KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:10 2014 Check: 00 .. Name: ENSTTRP00000007628/1-714 Len: 762 Check: 2296 Weight: 1.00 Name: ENSP00000376268/1-719 Len: 762 Check: 8128 Weight: 1.00 Name: ENSBTAP00000040207/1-715 Len: 762 Check: 7302 Weight: 1.00 Name: bmy_20244T0/1-681 Len: 762 Check: 7757 Weight: 1.00 Name: BACU011555/1-727 Len: 762 Check: 2080 Weight: 1.00 // 1 50 ENSTTRP00000007628/1-714 MVQKYQSPVR VYKHPFELIM AAYERRFPTC PLIPMFVDSD TVNEFKSEDG ENSP00000376268/1-719 MVQKYQSPVR VYKYPFELIM AAYERRFPTC PLIPMFVGSD TVNEFKSEDG ENSBTAP00000040207/1-715 MVQKYQSPVR VYKHPFELIM AAYERRFPTC PLIPMFVDSD TVNEFRSEDG bmy_20244T0/1-681 ---------- ---------- ---------- ----MFVDSD TVNEFRSEDG BACU011555/1-727 ---------- ---------- ---------- ----MFVDSD TVNEFRSEDG 51 100 ENSTTRP00000007628/1-714 AIHVIERRCK LDIDAPRLLK KIAGVDYVYF IQKNSLNSRE RTLHIEARNE ENSP00000376268/1-719 AIHVIERRCK LDVDAPRLLK KIAGVDYVYF VQKNSLNSRE RTLHIEAYNE ENSBTAP00000040207/1-715 AIHVIERRCK LDIDAPRLLK KIAGVDYVYF IQKNSLNSRE RTLHIEAHNE bmy_20244T0/1-681 AIHVVERRCK LDIDAPRLLK KIAGVDYVYF IQKNSLNSRE RTLHIEARNE BACU011555/1-727 AIHVVERRCK LDIDAPRLLK KIAGVDYVYF IQKNSLNSRE RTLHIEARNE 101 150 ENSTTRP00000007628/1-714 TFSNRVIINE HCCYSVHPEN EDWTCFEQSA SLDIKSFFGF ESTVEKIAMK ENSP00000376268/1-719 TFSNRVIINE HCCYTVHPEN EDWTCFEQSA SLDIKSFFGF ESTVEKIAMK ENSBTAP00000040207/1-715 TFSNRVIINE LCCYSVHPEN EDWTCFEQSA SLDIKSFFGF ESTVEKIAMK bmy_20244T0/1-681 TFSNRVIINE HCCYSVHPEN EDWTCFEQSA SLDIKSFFGF ESTVEKIAMK BACU011555/1-727 TFSNRVIINE HCCYSVHPEN EDWTCFEQSA SLDIKSFFGF ESTVEKIAMK 151 200 ENSTTRP00000007628/1-714 QYTSNIKKGK EIIEYYLRQL EEEGITFVPR WTPPSLAPSS EMSSS-CKKP ENSP00000376268/1-719 QYTSNIKKGK EIIEYYLRQL EEEGITFVPR WSPPSITTSS ETSSSSSKKQ ENSBTAP00000040207/1-715 QYTSNIKKGK EIIEYYLRQL EEEGITFVPR WTPPAAAPSL ETSLS-CKKP bmy_20244T0/1-681 QYTSNIKKGK EIIEYYLRQL EEEGITFVPR WTPPSLAPSS EMSSS-CKKP BACU011555/1-727 QYTSNIKKGK EIIEYYLRQL EEEGITFVPR WTPPSLAPSS EMSSS-CKKP 201 250 ENSTTRP00000007628/1-714 AAPLAVVVPD PALKEGLSSE PLSTPSGVPE PAVGTPDDKL DADYIKRYLG ENSP00000376268/1-719 AASMAVVIPE AALKEGLSGD ALSSPS-APE PVVGTPDDKL DADYIKRYLG ENSBTAP00000040207/1-715 AASLTVVVPD PTLKEGLSGE PLSTPSGAAE PTAGTPDDKL DADYIKRYLG bmy_20244T0/1-681 AAPLAVVVPD PALKEGLSSE PLSTPSGAPE PAVGTPDDKL DADYIKRYLG BACU011555/1-727 AVPLAVVVPD PALKEGLSSE PLSTPSGAPE PAVGTPDDKL DADYIKRYLG 251 300 ENSTTRP00000007628/1-714 DLTPLQESCL IRLRQWLQET HKGKIPKDEH ILRFLRARDF NIDKARETLC ENSP00000376268/1-719 DLTPLQESCL IRLRQWLQET HKGKIPKDEH ILRFLRARDF NIDKAREIMC ENSBTAP00000040207/1-715 DLTPLQESCL IRLRQWLQET HKGKIPKDEH ILRFLRARDF NIDKARETMC bmy_20244T0/1-681 DLTPLQESCL IRLRQWLQET HKGKIPKDEH ILRFLRARDF NIDKARETMC BACU011555/1-727 DLTPLQESCL IRLRQWLQET HKGKIPKDEH ILRFLRARDF NIDKARETMC 301 350 ENSTTRP00000007628/1-714 QSLTWRKQHQ VDYILDTWQP PQVLQDYYAG GWHHHDKDGR PLYVLRLGQM ENSP00000376268/1-719 QSLTWRKQHQ VDYILETWTP PQVLQDYYAG GWHHHDKDGR PLYVLRLGQM ENSBTAP00000040207/1-715 QSLTWRKQHQ VDYILDTWHP PQVLQDYYAG GWHHHDKDGR PLYVLRLGQM bmy_20244T0/1-681 QSLTWRKQHQ VDYILDTWQP PRVLQDYYAG GWHHHDKDGR PLYVLRLGQM BACU011555/1-727 QSLTWRKQHQ VDYILDTWQP PQVLQDYYAG GWHHHDKDGR PLYVLRLGQM 351 400 ENSTTRP00000007628/1-714 DTKGLVRALG EEALLRYVLS INEEGLRRCE ENTKVFGRPI SSWTCLVDLE ENSP00000376268/1-719 DTKGLVRALG EEALLRYVLS INEEGLRRCE ENTKVFGRPI SSWTCLVDLE ENSBTAP00000040207/1-715 DTKGLVRALG EEALLRYVLS INEEGLRRCE ENTKVFGRPI SSWTCLVDLE bmy_20244T0/1-681 DTKGLVRALG EEALLRYVLS INEEGLRRCE ENTKVFGRPI SSWTCLVDLE BACU011555/1-727 DTKGLVRALG EEALLRYVLS INEEGLRRCE ENTKVFGRPI SSWTCLVDLE 401 450 ENSTTRP00000007628/1-714 GLNMRHLWRP GVKALLRIIE VVEANYPETL GRLLILRAPR VFPVLWTLVS ENSP00000376268/1-719 GLNMRHLWRP GVKALLRIIE VVEANYPETL GRLLILRAPR VFPVLWTLVS ENSBTAP00000040207/1-715 GLNMRHLWRP GVKALLRIIE VVEANYPETL GRLLILRAPR VFPVLWTLVS bmy_20244T0/1-681 GLNMRHLWRP GVKALLRTIE VVEANYPETL GRLLILRAPR VFPVLWTLVS BACU011555/1-727 GLNMRHLWRP GVKALLRTIE VVEANYPETL GRLLILRAPR VFPVLWTLVS 451 500 ENSTTRP00000007628/1-714 PFIDDNTRRK FLIYAGNDYQ GPGGLLDYID KEIIPDFLSG ECMXXXXXXX ENSP00000376268/1-719 PFIDDNTRRK FLIYAGNDYQ GPGGLLDYID KEIIPDFLSG ECMCEVPEGG ENSBTAP00000040207/1-715 PFIDDNTRRK FLIYAGNDYQ GPGGLLDYID KEIIPDFLSG ECMCEVPEGG bmy_20244T0/1-681 PFIDDNTRRK FLIYAGNDYQ GPGGLLDYID KEIIPDFLSG ECMCEVPEGG BACU011555/1-727 PFIDDNTRRK FLIYAGNDYQ GPGGLLDYID KEIIPDFLSG ECMCEVPEGG 501 550 ENSTTRP00000007628/1-714 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIL VQIVDASSVI ENSP00000376268/1-719 LVPKSLYRTA EELENEDLKL WTETIYQSAS VFKGAPHEIL IQIVDASSVI ENSBTAP00000040207/1-715 LVPKSLYRTA EELENEDLKL WTETIYQSAS VFKGAPHEIL IQIVDASSVI bmy_20244T0/1-681 LVPKSLYRTA EELENEDLKL WTETIYQSAS VFKGAPHEIL IQIVDASSVI BACU011555/1-727 LVPKSLYRTA EELENEDLKL WTETIYQSAS VFKGAPHEIL IQIVDASSVI 551 600 ENSTTRP00000007628/1-714 TWDFDVCKGD IVFNIYHSKR SPQPPKKDSL GAHSITSPGG NNAQLIDRIW ENSP00000376268/1-719 TWDFDVCKGD IVFNIYHSKR SPQPPKKDSL GAHSITSPGG NNVQLIDKVW ENSBTAP00000040207/1-715 TWDFDVCKGD IVFNIYHSKR SPQPPKKDSL GAHSITSPGG NNVQLIDRVW bmy_20244T0/1-681 TWDFDVCKGD IVFNIYHSKR SPQPPKKDSL GAHSITSPGG NNVQLIDRIW BACU011555/1-727 TWDFDVCKGD IVFNIYHSKR SPQPPKKDSL GAHSITSPGG NNVQLIDRIW 601 650 ENSTTRP00000007628/1-714 QLGRDYSMVE SPLICKEGES VQGSHVTRWP GFYILQWKFH SMPACAATSL ENSP00000376268/1-719 QLGRDYSMVE SPLICKEGES VQGSHVTRWP GFYILQWKFH SMPACAASSL ENSBTAP00000040207/1-715 QLGRDYSMVE SPLICKEGES VQGSHVTRWP GFYILQWKFH STPACAATNL bmy_20244T0/1-681 QLGRDYSMVE SPLICKEGES VQGSHVTRWP GFYILQWKFH SMPACAATSL BACU011555/1-727 QLGRDYSMVE SPLICKEGES VQGSHVTRWP GFYILQWKFH SMPACAATSL 651 700 ENSTTRP00000007628/1-714 PRVDDVLASL QVSSHKCKVM YYTEVIGSED FRGSMTSLES SHSGFSQLSA ENSP00000376268/1-719 PRVDDVLASL QVSSHKCKVM YYTEVIGSED FRGSMTSLES SHSGFSQLSA ENSBTAP00000040207/1-715 PRVDDVLASL QVSSHKCKVM YYTEVIGSED FRGSMTSLES SHSGFSQLSA bmy_20244T0/1-681 PRMDDMLASL QVSSHKCKVM YYTEVIGSED FRGSMTSLES SHSGFSQLSA BACU011555/1-727 PRMDDMLASL QVSSHKCKVM YYTEVIGSED FRGSMTSLES SHSGFSQLSA 701 750 ENSTTRP00000007628/1-714 ATTSSSQSHS SSMVS----- ---------- ---------- ---------- ENSP00000376268/1-719 ATTSSSQSHS SSMISRWRFC ---------- ---------- ---------- ENSBTAP00000040207/1-715 ATTSSSQSHS SSMISR---- ---------- ---------- ---------- bmy_20244T0/1-681 ATTSSSQSHS SSMISR---- ---------- ---------- ---------- BACU011555/1-727 ATTSSSQSHS SSMISRSGSR DGCRGAARCT SICGRGRLCT LQGSDLGAPT 751 800 ENSTTRP00000007628/1-714 ---------- -- ENSP00000376268/1-719 ---------- -- ENSBTAP00000040207/1-715 ---------- -- bmy_20244T0/1-681 ---------- -- BACU011555/1-727 DQPGRCICRR DQ