KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:16 2014 Check: 00 .. Name: ENSTTRP00000006096/1-605 Len: 661 Check: 1784 Weight: 1.00 Name: bmy_02264T0/1-445 Len: 661 Check: 4930 Weight: 1.00 Name: ENSP00000331487/1-608 Len: 661 Check: 9220 Weight: 1.00 Name: ENSBTAP00000040249/1-608 Len: 661 Check: 7859 Weight: 1.00 Name: BACU011614/1-659 Len: 661 Check: 8244 Weight: 1.00 // 1 50 ENSTTRP00000006096/1-605 -----IIRVQ SPDGVKRITA TKRETAATFL KKVAKEFGFQ NNGFSVYINR bmy_02264T0/1-445 MAESIIIRVQ SPDGVKRITA TKRETAATFL KKVAKEFGFQ NNGFSVYINR ENSP00000331487/1-608 MAESIIIRVQ SPDGVKRITA TKRETAATFL KKVAKEFGFQ NNGFSVYINR ENSBTAP00000040249/1-608 MAESIIIRVQ SPDGVKRITA TKRETAATFL KKVAKEFGFQ NNGFSVYINR BACU011614/1-659 MAESIIIRVQ SPDGVKRITA TKRETAATFL KKVAKEFGFQ NNGFSVYINR 51 100 ENSTTRP00000006096/1-605 NKTGEITASS NKSLNLLKIK HGDLLFLFPS SLAGPSSEME TSAPLGLKAC bmy_02264T0/1-445 NKTGEITASS NKSLNLLKIK HGDLLFLFPS SLAGPSSEME TSAPLGLKAS ENSP00000331487/1-608 NKTGEITASS NKSLNLLKIK HGDLLFLFPS SLAGPSSEME TSVPPGFKVF ENSBTAP00000040249/1-608 NKTGEITASS NKSLNLLKIK HGDLLFLFPS NLAGPSSEME TSAPQGLKAC BACU011614/1-659 NKTGEITASS NKSLNLLKIK HGDLLFLFPS SLAGPSSEME TSAPLGLKAS 101 150 ENSTTRP00000006096/1-605 GAPNVVEDEI DQYLSRQDGK IYRSRDPQLC RHGPLGKCVH CVPLEXXXXX bmy_02264T0/1-445 GAPNVMEDEI DQYLSRQDGK IYRSRDPQLC RHGPLGKCVH CVPLEPFDED ENSP00000331487/1-608 GAPNVVEDEI DQYLSKQDGK IYRSRDPQLC RHGPLGKCVH CVPLEPFDED ENSBTAP00000040249/1-608 GAPNVVEDEI DQYLSRQDGK IYRSRDPQLC RHGPLGKCVH CVPLEPFDED BACU011614/1-659 GAPSVVEDEI DQYLSRQDGK IYRSRDPQLC RHGPLGKCVH CVPLEPFDED 151 200 ENSTTRP00000006096/1-605 XXXXXXXXXX XXXXXXXXXX XXXXXXXGKF VALENISCKI KSGCEGHLPW bmy_02264T0/1-445 YLNHLEPPVK HMSFHAYIRK LTGGADKGKF VALENISCKI KSGCEGHLPW ENSP00000331487/1-608 YLNHLEPPVK HMSFHAYIRK LTGGADKGKF VALENISCKI KSGCEGHLPW ENSBTAP00000040249/1-608 YLNHLEPPVK HMSFHAYIRK LTGGADKGKF VALENISCKI KSGCEGHLPW BACU011614/1-659 YLNHLEPPVK HMSFHAYIRK LTGGADKGKF VALENISCKI KSGCEGHLPW 201 250 ENSTTRP00000006096/1-605 PNGICTKCQP SAITLNRQKY RHVDNIMFEN HTVADRFLDF WRKTGNQHFG bmy_02264T0/1-445 PNGICTKCQP SAITLNRQKY RHVDNIMFEN HTVADRFLDF WRKTGNQHFG ENSP00000331487/1-608 PNGICTKCQP SAITLNRQKY RHVDNIMFEN HTVADRFLDF WRKTGNQHFG ENSBTAP00000040249/1-608 PNGICTKCQP SAITLNRQKY RHVDNIMFEN HTVADRFLDF WRKTGNQHFG BACU011614/1-659 PNGICTKCQP SAITLNRQKY RHVDNIMFEN HTVADRFLDF WRKTGNQHFG 251 300 ENSTTRP00000006096/1-605 YLYGRYTEHK DIPLGIRAEV AAIYEPPQIG TQNSLELLED PKAEVVDEIA bmy_02264T0/1-445 YLYGRYTEHK DIPLGIRAEV AAIYEPPQIG TQNSLELLED PKAEVVDEIA ENSP00000331487/1-608 YLYGRYTEHK DIPLGIRAEV AAIYEPPQIG TQNSLELLED PKAEVVDEIA ENSBTAP00000040249/1-608 YLYGRYTEHK DIPLGIRAEV AAIYEPPQIG TQNSLELLED PKAEVVDEIA BACU011614/1-659 YLYGRYTEHK DIPLGIRAEV AAIYEPPQIG TQNSLELLED PKAEVVDEIA 301 350 ENSTTRP00000006096/1-605 AKLGLRKVGW IFTDLVSEDT RKGTVRYSRN KDTYFLSSEE CITAGDFQNK bmy_02264T0/1-445 AKLGLRKVGW IFTDLVSEDT RKGTVRYSRN KDTYFLSSEE CITAGDFQNK ENSP00000331487/1-608 AKLGLRKVGW IFTDLVSEDT RKGTVRYSRN KDTYFLSSEE CITAGDFQNK ENSBTAP00000040249/1-608 AKLGLRKVGW IFTDLVSEDT RKGTVRYSRN KDTYFLSSEE CITAGDFQNK BACU011614/1-659 AKLGLRKVGW IFTDLVSEDT RKGTVRYSRN KDTYFLSSEE CITAGDFQNK 351 400 ENSTTRP00000006096/1-605 HPNICRLSPD GHFGSKFVTA VATGGPDNQV HFEGYQVSNQ CMALVRDECL bmy_02264T0/1-445 HPNICRLSPD GHFGSKFVTA VATGGPDNQV HFEGYQVSNQ CMALVRDECL ENSP00000331487/1-608 HPNMCRLSPD GHFGSKFVTA VATGGPDNQV HFEGYQVSNQ CMALVRDECL ENSBTAP00000040249/1-608 HPNICRLSPD GHFGSKFVTA VATGGPDNQV HFEGYQVSNQ CMALVRDECL BACU011614/1-659 HPNICRLSPD GHFGSKFVTA VATGGPDNQV HFEGYQVSNQ CMALVRDECL 401 450 ENSTTRP00000006096/1-605 LPCKDAPELG YAKESSSEQY VPDVFYKDID KFGNEITQLA RPLPVEYLII bmy_02264T0/1-445 LPCKDAPELG YAKESSSEQY VPDVFYK--- ---------- ---------- ENSP00000331487/1-608 LPCKDAPELG YAKESSSEQY VPDVFYKDVD KFGNEITQLA RPLPVEYLII ENSBTAP00000040249/1-608 LPCKDAPELG YAKESSSEQY VPDVFYKDID KFGNEITQLA RPLPVEYLII BACU011614/1-659 LPCKDAPELG YAKESSSEQY VPDVFYKDID KFGNEITQLA RPLPVEYLII 451 500 ENSTTRP00000006096/1-605 DXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDFHSLAT YLSQNTSSVF bmy_02264T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSP00000331487/1-608 DITTTFPKDP VYTFSISQNP FPIENRDVLG ETQDFHSLAT YLSQNTSSVF ENSBTAP00000040249/1-608 DITTTFPKDP VYTFSISQNP FPIENRDVLG ETQDFHSLAT YLSHNTSSVF BACU011614/1-659 DITTTFPKDP VYTFSISQNP FPIENRDVLG ETQDFHSLAT YLSQNTSSVF 501 550 ENSTTRP00000006096/1-605 LDTISDFHLL LFLVTNDVMP LQDSISLLLE AVRTRNEELA QTWKKSEQWA bmy_02264T0/1-445 ---------- ---------- ---------- --------VK MQWYRKRE-- ENSP00000331487/1-608 LDTISDFHLL LFLVTNEVMP LQDSISLLLE AVRTRNEELA QTWKRSEQWA ENSBTAP00000040249/1-608 LDTISDFHLL LFLVTNDVMP LQDSISLLLE AVRTRNEELA QTWKKSEQWA BACU011614/1-659 LDTISDFHLL LFLVTNDVMP LQDSISLLLE AVRTRNEELA QTWKKSEQWA 551 600 ENSTTRP00000006096/1-605 TIEQLC---- ---------- ---------- ---------- ---------S bmy_02264T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSP00000331487/1-608 TIEQLC---- ---------- ---------- ---------- ---------- ENSBTAP00000040249/1-608 TIEQLC---- ---------- ---------- ---------- ---------- BACU011614/1-659 TIEQLCIFFL YDSDNQTVKG QDVPGTLLAL TFRNRAPIVP TKFPTATPTA 601 650 ENSTTRP00000006096/1-605 KCLTLPQPIA RAQTPALQGS ILLPGPWTPT PDAFASWAME QADLCRAHRC bmy_02264T0/1-445 ---------- ---------- --VDGEQHGR ---------- ---------- ENSP00000331487/1-608 -------STV GGQLPGLHEY GAVGGSTHTA TAAM--WACQ HCTFMNQPGT ENSBTAP00000040249/1-608 -------STV GVQLPGLQEY GAVGGSTHAA SSAM--WACQ HCTFMNQPGT BACU011614/1-659 LCPWVDSGTV GVQLPGLHEY GAVGGSAHTT SAAM--WACQ HCTFMNQPGT 651 700 ENSTTRP00000006096/1-605 FHH------- - bmy_02264T0/1-445 ---------- - ENSP00000331487/1-608 GHCEMCSLPR T ENSBTAP00000040249/1-608 GHCEMCSLPR T BACU011614/1-659 GHCEMCSLPR T