KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:05 2014 Check: 00 .. Name: ENSTTRP00000012134/1-512 Len: 621 Check: 72 Weight: 1.00 Name: ENSP00000439018/1-548 Len: 621 Check: 8981 Weight: 1.00 Name: ENSBTAP00000040120/1-551 Len: 621 Check: 7496 Weight: 1.00 Name: bmy_12179T0/1-512 Len: 621 Check: 1474 Weight: 1.00 Name: BACU001842/1-621 Len: 621 Check: 7113 Weight: 1.00 // 1 50 ENSTTRP00000012134/1-512 ---------- ---------- ---------- ---------- ---------- ENSP00000439018/1-548 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040120/1-551 ---------- ---------- ---------- ---------- ---------- bmy_12179T0/1-512 ---------- ---------- ---------- ---------- MAVPSLTPNA BACU001842/1-621 MNSTKPEEPL TGEVTDEEGT EHRPEAPAQL CPSSKLQETC SSCPEIHHST 51 100 ENSTTRP00000012134/1-512 ---------- ---------- ---MAYMPGG GAPAPGVAPV GSQYCVCKVE ENSP00000439018/1-548 ---------- ---------- ---MAHIPSG GAPAAGAAPM GPQYCVCKVE ENSBTAP00000040120/1-551 ---------- ---------- PAPMAYIPGG GAPASGAAPV GSQYCVCKVE bmy_12179T0/1-512 V--------P SDCEELLPPL PTPMAYMPGG GAPAPGVAPV GSQYCVCKVE BACU001842/1-621 VGTSEQPGPK SDCEELLPPL PTPMAYMPGG GAPALGVAPV GSQYCVCKVE 101 150 ENSTTRP00000012134/1-512 LSVSGQNLLD RDVTSKSDPF CVLFTENNGR WSEXXXXXXX XXXXXPAFSK ENSP00000439018/1-548 LSVSGQNLLD RDVTSKSDPF CVLFTENNGR WIEYDRTETA INNLNPAFSK ENSBTAP00000040120/1-551 LSVSGQNLLD RDVTSKSDPF CVLFTEMDGR WMEYDRTETA INNLNPAFSK bmy_12179T0/1-512 LSVSGQNLLD RDVTSKSDPF CVLFTENDGR WSEYDRTETA VNNLNPAFSK BACU001842/1-621 LSVSGQNLLD RDVTSKSDPF CVLFTENDGR WSEYDRTETA VNNLNPAFSK 151 200 ENSTTRP00000012134/1-512 KFVLDYHFEE VQKLKFALFD QDKSSTQLEE HDFLGQFSCS LGTIVSSKKI ENSP00000439018/1-548 KFVLDYHFEE VQKLKFALFD QDKSSMRLDE HDFLGQFSCS LGTIVSSKKI ENSBTAP00000040120/1-551 KFVLDYHFEE VQKLKFALFD QDKSSMQLEE HDFLGQFSCS LGTIVSSKKI bmy_12179T0/1-512 KFVLDYHFEE VQKLKFALFD QDKSSTQLEE HDFLGQFSCS LGTIVSSKKI BACU001842/1-621 KFVLDYHFEE VQKLKFALFD QDKSSTQLEE HDFLGQFSCS LGTIVSSKKI 201 250 ENSTTRP00000012134/1-512 TQPLLLMNDK PAGKGLITIA AQELSDNRVI TLSLVGRKLD KKDLFGKSDP ENSP00000439018/1-548 TRPLLLLNDK PAGKGLITIA AQELSDNRVI TLSLAGRRLD KKDLFGKSDP ENSBTAP00000040120/1-551 TRPLLLMNDK PAGKGLITIA AQELSDNRVI TLSLAGRKLD KKDLFGKSDP bmy_12179T0/1-512 TQPLLLMNDK PAGKGLITIA AQELSDNRVI TLSLVGRKLD KKDLFGKSDP BACU001842/1-621 TQPLLLMNDK PAGKGLITIA AQELSDNRVI TLSLVGRKLD KKDLFGKSDP 251 300 ENSTTRP00000012134/1-512 FLEFYKPGGD GKWMLVHRTE VIKYTLDPVW KPFTVPLVSL CDGDVEKPIQ ENSP00000439018/1-548 FLEFYKPGDD GKWMLVHRTE VIKYTLDPVW KPFTVPLVSL CDGDMEKPIQ ENSBTAP00000040120/1-551 FLEFYKPGDD GKWMLVHRTE VIKYTLDPVW KPFTVPLVSL CDGDMEKPIQ bmy_12179T0/1-512 FLEFYKPGGD GKWMLVHRTE VIKYTLDPVW KPFTVPLVSL CDGDMEKPIQ BACU001842/1-621 FLEFYKPGGD GKWMLVHRTE VIKYTLDPVW KPFTVPLVSL CDGDMEKPIQ 301 350 ENSTTRP00000012134/1-512 VMCYDYDNDG GHDFIGEFQT SVSQMCEARD GIPREFECIN PKKQKKKKNY ENSP00000439018/1-548 VMCYDYDNDG GHDFIGEFQT SVSQMCEARD SVPLEFECIN PKKQRKKKNY ENSBTAP00000040120/1-551 VMCYDYDNDG GHDFIGEFQT SVSQMCEARD GVPREFECIN PKKQKKKKNY bmy_12179T0/1-512 VMCYDYDNDG GHDFIGEFQT S--------- ---------- ---------- BACU001842/1-621 VMCYDYDNDG GHDFIGEFQT SVSQMCEARD GIPREFECIN PKKQKKKKNY 351 400 ENSTTRP00000012134/1-512 KNSGIIILRS CKINRDYSFL DYILGGCQLM FTVGIDFTAS NGNPLDPSSL ENSP00000439018/1-548 KNSGIIILRS CKINRDYSFL DYILGGCQLM FTVGIDFTAS NGNPLDPSSL ENSBTAP00000040120/1-551 KNSGVIILRS CKITRDYSFL DYILGGCQLM FTVGIDFTAS NGNPLDPSSL bmy_12179T0/1-512 ---------- ---------- ---------- --VGIDFTAS NGNPLDPSSL BACU001842/1-621 KNSGIIILRS CKINRDYSFL DYILGGCQLM FTVGIDFTAS NGNPLDPSSL 401 450 ENSTTRP00000012134/1-512 HYINPMGTNE YLSAIWAVGQ IIQDYDSDKM FPALGFGAQL PPDWKVSHEF ENSP00000439018/1-548 HYINPMGTNE YLSAIWAVGQ IIQDYDSDKM FPALGFGAQL PPDWKVSHEF ENSBTAP00000040120/1-551 HYINPMGTNE YLSAIWAVGQ IIQDYDSDKM FPALGFGAQL PPDWKVSHEF bmy_12179T0/1-512 HYINPMGTNE YLSAIWAVGQ IIQDYDSDKM FPALGFGAQL PPDWKVSHEF BACU001842/1-621 HYINPVGTNE YLSAIWAVGQ IIQDYDSDKM FPALGFGAQL PPDWKVSHEF 451 500 ENSTTRP00000012134/1-512 AINFNPTNPF CSGVDGIAQA YSACLPHIRF YGPTNFSPIV NHVARFAAQA ENSP00000439018/1-548 AINFNPTNPF CSGVDGIAQA YSACLPHIRF YGPTNFSPIV NHVARFAAQA ENSBTAP00000040120/1-551 AINFNPTNPF CSGVDGIAQA YSACLPHIRF YGPTNFSPIV NHVARFAAQA bmy_12179T0/1-512 AINFNPTNPF CSGVDGIAQA YSACLPHIRF YGPTNFSPIV NHVARFAAQA BACU001842/1-621 AINFNPTNPF CSGVDGIAQA YSACLPHIRF YGPTNFSPIV NHVARFAAQA 501 550 ENSTTRP00000012134/1-512 TQQQTAMQYF ILLIITDGVI SDMEETRHAV VQASKLPMSI IIVGVGNADF ENSP00000439018/1-548 TQQRTATQYF ILLIITDGVI SDMEETRHAV VQASKLPMSI IIVGVGNADF ENSBTAP00000040120/1-551 TQQQTATQYF ILLIITDGVI SDMEETRHAV VQASKLPMSI IIVGVGNADF bmy_12179T0/1-512 TQQQTAMQYF ILLIITDGVI SDMEETRHAV VQASKLPMSI IIVGVGNADF BACU001842/1-621 TQQQTAMQYF ILLIITDGVI SDMEETRHAV VQASKLPMSI IIVGVGNADF 551 600 ENSTTRP00000012134/1-512 AAMEFLDGDN RTLRSH-GEE AARDIVQFVL YREFCN---- ---------- ENSP00000439018/1-548 AAMEFLDGDS RMLRSHTGEE AARDIVQFVP FREFRNAAKE TLAKAVLAEL ENSBTAP00000040120/1-551 AAMEFLDGDS RMLRSHTGEE AARDIVQFVP FREFRNAAKE TLAKAVLAEL bmy_12179T0/1-512 AAMEFLDGDS RTLRSHTGEE AARDIVQFVP FREFRNAAKE TLAKAVLAEL BACU001842/1-621 AAMEFLDGDS RTLRSHTGEE AARDIVQFVP FREFRNAAKE TLAKAVLAEL 601 650 ENSTTRP00000012134/1-512 ---------- ---------- - ENSP00000439018/1-548 PQQVVQYFKH KNLPPTNSEP A ENSBTAP00000040120/1-551 PQQVVQYFKH KNLPPTNSEP A bmy_12179T0/1-512 PQQVVQYFKH KNLPPTNSEP A BACU001842/1-621 PQQVVQYFKH KNLPPTNSEP A