KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:15 2014 Check: 00 .. Name: ENSBTAP00000040246/1-419 Len: 441 Check: 8328 Weight: 1.00 Name: ENSP00000348211/1-418 Len: 441 Check: 6152 Weight: 1.00 Name: ENSTTRP00000000563/1-438 Len: 441 Check: 3559 Weight: 1.00 Name: bmy_04932T0/1-420 Len: 441 Check: 6339 Weight: 1.00 Name: BACU014959/1-391 Len: 441 Check: 7414 Weight: 1.00 // 1 50 ENSBTAP00000040246/1-419 ---------- --------MH PRRPDGFDGL GYRGGARDEP GFGGAFPARS ENSP00000348211/1-418 ---------- --------MH PRRPDGFDGL GYRGGARDEQ GFGGAFPARS ENSTTRP00000000563/1-438 VAPGVVASGW ASHPAPSAMH PRRPDGFDGL GYRSGARDEQ GFGGAFPARS bmy_04932T0/1-420 ---------- --------MH PRRPDGFDGL GYRSGARDEQ GFGGAFPARS BACU014959/1-391 ---------- --------MH PRRPDGFDGL GYRSGARDEQ GFGGAFPARS 51 100 ENSBTAP00000040246/1-419 FSSASDLSRW VTSPPDIPGS RNLHWAEESP PRGAPAPCTP PEGPAEGPCP ENSP00000348211/1-418 FSTGSDLGHW VTTPPDIPGS RNLHWGEKSP PYGVPTTSTP YEGPTEEPFS ENSTTRP00000000563/1-438 FSSASDLSHW VTTPPDIPGS RNLHWGEKSP PYGVPPPSTP LEGPAEEPFP bmy_04932T0/1-420 FSSASDLSHW VTTPPDIPGS RNLHWGEKSP PYGVPAPSTP LEGPAEEPFP BACU014959/1-391 FSSASDLSHW VTTPPDIPGS RNLHWGEKSP PYGVPAPSTP LEGPAEEPFP 101 150 ENSBTAP00000040246/1-419 ----GGSGRS GGPRRSTEQL NRFAGFGIGL ASLFTENVLA HPCIVLRRQC ENSP00000348211/1-418 -----SGGGG SVQGQSSEQL NRFAGFGIGL ASLFTENVLA HPCIVLRRQC ENSTTRP00000000563/1-438 RGGGGGGGGG SVPGQSSEQL NRFAGFGIGL ASLFTENVLA HPCIVLRRQC bmy_04932T0/1-420 ---GGGGGGG SVPGQSSEQL NRFAGFGIGL ASLFTENVLA HPCIVLRRQC BACU014959/1-391 ------GGGG SVPGQSSEQL NRFAGFGIGL ASLFTENVLA HPCIVLRRQC 151 200 ENSBTAP00000040246/1-419 QVNYHARHYH LTPFTVINIM YSFNKTQGPR ALWKGMGSTF IVQGITLGAE ENSP00000348211/1-418 QVNYHAQHYH LTPFTVINIM YSFNKTQGPR ALWKGMGSTF IVQGVTLGAE ENSTTRP00000000563/1-438 QVNYHARLYH LTPFTVINIM YSFNKTQGPR ALWKGMGSTF IVQGVTLGAE bmy_04932T0/1-420 QVNYHARHYH LTPFTVINIM YSFNKTQGPR ALWKGMGSTF IVQGVTLGAE BACU014959/1-391 ---------- ---------- ------QGPR ALWKGMGSTF IVQGVTLGAE 201 250 ENSBTAP00000040246/1-419 GIISEFTPLP REISHKWNPK QIGEHLLLKS LTYIVAMPFY SASLIETVQS ENSP00000348211/1-418 GIISEFTPLP REVLHKWSPK QIGEHLLLKS LTYVVAMPFY SASLIETVQS ENSTTRP00000000563/1-438 GIISEFTPLP REISHKWNTK QIGEHLLLKS LTYIVAMPFY SASLIETVQS bmy_04932T0/1-420 GIISEFTPLP REISHKWNPK QIGEHLLLKS LTYIVAMPFY SASLIETVQS BACU014959/1-391 GIISEFTPLP REISHKWNPK QIGEHLLLKS LTYIVAMPFY SASLIETVQS 251 300 ENSBTAP00000040246/1-419 EIIRDGAGIL ECVKEGIGRA IGLGVPHSKR LLPLLSLVFP TVLHGVLHYV ENSP00000348211/1-418 EIIRDNTGIL ECVKEGIGRV IGMGVPHSKR LLPLLSLIFP TVLHGVLHYI ENSTTRP00000000563/1-438 EIIRDNTGIL ECIKEGIGRV IGLGVPHSKR LLPLLSLIFP TVLHGVLHYI bmy_04932T0/1-420 EIIRDNTGIL ECIKEGIGRV IGLGVPHSKR LLPLLSLIFP TVLHGVLHYV BACU014959/1-391 EIIRDNAGIL ECIKEGIGRV IGLGVPHSKR LLPLLSLIFP TVLHGVLHYI 301 350 ENSBTAP00000040246/1-419 ISSVVQKVVL LILKRKAYDG HLAEGASPVQ SMLDAYFPEL IANFAASLCS ENSP00000348211/1-418 ISSVIQKFVL LILKRKTYNS HLAESTSPVQ SMLDAYFPEL IANFAASLCS ENSTTRP00000000563/1-438 ISSVIQKIVL LILKRKTYNS HLAESTSPVQ SMLDAYFPEL IANFAASLCS bmy_04932T0/1-420 ISSVIQKIVL LILKRKTYHS HLAGSASPVQ SMLDAYFPEL IANFAASLCS BACU014959/1-391 ISSVIQKIVL LILKRKTYHS HLAESTSPVQ SMLDAYFPEL IANFAASLCS 351 400 ENSBTAP00000040246/1-419 DVTLYPLETV LHRLHVQGTR TIIDNTDLGY EVLPINTQYE GVRDCVNTIR ENSP00000348211/1-418 DVILYPLETV LHRLHIQGTR TIIDNTDLGY EVLPINTQYE GMRDCINTIR ENSTTRP00000000563/1-438 DVILYPLETV LHRLHIQGTR TIIDNTDLGY EVLPINTQYE GMRDCINTIR bmy_04932T0/1-420 DVILYPLETV LHRLHIQGTR TIIDNTDLGY EVLPINTQYE GMRDCINTIR BACU014959/1-391 DVILYPLETV LHRLHIQGTR TIIDNTDLGY EVLPINTQYE GMRDCINTIR 401 450 ENSBTAP00000040246/1-419 QEEGALGFYK GFGAVVVQYT LHAAVLQITK IIYSTLLQNS A ENSP00000348211/1-418 QEEGVFGFYK GFGAVIIQYT LHAAVLQITK IIYSTLLQNN I ENSTTRP00000000563/1-438 QEEGMLGFYK GFGAVVIQYT LHAAVLQITK IIYSTLLQ-- - bmy_04932T0/1-420 QEEGMLGFYK GFGAVVIQYT LHAAVLQITK IIYSTLLQNS V BACU014959/1-391 QEEGMLGFYK GFGAVVIQYT LHAAVLQITK IIYSTLLQNS V