQCA LKEMQDKVLD IEKRNNSFPD ENSP00000359356/1-810 CSSNYNEDFV LQLEKELVQA RLSEAESQCA LKEMQDKVLD IEKRNNSLPD bmy_20449T0/1-441 CSSNYNEDFV LQLEKELVQA RLSEAESQCA LKEMQDKVLD IEKRNNSFPD BACU002813/1-814 CSSNYNEDFV LQLEKELVQA RLSEAESQCA LKEMQDKVLD IEKRNNSFPD 551 600 ENSTTRP00000000075/1-715 ENNIARLQEE LIAVKLREAE AITGLKELRQ QVKDLEEHWQ RHLARTTGRW ENSBTAP00000040066/1-821 ENNIARLQEE LIAVKLREAE AIMGLKELRQ QVKDLEEHWQ RHLARTTGRW ENSP00000359356/1-810 ENNIARLQEE LIAVKLREAE AIMGLKELRQ QVKDLEEHWQ RHLARTTGRW bmy_20449T0/1-441 ENNIARLQEE LIAVKLREAE AIMGLKELRQ QVKDLEEHW- ---------- BACU002813/1-814 ENNMARLQEE LIAVKLREAE AIMGLKELRQ QVKDLEEHWQ RHLARTTGRW 601 650 ENSTTRP00000000075/1-715 KDPPKKNAVN ELQDELMTIR LREAETQAEI REIKQRMMEM ETQNQINSNH ENSBTAP00000040066/1-821 KDPPKKNAMI ELQDELMTIR LREAETQAEI REIKQRMMEM ETQNQINSNH ENSP00000359356/1-810 KDPPKKNAMN ELQDELMTIR LREAETQAEI REIKQRMMEM ETQNQINSNH bmy_20449T0/1-441 ---------- ---------- ---------- ---------- --QNQINSNH BACU002813/1-814 KDPPKKNAVN ELQDELMTIR LREAETQAEI REIKQRMMEM ETQNQINSNH 651 700 ENSTTRP00000000075/1-715 LRRAEQEVIN LQEKVQYLSA QNKGLLTQLS EAKRKQAEIE CKNKEEVMAV ENSBTAP00000040066/1-821 LRRAEQEVIN LQEKVQYLSA QNKGLLTQLS EAKRKQAEIE CKNKEEVMAV ENSP00000359356/1-810 LRRAEQEVIS LQEKVQYLSA QNKGLLTQLS EAKRKQAEIE CKNKEEVMAV bmy_20449T0/1-441 LRRAEQEVIN LQEKVQYLSA QNKGLLTQLS EAKRKQAEIE CKNKEEVMAV BACU002813/1-814 LRRAEQEVIN LQEKVQYLSA QNKGLLTQLS EAKRKQAEIE CKNKEEVMAV 701 750 ENSTTRP00000000075/1-715 RLREADSIAA VAELQQHIAE LEIQKEEGKL QGQLNKSDSN QYIRELKDQI ENSBTAP00000040066/1-821 RLREADSIAA VAELQQHIAE LEIQKEEGKL QGQLNKSDSN QYIRELKDQI ENSP00000359356/1-810 RLREADSIAA VAELRQHIAE LEIQKEEGKL QGQLNKSDSN QYIGELKDQI bmy_20449T0/1-441 RLREADSIAA VAELQQHIAE LEIQ------ ---------- ---------- BACU002813/1-814 RLREADSIAA VAELQQHIAE LEIQKEEGKL QGQLNKSDSN QYIRELKDQI 751 800 ENSTTRP00000000075/1-715 AELNHELRCL KGQRGFSGQP PFDGIHIVSH LIGDDESFHS SDEEFIGNSL ENSBTAP00000040066/1-821 AELNHELRCL KGQRGFSSQP PFDGIHIVNH LIGDDESFHS SDEEFIDNSL ENSP00000359356/1-810 AELNHELRCL KGQRGFSGQP PFDGIHIVNH LIGDDESFHS SDEDFIDNSL bmy_20449T0/1-441 ---------- ---------- ---------- ---------- ---------- BACU002813/1-814 AELNHELSCL KGQRGFSSQP PFDGIHIVNH LIGDDESFHS SDEEFVGNSL 801 850 ENSTTRP00000000075/1-715 QESGIGFPLH RKSGLMSLDP TVADGSESEA EDSALKTRES SEVVQKERPL ENSBTAP00000040066/1-821 QESGIGFPLH RKSGPMSLDP TLADGSESEA EDSVLETRDG SRVAQKEQPL ENSP00000359356/1-810 QETGVGFPLH GKSGSMSLDP AVADGSESET EDSVLETRES NQVVQKERPP bmy_20449T0/1-441 ---------- ---------- ---------- ---------- ---------- BACU002813/1-814 QESGIGFPLH RKSGLMSLDP TVADGSESEA EDSALKTRES SEVAQKERPP 851 900 ENSTTRP00000000075/1-715 -RSESYSTTV ENSBTAP00000040066/1-821 -RRASYSTTV ENSP00000359356/1-810 RRRESYSTTV bmy_20449T0/1-441 ---------- BACU002813/1-814 -RSGSYSTTV