KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:20 2014 Check: 00 .. Name: ENSP00000414109/1-748 Len: 827 Check: 4379 Weight: 1.00 Name: ENSBTAP00000040311/1-671 Len: 827 Check: 412 Weight: 1.00 Name: ENSTTRP00000004146/1-746 Len: 827 Check: 9643 Weight: 1.00 Name: bmy_03194T0/1-791 Len: 827 Check: 1742 Weight: 1.00 Name: BACU010993/1-697 Len: 827 Check: 3851 Weight: 1.00 // 1 50 ENSP00000414109/1-748 MLGTLRAMEG EDVEDDQLLQ KLRASRRRFQ RRMQRLIEKY NQPFEDTPVV ENSBTAP00000040311/1-671 -------MEG EVLSEDELLM KLRDSRCRFQ RRMQQLIEKY NQPFEDGPVI ENSTTRP00000004146/1-746 AFGCLRAMEG EVLGEDALLQ KLRDSRRRFQ RRMQQLIEKY NQPFEDAPVV bmy_03194T0/1-791 -------MEG EVLGEEALLR KLRDSRRRFQ RRMQQLIEKY NQPFEDAPVV BACU010993/1-697 -------MEG EVLGEEALLR KLRDSRRRFQ RRMQQLIEKY NQPFEDAPVV 51 100 ENSP00000414109/1-748 QMATLTYETP QGLRIWGGRL IKERNEGEIQ DSSMKPADRT DGSVQAAAWG ENSBTAP00000040311/1-671 QMSTLTYQTP QGLRIWGGGL VK-RSTGHM- ---------T DGSVRVPAGD ENSTTRP00000004146/1-746 QMSTLTYETP QGLRIWGGRL IKERNTGQIQ GSPVKTDDRT DGSTRVPAGG bmy_03194T0/1-791 QMSTLTYDTP QGLRIWGGRL IKERNTGQIQ GSPVKTDDRT DGPMRVPAGG BACU010993/1-697 QMSTLTYETP QACLI----- -------DFK GSPVKTDDRT DEPTRVPAEG 101 150 ENSP00000414109/1-748 PELPSHRTVL GADSKSGEVD ATSDQEESVA WALAPAVPQS PLKNELRRKY ENSBTAP00000040311/1-671 LELPPPDTPA NGEWSWCWTE ST--QVSDLP SGCQPAVPWS PSKNELRRKY ENSTTRP00000004146/1-746 HELPLPCTQV E-DSVSSDTD TTLFQEDVVA GNLMPAVPWS PLKNELRRKY bmy_03194T0/1-791 HELPLPCTQV E--------- ---------- ------VPWS PVKNELRRKY BACU010993/1-697 HELPLPCTQV E-DSISSDTD TTLFQEDVVA GNLMPAVPWS PVKNELRRKY 151 200 ENSP00000414109/1-748 LTQVDILLQG AEYFECAGNR AGRDVRVTPL PSLASPAVPA PGYCSRISRK ENSBTAP00000040311/1-671 LTQVDILLQD EGCLECAGYG EGKDTHVTLA PSLASPARPA QGYCKDISED ENSTTRP00000004146/1-746 LTQVDILLQD EGCLEGASYG EGKDTRTTLV PSLASPARPA RGYYGGNSEE bmy_03194T0/1-791 LTQVDILLQD EGCLECASYG EGKDTRVTLV PSLASPARPA VGCYGGVSEE BACU010993/1-697 LTQVDILLQD EGGLECASYG EGKDTRVTLV PSLASPARPA RECYGGVSEE 201 250 ENSP00000414109/1-748 SPGDPAKPAS SPREWDPLHP SSTDMALVPR NDSLSLQ-ET SSSSFLSSQP ENSBTAP00000040311/1-671 RPGGPLQPPP SPREGDASHS CSAGQAMMPR GDGIPLH-GT GGGSFSSSPC ENSTTRP00000004146/1-746 SPGGPFQPTS LPREGDALHS SSADLALVPR GDGISLQGGT GGSSFSSGPC bmy_03194T0/1-791 SPGGPFQPTS LPREGDASPS CSADLALVPR GDGISLQGGT GGSSFSSSRC BACU010993/1-697 SPGGPFQPTS SPREGDASRS CSVGLALVPR GDGISLQGGT GGSSFSSSRG 251 300 ENSP00000414109/1-748 FEDDDICNVT ISDLYAGMLH SMSRLLSTKP SSIISTKTFI MQNWNSRRRH ENSBTAP00000040311/1-671 SKGEDVCNAT LSDLYAGMLH SMSRLLGARP SCIISTKTLI GQNWSFRRRH ENSTTRP00000004146/1-746 SEAEDICNAT LSDLYAGMLH SMSCLLGVRP SCVISTKTFI RQHWSSKRRH bmy_03194T0/1-791 SEAEDICNAT LSDLYAGMLH SMSCLLGVRP SCVISTKTFI RQNWSSKRRH BACU010993/1-697 SEAEDVCNAT LSDLYAGMLH SMSCLLGVRP SCVISTKTFI RQNWSSKRRH 301 350 ENSP00000414109/1-748 RYKSRMNKTY CKGARRSQRS SKENFIPCSE PVKGTGALRD CKNVLDVSCR ENSBTAP00000040311/1-671 RCKGRMNRTS CRGGGRSRQS PQERRPPCSE PLEDAGTLRD RGNLPDVSVP ENSTTRP00000004146/1-746 RCKSRMDRTS CRGGGRSRRS PRERRPPGSE PAKDVAVLRD RENVLDVSGH bmy_03194T0/1-791 RCKSRMNRTS CRGGGRSRRS PQERRPPSSE PAKDVAVLRD RKNLLDVSGH BACU010993/1-697 RCKSRMNRTS CRGGGRSRRS PQERRPPSSE PAKDVAVLRD RKNLLDVSGH 351 400 ENSP00000414109/1-748 KTGLKLEKAF LEVNRPQIHK LDPSWKERKV TPSK-YSSLI YFDSSATYNL ENSBTAP00000040311/1-671 KTDLKSGRAL LKVNKPQIHT FTPPWKELQG MPQK-HSSLT YLDSKVLSPL ENSTTRP00000004146/1-746 KTGLKLGRAF LEVNQPQIHA FASHWKELPR TPQKHHSSLT YLDSNAVYHL bmy_03194T0/1-791 KMGLKLGRAF LEVNKPQIHA FASHWKELPR TPQKHHSSLT YLDSNAVYHL BACU010993/1-697 KMGLKLGRAF PEVNKPQIHA FASRWKELPR TPQKLHSSLT YLDSNAVYHL 401 450 ENSP00000414109/1-748 DEENRFRTLK WLISPVKIVS RPTIRQGHGE NRQREIEIRF DQLHREYCLS ENSBTAP00000040311/1-671 DQENRFVTLK WLISPVKIAS RPRILRGQAG SRFKEIEIKF DKLHQEYCLS ENSTTRP00000004146/1-746 DQENRFMTLN WLISPVKIGS RPRVPPGEGG NRYREIEIRF DKLHQEYCSN bmy_03194T0/1-791 DQENRFMTLK WLISPVKIGS RPRVPPGEGG NRYREIEIRF DKLHQEYCSN BACU010993/1-697 DQENRFMTLK WLISPVKIAS RPRVPPGEGG NRYREIEIRF DKLHQEYCSN 451 500 ENSP00000414109/1-748 PRNQPRRMCL PDSWAMNMYR GGPASPGGLQ GLETRRLSLP SSKAKAKSLS ENSBTAP00000040311/1-671 PGKQLSLTYP PGS-AVDVYR GGPMSPGSPQ GLEAHRLSSP LCKSKAKRLS ENSTTRP00000004146/1-746 LRKQPCLTYL PSSSAVDVYR GGPASPGSPQ GIEAHRPSSP LRRAKAKRLS bmy_03194T0/1-791 LRKQPCLTYL SGSSAVDVYR GGPASPGSPQ GVEAHRPSSP LRRAKAKRLS BACU010993/1-697 LRKQPCLTYL SGSSAVDVYR GGPASPGSPQ GVEAHRPSSP LRRAKGKRLS 501 550 ENSP00000414109/1-748 EAFENLGKRS LEAGRCLPKS DSSSSLPKTN PTHSATRPQQ TSDLHVQGNS ENSBTAP00000040311/1-671 EASEGLGRRS IRVGSCLPES ESFPSLSKTN PTCSAGRPEH TVDLVCL--- ENSTTRP00000004146/1-746 EAFESLGKGS IREGSCPPKS DSFPSLSKTN STCSPGRSEQ TSDLACQGND bmy_03194T0/1-791 EAFESLGERS IREGSCPPKS DSFPSLSKXN STHSPGRSEQ TSDLACQGDD BACU010993/1-697 EAFESLGERS IGEGSCPPKS DSFPSLSKTN STHSPGRSEQ TSDLACQGND 551 600 ENSP00000414109/1-748 SGIFRKSVSP SKTLSVPDKE VPGHGRNRYD EIKEEFDKLH QKYCLKSPGQ ENSBTAP00000040311/1-671 -----ESVSF SKAISVPRVQ PLGFARDRYD DIKEKFDKLH RQYCQKSPQQ ENSTTRP00000004146/1-746 LGGFRKSVSL NKAISVPRVQ PPGCARDRYD DIKEKFDKLH QKYCQKSLQQ bmy_03194T0/1-791 LGGFRKSVSL NKAISXPRVQ PPGCARDRYD DIKEKFDKLH QKYCQKSLQQ BACU010993/1-697 LGGFRKSVSL TKAISVPRVQ PPGCARDRYD DIKEKFDKLH QKYCQKSLQQ 601 650 ENSP00000414109/1-748 MTVPLCIGVS TDKASMEVRY QTEGFLGKLN PDPHFQGFQK LPSSPLGCRK ENSBTAP00000040311/1-671 TQAPS----- -DKARAGVRY QKEGFSVKFN PDSGCRGPPS LSSSPQQSVK ENSTTRP00000004146/1-746 TQVPSGTRAS PDKASVGVRY PKEDFSGKFR PDSGSQGPPS LSSSPQQSIK bmy_03194T0/1-791 TQAPSCTRAS PDKASVGVRY QKEDFLGKFD PDSGSQGPAK LSSSPQQSIK BACU010993/1-697 TQAPSCTRAS PDKASVGVRY QKEDFLGKFD PDSGSQGPPK LSSSPQQSIK 651 700 ENSP00000414109/1-748 SLLGSTAIEA PSSTCVARAI TRDGTRDHQF PAKRPRLSEP QGSGRQGNSL ENSBTAP00000040311/1-671 SPLASNTVGA PPSMDVALAA G----SGHQV PTKRCRLSDP QVCGEGARPW ENSTTRP00000004146/1-746 SPLGSNTIRA PPSTGFALDA S----WGHQV PAKRRRLSDP QVCRRWTGPW bmy_03194T0/1-791 SPLGSNTIGA PPSTGFALHA G----WGHQV PTKRRRLSDP QVCRQWAGPW BACU010993/1-697 SPLGSNTIGA PPSTGFALDA G----WGRQV PTKRRRLSDP Q--------- 701 750 ENSP00000414109/1-748 GASDGVDNTV RPGDQGSSSQ PNSEE----- ---------- ---------- ENSBTAP00000040311/1-671 SFSPVGRAMP RP-------- ---------- ---------- ---------- ENSTTRP00000004146/1-746 DFSPVGRAIP RPGEEAGSVA -TWEEK---- ---------- ---------- bmy_03194T0/1-791 DFSAVGRAIP RPGEEAGSLQ HTWEEKKVRF SSSPHTQNIA VAGKTDLELT BACU010993/1-697 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000414109/1-748 ---------- ---------- ---------- ---------R GENTSYRMEE ENSBTAP00000040311/1-671 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004146/1-746 ---------- ---------- ---------- ---------G KNNTSFRMEE bmy_03194T0/1-791 TLTPSGSLLG TEQESALGEP PAASHTCEGP DHTLLLGPRG KNNTSFRMEE BACU010993/1-697 ---------- ---------- ---------- ---------R KEQTSFRMEE 801 850 ENSP00000414109/1-748 KSDFMLEKLE TKSV------ ------- ENSBTAP00000040311/1-671 ---------- ---------- ------- ENSTTRP00000004146/1-746 KSDFVLENLK AENLL----- ------- bmy_03194T0/1-791 KSDFVLENLK AENLSPSYSE LYRQFLI BACU010993/1-697 KSDFVLENLK AENLSPSYS- -------