KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:07 2014 Check: 00 .. Name: BACU011546/1-119 Len: 375 Check: 5413 Weight: 1.00 Name: ENSP00000225276/1-374 Len: 375 Check: 7747 Weight: 1.00 Name: ENSBTAP00000040192/1-347 Len: 375 Check: 3060 Weight: 1.00 Name: bmy_13772T0/1-258 Len: 375 Check: 4581 Weight: 1.00 Name: ENSTTRP00000015095/1-332 Len: 375 Check: 3385 Weight: 1.00 // 1 50 BACU011546/1-119 ---------- ---------- ---------- ---------- ---------- ENSP00000225276/1-374 MGLPRGSFFW LLLLLTAACS GLLFALYFSA VQRYPGPAAG ARDTT-SFEA ENSBTAP00000040192/1-347 MGLQRGRLFW PLLLLAAVCS GILVALYSSA VELHLGPRTE ARNTTSSSQA bmy_13772T0/1-258 MGLPRGPLFW LLLLFAVVCS GILVALYSSA VKSYPGPLTG ARNIT-SSRA ENSTTRP00000015095/1-332 ---------- ---------- ---------- ---------- --NIT-SSQA 51 100 BACU011546/1-119 ---------- ---------- ---------- ---------- ---------- ENSP00000225276/1-374 FFQSKASNSW TGKGQACRHL LHLAIQRHPH FRGLFNLSIP VLLWGDLFTP ENSBTAP00000040192/1-347 FFGPKAPNSR TRKNLLCRHP LSLAVQRHPR FRNLFNLSTP VLLSGDLFTP bmy_13772T0/1-258 FFGPKASNSR TRKNLPCRHP LYLAIRRHPH FRDLFDLSIP VLLSGNLFTQ ENSTTRP00000015095/1-332 FFGPKASNST TRKNLPCRHP LYLAIQRHPH FRDLFDLSIP VLLSGNLFTQ 101 150 BACU011546/1-119 ---------- ---------- ---------- ---------- ---------- ENSP00000225276/1-374 ALWDRLSQHK APYGWRGLSH QVIASTLSLL NGSESAKLFA PPRDTPPKCI ENSBTAP00000040192/1-347 QLWDSLSQHK APYGWQGLSH QAITSTLSLL NGSESTRLFA VSRELLPGCI bmy_13772T0/1-258 ELWDSLSRHK APYGWQGLSS QAIASTLSLL NGSESTRLFT VSRELLPGCI ENSTTRP00000015095/1-332 ELWDSLSRHK APYGWQGLSG QAIASTLSLL NGSESTRLFA VSRELLPGCI 151 200 BACU011546/1-119 ---------- ---------- ---------- -----MYEDT PSTYTASL-- ENSP00000225276/1-374 RCAVVGNGGI LNGSRQGPNI DAHDYVFRLN GAVIKGFERD VGTKTSFYGF ENSBTAP00000040192/1-347 RCAVVGNGGI LNGSRQGQNI DAHDYVFRLN GAVIKGFEND VGTKISFYGF bmy_13772T0/1-258 RCAVVGNGGI LNGSRQGQNI DAHDYVFRLN GAVIKGFEND VGTKTSFYGF ENSTTRP00000015095/1-332 RCAVVGNGGI LNGSRQGQNI DAHDYVFRLN GAVIKGFEKD VGTKTSFYGF 201 250 BACU011546/1-119 ------TTLF EYYTL----- -----MEVVF YQS------- ---------- ENSP00000225276/1-374 TVNTMKNSLV SYWNLGFTSV PQGQDLQYIF IPSDIRDYVM LRSAILGVPV ENSBTAP00000040192/1-347 TVNTMKNSLI SYSNVGFTSV PQGQYLRYIF IPSDIRDYLM LRSAILGVPV bmy_13772T0/1-258 TVNTMKNSLI SYSNLGFTSV PQGQDLRYIF IPSDIRDYVM LRSAILGVPV ENSTTRP00000015095/1-332 TVNTMKNSLI SYSNLGFTSV PQGQDLRYIF IPSDIRDYMM LRSAILGVPV 251 300 BACU011546/1-119 ---------- ---------- ---------- ------RFLK SKWINTKFRD ENSP00000225276/1-374 PEGLDKGDRP HAYFGPEASA SKFKLLHPDF ISYLTERFLK SKLINTHFGD ENSBTAP00000040192/1-347 PEGTDKGD-- ---------- ---------- ------RFLK SKLINTKFGD bmy_13772T0/1-258 PEGPDKGDR- ---------- ---------- ---------- ---------- ENSTTRP00000015095/1-332 PEGPDKGDRP QTYFGPEASA SKFKLLHPDF ISYLTERFLK SKWINTKFRD 301 350 BACU011546/1-119 LYMPSTGALM LLTALHTCDQ VSAYGFITSN YQKFSDHYFE RIKKPLIFYV ENSP00000225276/1-374 LYMPSTGALM LLTALHTCDQ VSAYGFITSN YWKFSDHYFE RKMKPLIFYA ENSBTAP00000040192/1-347 LYMPSTGALM LLTALHTCDQ VSAYGFITSN YQKFSDHYFD RMKKPLIFYA bmy_13772T0/1-258 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015095/1-332 LYMPSTGALM LLTALHTCDQ VSAYGFITSN YQKFSDHYFE RIKQPLIFYV 351 400 BACU011546/1-119 NHDLSLEATL WKDLHKAGIL WLYQR ENSP00000225276/1-374 NHDLSLEAAL WRDLHKAGIL QLYQR ENSBTAP00000040192/1-347 NHDLSLEATL WRDLHKAGIL WLYQR bmy_13772T0/1-258 ---------- ---------- ----- ENSTTRP00000015095/1-332 NHDLSLEATL WKDLHKAGIL WLYQR