KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:31 2014 Check: 00 .. Name: ENSP00000388184/1-614 Len: 1105 Check: 3527 Weight: 1.00 Name: ENSBTAP00000040420/1-630 Len: 1105 Check: 8944 Weight: 1.00 Name: ENSTTRP00000008382/1-615 Len: 1105 Check: 9880 Weight: 1.00 Name: bmy_06801T0/1-1026 Len: 1105 Check: 2223 Weight: 1.00 Name: BACU003122/1-571 Len: 1105 Check: 2366 Weight: 1.00 // 1 50 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 MDSRVSSTTS NGETKPMCPG LEKAEEAGAL QRGQWSNKLE FVLAVAGEII BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 GLGNVWRFPY LCYKNGGGAF FIPYLIFLFT CGIPVFLLET ALGQYTSQGG BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 ITAWRKICPI FEGIGYASQT IVILLNIYYI IVLAWALFYL FSSFTIDLPW BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 GSCRHDWNTE HCVEFQRPSS SVNVSSENAT SPVIEFWERR VLKISDGIQH BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 LGALRWELAL CLLLAWVICY FCIWKGVKST GKVVYFTATF PYLMLVVLLI BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 RGVTLPGAAQ GIQFYLYPNL TRLWDPQVWM DAGTQIFFSF AICLGCLTAL BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 GSYNKYHNNC YRDCLALCFL NSGTSFVAGF AIFSILGFMS QEQGVPISEV BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 AESGPGLAFI AYPRAVVMLP FSPLWACCFF FMIVLLGLDS QFVCVESLVT BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040420/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------- ---------- bmy_06801T0/1-1026 ALVDMYPSVF RKKNRREVLI LGVSVTSFLV GLVMLTEGGM YIFQLFDYYA BACU003122/1-571 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000388184/1-614 ---------- ---------- ---------- ---------- MDGKVAVQEC ENSBTAP00000040420/1-630 ---------- ---------- ----RPAHTH LRPPSPSMAA DDRKLAAPKE ENSTTRP00000008382/1-615 ---------- ---------- ---------- ---------A DDGKVAVPKD bmy_06801T0/1-1026 ASGMCLLFVA IFESLCVAWA YGAGRFYDNI EDMIGPSMAA DDRKVAVPKD BACU003122/1-571 ---------- ---------- ---------- -------MAA DDRKVAVPKD 501 550 ENSP00000388184/1-614 GPPAVSWVPE EGEKLDQEDE DQVKDRGQWT NKMEFVLSVA GEIIGLGNVW ENSBTAP00000040420/1-630 GLPVVPWAPE EGPRPDQEAQ DQVKDRGQWN NKMEFVLSVA GEIIGLGNVW ENSTTRP00000008382/1-615 GPSVVSWVPE EGEKLDQEGK DQVKDRGQWS NKMEFVLSVA GEIIGLGNVW bmy_06801T0/1-1026 GPSVVSWVPE EGEKLDQEGK DQVKERGQWS NKLEFVLSVA GEIIGLGNVW BACU003122/1-571 GPSVVSWVPE EGEKLDQEGK DQVKDRDQWS NKMEFVLSVA GEIIGLGNVW 551 600 ENSP00000388184/1-614 RFPYLCYKNG GGAFFIPYFI FFFVCGIPVF FLEVALGQYT SQGSVTAWRK ENSBTAP00000040420/1-630 RFPYLCYKNG GGAFFIPYFI FFFSCGIPVF FLEVALGQYT SQGSVTAWRK ENSTTRP00000008382/1-615 RFPYLCYKNG GGAFFFPYFI FFFTCGIPVF FLEVALGQYT SQGSVTAWRK bmy_06801T0/1-1026 RFPYLCYKNG GGAFFFPYFI FFFTCGIPVF FLEVALGQYT SQGSVTAWRK BACU003122/1-571 RFPYLCYKNG GGAFFFPYFI FFFTCGIPVF FLEVALGQYT SQGSVTAWRK 601 650 ENSP00000388184/1-614 ICPLFQGIGL ASVVIESYLN VYYIIILAWA LFYLFSSFTS ELPWTTCNNF ENSBTAP00000040420/1-630 ICPLLQGIGL ASVVIEAYLN IYYIIILAWA LFYLFSSFTS ELPWTTCAHS ENSTTRP00000008382/1-615 ICPLLQGIGL ASVVIEAYLN VYYIIILSWA LFYLFSSFTS ELPWTACTHS bmy_06801T0/1-1026 ICPLLQGIGL ASVVIEAYLN VYYIIILAWA LFYLFSSFTS ELPWTACTHS BACU003122/1-571 ICPLLQGIGL ASVVIEAYLN VYYIIILSWA LFYLFSSFTS ELPWTACTHS 651 700 ENSP00000388184/1-614 WNTEHCTDFL NHSGAGTVTP FENFTSPVME FWERRVLGIT SGIHDLGSLR ENSBTAP00000040420/1-630 WNTEHCMDFL NHSTAGTTGP SENVTSPVME FWERRVLSIS PGIQHLGGLR ENSTTRP00000008382/1-615 WNTEHCMDFP NRSAAGAAAP PVNFTSPVME FWERRVLGIS SGIHDLGALR bmy_06801T0/1-1026 WNTEDCVDFL NRSAASAAAP PVNFTSPVME FWERRVLGIS SGIHELGALR BACU003122/1-571 WNTEGCVDFL IRSAASAAAP PVNFTSPVME FWERRVLGLS SGIHELGALR 701 750 ENSP00000388184/1-614 WELALCLLLA WVICYFCIWK GVKSTGKVVY FTATFPYLML VILLIRGVTL ENSBTAP00000040420/1-630 WELALCLLLA WIICYFCIWK GVKITGKVVY FTATFPYLML VILLVRGVTL ENSTTRP00000008382/1-615 WELALCLLLA WVVCYFCIWK GVKSTGKVVY FTATFPYLML VILLIRGITL bmy_06801T0/1-1026 WELALCLLLA WVVCYFCIWK GVKSTGKVVY FTATFPYLML VILLIRGITL BACU003122/1-571 WELALCLLLA WVVCYFCIWK GVKSTGKVVY FTATFPYLML VILLIRGVTL 751 800 ENSP00000388184/1-614 PGAYQGIIYY LKPDLFRLKD PQVWMDAGTQ IFFSFAICQG CLTALGSYNK ENSBTAP00000040420/1-630 PGAYEGIIYY LKPDLLRLKD PQVWMDAGTQ IFFSFAICQG CLTALGSYNK ENSTTRP00000008382/1-615 PGAYEGIIYY LKPDLLRLKD PQXXXXXXXX XXXXXXXXXX XXXXXGSYNK bmy_06801T0/1-1026 PGAYEGIIYY LKPDLLRLKD PQVWMDAGTQ IFFSFAICQG CLTALGSYNK BACU003122/1-571 PGAYEGIIYY LKPDLLRLKD PQVWMDAGTQ IFFSFAICLG CLTALGSYNK 801 850 ENSP00000388184/1-614 YHNNCYKDCI ALCFLNSATS FVAGFVVFSI LGFMSQEQGV PISEVAESGP ENSBTAP00000040420/1-630 YHNNCYRDSI ALCFLNSGTS FVAGFVVFSI LGFMSREQGV PISEVAESGP ENSTTRP00000008382/1-615 YHNNCYRDSI ALCFLNSATS FVAGFVVFSI LGFMSQEQGV PISEVAESGP bmy_06801T0/1-1026 YHNNCYRDSI ALCFLNSATS FVAGFVVFSI LGFMSQEQGV PISEVAESAP BACU003122/1-571 YHNNCYRDSI ALCFLNSATS FVAGFVVFSI LGFMSQEQGV PISEVAESGP 851 900 ENSP00000388184/1-614 -GLAFIAFPK AVTMMPLSQL WSCLFFIMLI FLGLDSQFVC VECLVTASID ENSBTAP00000040420/1-630 -GLAFIAFPK AVTMMPLSQL WSCLFFIMLI FLGLDSQFVC MECLVTASMD ENSTTRP00000008382/1-615 -GLAFIAFPK AVSMMPLSQL WSCLFFIMLI FLGLDSQFVC VECLVTASVD bmy_06801T0/1-1026 SGPQFV---- ---------- ---------- ---------C VECLVTASVD BACU003122/1-571 -GLAFI---- ---------- ---------- ---------A ---------- 901 950 ENSP00000388184/1-614 MFPRQLRKSG RRELLILTIA VMCYLIGLFL VTEGGMYIFQ LFDYYASSGI ENSBTAP00000040420/1-630 MFPRQLRRSG RRELLILAIS VTCCLIGLFL VTEGGMYLFQ LFDYYACSGT ENSTTRP00000008382/1-615 MFPRQLRKSG RRELLILAIV VLCYLIGLFL VTEGGMYIFQ LFDYYACSGT bmy_06801T0/1-1026 MFPRQLRKSG RRELLILAIA VMCYLIGLFL VTEGGMYIFQ LFDYYACSGT BACU003122/1-571 -FPKAVSMMP LSQLCSCLFF IMLIFLG--L DSQGGMYIFQ LFDYYACSGT 951 1000 ENSP00000388184/1-614 CLLFLSLFEV VCISWVYGAD RFYDNIEDMI GYRPWPLVKI SWLFLTPGLC ENSBTAP00000040420/1-630 CLLFLSVFEV ICVGWVYGAD RFYDNVADMI GYRPWPLVKI SWLFLTPGLC ENSTTRP00000008382/1-615 CLLFLSVFEV ICIGWVYGAD RFYDNVEDMI GYRPWPLVKI SWLFLTPGLC bmy_06801T0/1-1026 CLLFLSVFEV ICIGWVYGAD RFYDNMEDMF GYRPWPLVKI SWLFLTPGLC BACU003122/1-571 CLLFLSVFEV ICIGWVYGAD RFYDNMEDMF GYRPWPLVKI SWLFLTPGLC 1001 1050 ENSP00000388184/1-614 LATFLFSLSK YTPLKYNNVY VYPPWGYSIG WFLALSSMVC VPLFVVITLL ENSBTAP00000040420/1-630 LATFFFSLSK YTPLKYNNVY VYPAWGYFIG WFLAGSSMGC VPLFIIVTLL ENSTTRP00000008382/1-615 LATFLFSLSK YTPLRYNNVY VYPAWGYFIG WLLAGSSMSC VPLFVVVALL bmy_06801T0/1-1026 LATFLFSLSK YTPLRYNNVY VYPAWGYFIG WLLAGSSMGC VPLFIVVALL BACU003122/1-571 LATFLFSLSK YTPLRYNNVY VYPAWGYFIG WFLAGSSMGC VPLFIAVALL 1051 1100 ENSP00000388184/1-614 KTRGPFRKRL RQLITPDSSL PQPKQHPCLD GSAGRNFGPS PTREGLIAGE ENSBTAP00000040420/1-630 KTRGSFKKRL RQLVTPDPSL PQPKRHLCLD GGSSRDCGPT PLKEGLMAGE ENSTTRP00000008382/1-615 KTQGSFRKRL RQLVTPDPSL PQPKRHLCLD GGSSQDCGPS PTKAGLMAGE bmy_06801T0/1-1026 KTQGSFKKG- ---------- ---------- ---------- ---------- BACU003122/1-571 KAQGSFKKRL RQLVTPDPSL PQPKRYLCLD GGSSQDCGPS PTKAGLMAGE 1101 1150 ENSP00000388184/1-614 KETHL ENSBTAP00000040420/1-630 KETHL ENSTTRP00000008382/1-615 KETHL bmy_06801T0/1-1026 ----- BACU003122/1-571 KETHL