KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:05 2014 Check: 00 .. Name: ENSTTRP00000002704/1-395 Len: 395 Check: 9151 Weight: 1.00 Name: ENSBTAP00000040137/1-395 Len: 395 Check: 9959 Weight: 1.00 Name: bmy_09390T0/1-274 Len: 395 Check: 2283 Weight: 1.00 Name: BACU018676/1-395 Len: 395 Check: 290 Weight: 1.00 // 1 50 ENSTTRP00000002704/1-395 MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH ENSBTAP00000040137/1-395 MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH bmy_09390T0/1-274 MDEEPERTKR WEGGYERTW- ---------- ---------- -----VFEHH BACU018676/1-395 MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH 51 100 ENSTTRP00000002704/1-395 GQVRLGMMRH LYVVVDGSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP ENSBTAP00000040137/1-395 GQVRLGMMRH LYVVVDGSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP bmy_09390T0/1-274 GQVRLGMMRH LYVVVDGSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP BACU018676/1-395 GQVRLGMMRH LYVVVDGSRT MEDQELKPNR LTCTLKLLEY FVEEYFDQNP 101 150 ENSTTRP00000002704/1-395 ISQIGIIVTK SKRAEKLTEL SGNSRKHIIS LKKAVDMTCH GEPSLYNSLS ENSBTAP00000040137/1-395 ISQIGIIVTK SKRAEKLTEL SGNPRKHITS LKKAVDMTCH GEPSLYNSLS bmy_09390T0/1-274 ISQIGIIVTK SKRAEKLTEL S--------- ---------- ---------- BACU018676/1-395 ISQIGIIVTK SKRAEKLTEL SGNPRKHIIS LKKAVDMTCH GEPSLYNSLS 151 200 ENSTTRP00000002704/1-395 MAMQTLKHMP GHTSREVLII FSSLTTCDPS NIYDLIKTLK AAKIRVSVIG ENSBTAP00000040137/1-395 MAMQTLKHMP GHTSREVLII FSSLTTCDPS NIYDLIKSLK AAKIRVSIIG bmy_09390T0/1-274 ---------- ---------- ---------- ---------- ---------- BACU018676/1-395 MAMQTLKHMP GHTSREVLII FSSLTTCDPS NIYDLIKTLK AAKIRVSVIG 201 250 ENSTTRP00000002704/1-395 LSAEVRVCTV LARETGGTYH VILDESHYKE LLTHHVSPPP ASSSSECSLI ENSBTAP00000040137/1-395 LSAEVRVCTA LARETGGTYH VILDESHYKE LLTHHVSPPP ASSNSECSLI bmy_09390T0/1-274 ---------- ------GTYH VILDESHYKE LLTHHVSPPP ASSSSECSLI BACU018676/1-395 LSAEVRVCTV LARETGGTYH VILDESHYKE LLTHHVSPPP ASSSSECSLI 251 300 ENSTTRP00000002704/1-395 RMGFPQHTIA SLSDQDAKPS FSMAHLDSNT EPGLTLGGYF CPQCRAKYCE ENSBTAP00000040137/1-395 RMGFPQHTIA SLSDQDAKPS FSMAHLDSNT EPGLTLGGYF CPQCRAKYCE bmy_09390T0/1-274 RMGFPQHTIA SLSDQDAKPS FSMAHLDSNT EPGLTLGGYF CPQCRAKYCE BACU018676/1-395 RMGFPQHTIA SLSDQDAKPS FSMAHLDSNT EPGLTLGGYF CPQCRAKYCE 301 350 ENSTTRP00000002704/1-395 LPVECKICXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXFCYACQG ENSBTAP00000040137/1-395 LPVECKICGL TLVSAPHLAR SYHHLFPLDA FQEIPLEEHN GERFCYACQG bmy_09390T0/1-274 LPVECKICGL TLVSAPHLAR SYHHLFPLDA FQDIPLEEHN GERFCYACQG BACU018676/1-395 LPVECKICGL TLVSAPHLAR SYHHLFPLDA FQDIPLEEHN GERFCYACQG 351 400 ENSTTRP00000002704/1-395 ELKDQHVYVC TVCQNVFCVD CDIFVHDSLH CCPGCIHKIP APSAI ENSBTAP00000040137/1-395 ELKDQHVYVC SVCQNVFCVD CDVFVHDSLH CCPGCIHKIP FLSGI bmy_09390T0/1-274 ELKDQHVYVC TVCQNVFCVD CDIFVHDSLH CCPGCIHKIP APSAI BACU018676/1-395 ELKDQHVYVC TVCQNVFCVD CDIFVHDSLH CCPGCIHKIP APSAI