KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:15 2014 Check: 00 .. Name: ENSBTAP00000040225/1-545 Len: 624 Check: 3564 Weight: 1.00 Name: ENSP00000269397/1-560 Len: 624 Check: 8199 Weight: 1.00 Name: BACU011586/1-599 Len: 624 Check: 3939 Weight: 1.00 Name: bmy_02287T0/1-532 Len: 624 Check: 7167 Weight: 1.00 Name: ENSTTRP00000014664/1-512 Len: 624 Check: 7736 Weight: 1.00 // 1 50 ENSBTAP00000040225/1-545 -----MELPA VGEHVFAVES IEKKRIRKGR VEYLVKWRGW SPKYNTWEPE ENSP00000269397/1-560 -----MELPA VGEHVFAVES IEKKRIRKGR VEYLVKWRGW SPKYNTWEPE BACU011586/1-599 MAVLTKTIPA TGQTC----S ILYRQIHLGN LEPALP---- ---YNTWEPE bmy_02287T0/1-532 -----MGSP- ---------- ------KESR VTDGAEEEGL DSRYNTWEPE ENSTTRP00000014664/1-512 ---------- ---------- ---------- ---------- ---YNTWEPE 51 100 ENSBTAP00000040225/1-545 ENILDPRLLI AFQNRERQEQ LMGYRKRGPK PKPLVVQVPT FARRSNVLTG ENSP00000269397/1-560 ENILDPRLLI AFQNRERQEQ LMGYRKRGPK PKPLVVQVPT FARRSNVLTG BACU011586/1-599 ENILDPRLLI AFQNRERQEQ LMGYRKRGPK PKPLVVQVPT FARRSNVLTG bmy_02287T0/1-532 ENILDPRLLI AFQNRERQEQ LMGYRKRGPK PKPLVVQVPT FARRSNVLTG ENSTTRP00000014664/1-512 ENILDPRLLI AFQNXXXXXX XXXXXXXXXX XXXXXXXVPT FARRSNVLTG 101 150 ENSBTAP00000040225/1-545 LQDSSADNRA KLELGGQGKG QGHQYELNSK KHHQYQPHSK ERAGKPPPPG ENSP00000269397/1-560 LQDSSTDNRA KLDLGAQGKG QGHQYELNSK KHHQYQPHSK ERAGKPPPPG BACU011586/1-599 LQDSSADNRA KLELGGQGKG QGHQYELNSK KHHQYQPHSK ERAGKPPPPG bmy_02287T0/1-532 LQDSSADNRA KLELGGQGKG QGHQYELNSK KHHQYQPHSK ERAGKPPPPG ENSTTRP00000014664/1-512 LQDSSADNRA KLELGGQGKG QGHQYELNSK KHHQYQPHSK ERAGKPPPPG 151 200 ENSBTAP00000040225/1-545 KSGKYYYQLN SKKHHPYQPD PKMYDLQYQG GHKEAPSPTC PDLGSKSHPP ENSP00000269397/1-560 KSGKYYYQLN SKKHHPYQPD PKMYDLQYQG GHKEAPSPTC PDLGAKSHPP BACU011586/1-599 KSGKYYYQLN SKKHHPYQPD PKMYDLQYQG SHKEAPSPTC PDLGAKSHPP bmy_02287T0/1-532 KSGKYYYQLN SKKHHPYQPD PKMYDLQYQG SHKEAPSPTC PDLGAKSHPP ENSTTRP00000014664/1-512 KSGKYYYQLN SKKHHPYQPD PKMYDLQYQG SHKEAPSPTC PDLGAKSHPP 201 250 ENSBTAP00000040225/1-545 DKWPHGGGAK GYLGAVKPLA GTAGAPGKGS EKGPPNGMTP APKEAVPSNH ENSP00000269397/1-560 DKWAQGAGAK GYLGAVKPLA GAAGAPGKGS EKGPPNGMMP APKEAVTGNG BACU011586/1-599 DKWAHGGGAK GYLGAVKPLA GAVGAPGKGS EKGPPNGMTP APKEAVTGNG bmy_02287T0/1-532 DKWAHGGGAK GYLGAVKPLA GAVGAPGKGS EKGPPNGMTP APKEAVTGNG ENSTTRP00000014664/1-512 DKWAHGGGAK GYLGAVKPLA GAVGAPGKGS EKGPPNGMTP APKEAVTGNG 251 300 ENSBTAP00000040225/1-545 RGGITKSYKG TQKAGRNQLI EKHCVEKSRG SVPACYLTSQ ESCE----CW ENSP00000269397/1-560 IGGKMKIVKN KNKNGRIVIV MSKYMEN--- GMQAVKIKSG EVAEGEARSP BACU011586/1-599 IGGKMKIVKN KNKNGRIVIV MSKYMEN--- GMQAVKIKSG EAAEGEARSP bmy_02287T0/1-532 IGGKMKIVKN KNKNGRIVIV MSKYMEN--- GMQAVKIKSG EAAEGEARSP ENSTTRP00000014664/1-512 IGGKMKIVKN KNKNGRIVIV MSKYMEN--- GMQAVKIKSG EAAEGEARSP 301 350 ENSBTAP00000040225/1-545 QGDRRIMEER QSQL-KTGNK CCLASQGNTP HRPKKKKKRE KERDKSGQTV ENSP00000269397/1-560 SHKKRAADER HPPADRTFKK AAGAEEKKVE APPKRREEEV SGVSDPQPQD BACU011586/1-599 SHKKRAAEER HPPADRTFKK AAGAEEKKVE KPSKRREEEG PGAGDPQPQE bmy_02287T0/1-532 SHKKRAAEER HPPADRTFKK AAGAEEKKVE TPSKRREEEG PGAGDLQPQE ENSTTRP00000014664/1-512 SHKKRAAEER HPPADRTFKK AAGAEEKKVE TPSKRREEEG PGAGDPQPQE 351 400 ENSBTAP00000040225/1-545 RGSLCLCPAL RSLCTQRVSG QDVPLQL--- KKKKTHIPKY H------HHH ENSP00000269397/1-560 AGSRKLSPTK EAFGEQPLQL TTKPDLLAWD PARNTHPPSH HPHPHPHHHH BACU011586/1-599 AGSRKLSPTK EAFGEQPLQL TTKPDLLAWD PPRGTQPPS- H------HHH bmy_02287T0/1-532 AGSRKLSPTK EAFGEQPLQL TTKPDLLAWD PPRGTQPPS- H------HHH ENSTTRP00000014664/1-512 AGSRKLSPTK EAFGEQPLQL TTKPDLLAWD PPRGTQLPSH H------HHH 401 450 ENSBTAP00000040225/1-545 HHHHHHHHAV DLNLSHARKR CLSETHSERE PCKKRLTARS ISTPTCLGGS ENSP00000269397/1-560 HHHHHHHHAV GLNLSHVRKR CLSETHGERE PCKKRLTARS ISTPTCLGGS BACU011586/1-599 HHHHHHHHAV DLNLSHARKR CLSETHGERE PCKKRLTARS ISTPTCLGGS bmy_02287T0/1-532 HHHHHHHHAV DLNLSHARKR CLSETHGERE PCKKRLTARS ISTPTCLGGS ENSTTRP00000014664/1-512 HHHHHHHHAV DLNLSHARKR CLSETHGERE PCKKRLTARS ISTPTCLGGS 451 500 ENSBTAP00000040225/1-545 PAAERPADVP PAAALPQPEV ILLDSDLDEP IDLRCVKTRS ---------- ENSP00000269397/1-560 PAAERPADLP PAAALPQPEV ILLDSDLDEP IDLRCVKTRS ---------- BACU011586/1-599 PTAERPADVP PAAALPQPEV ILLDSDLDEP IDLRCVKTRG XXXXXXXXXX bmy_02287T0/1-532 PTAERPADVP PAAALPQPEV ILLDSDLDEP IDLRCVKTRG ---------- ENSTTRP00000014664/1-512 PTAERPADVP PAAALPQPEV ILLDSDLDEP IDLRCVKTRG ---------- 501 550 ENSBTAP00000040225/1-545 ---------- ---------- ---------- ---------- ------EAGE ENSP00000269397/1-560 ---------- ---------- ---------- ---------- ------EAGE BACU011586/1-599 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02287T0/1-532 ---------- ---------- ---------- ---------- ------EAGE ENSTTRP00000014664/1-512 ---------- ---------- ---------- ---------- ------EAGE 551 600 ENSBTAP00000040225/1-545 PPSALPVKPE APATAAV--- -AAAPATAAE KPPTEAQDEP EEPLSEFKPF ENSP00000269397/1-560 PPSSLQVKPE TPASAAVAVA AAAAPTTTAE KPPAEAQDEP AESLSEFKPF BACU011586/1-599 XXXXXXXXXX XXXXXXX--- -XXXXXXAAE KPPTEAQDEP EEPLSEFKPF bmy_02287T0/1-532 PPSALQVKPE APATAAV--- -AAEPATAAE KPPTEAQDEP EEPLSEFKPF ENSTTRP00000014664/1-512 PPSALQVKPE APATAAV--- -AAAPATAAE KPPTEAQDEP EEPLSEFKPF 601 650 ENSBTAP00000040225/1-545 FGNIIITDVT ANCLTVTFKE YVTV ENSP00000269397/1-560 FGNIIITDVT ANCLTVTFKE YVTV BACU011586/1-599 FGNIIITDVT ANCLTVTFKE YVTV bmy_02287T0/1-532 FGNIIITDVT ANCLTVTFKE YVTV ENSTTRP00000014664/1-512 FGNIIITDVT ANCLTVTFKE YVTV