KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:32 2014 Check: 00 .. Name: ENSTTRP00000011125/1-755 Len: 769 Check: 2534 Weight: 1.00 Name: ENSP00000253799/1-756 Len: 769 Check: 7890 Weight: 1.00 Name: ENSBTAP00000040444/1-756 Len: 769 Check: 6993 Weight: 1.00 Name: bmy_15643T0/1-769 Len: 769 Check: 763 Weight: 1.00 Name: BACU007103/1-756 Len: 769 Check: 9639 Weight: 1.00 // 1 50 ENSTTRP00000011125/1-755 MNLKVVLVFL ALSLITVFAL AYVLLTSQRS SSQPPHCPSV SYSAQPWTHP ENSP00000253799/1-756 MHLKIVLAFL ALSLITIFAL AYVLLTSPGG SSQPPHCPSV SHRAQPWPHP ENSBTAP00000040444/1-756 MNLKVVLVFL ALSLITIFAL AYVLLTSRGG SSLPPRCPSV SPRAQPWTHP bmy_15643T0/1-769 MNLKVVLVFL ALSLITVFAL AYVLLTSQGS SSQPPRCPSV SYSAQPWTHR BACU007103/1-756 MNLKVVLVFL ALSVITVFAL AYVLLTSQGS SSQPPRCPSV SYSAQPWTHP 51 100 ENSTTRP00000011125/1-755 GQSRLFADLN L-ELTAVMSF LTLKLGPGLV DAAQAQPSDN CVFSVELELP ENSP00000253799/1-756 GQSQLFADLS REELTAVMRF LTQRLGPGLV DAAQAQPSDN CIFSVELQLP ENSBTAP00000040444/1-756 GQSQLFADLS REELMAVMSF LTQKLGPDLA DAAQARPSDN CIFSVELQLP bmy_15643T0/1-769 GQSRLFADLS REELTAVMSF LTQKLGPGLV DAAQAHPFDN CVFSVELQLP BACU007103/1-756 GQSQLFADLS REELTAVMSF LTQKLGPGLV DAAQAHPFDN CVFSVELQLP 101 150 ENSTTRP00000011125/1-755 PKAAALAHLD RGSPPPAREA LAIVFFGGQP QPNVTELLVG PLPHPSYLRD ENSP00000253799/1-756 PKAAALAHLD RGSPPPAREA LAIVLFGGQP QPNVSELVVG PLPHPSYMRD ENSBTAP00000040444/1-756 PKAAALAHLD RGRPPPAREA LAIVFFGRQP QPNVTELVVG PLPQPSYMRD bmy_15643T0/1-769 PKAAALACLD RGSPPPAREA LAIVFFGGQP QPNVTELVVG PLPHPSYLRD BACU007103/1-756 PKAAALAYLD RGSPPPAREA LAIVFFGGQP QPNVTELVVG PLPHPSYLRD 151 200 ENSTTRP00000011125/1-755 VTVERHGGPL PYXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 VTVERHGGPL PYHRRPVLRA EFTQMWRHLK EVELPKAPIF LSSTFNYNGS ENSBTAP00000040444/1-756 VTVERHGGPL PYHRRPVLAT ESAQMWMHLK KVEFPKAPVF LASVFNYNGS bmy_15643T0/1-769 VTVERHGGPL PYHRRPVLGT ESAQMWKHLK EVELPKAPVF LASVFNYSGS BACU007103/1-756 VTVERHGGPL PYHRRPVLGT ESAQMWKHLK EVELPKAPVF LASVFNYSGS 201 250 ENSTTRP00000011125/1-755 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 TLAAVHATPR GLRSGDRATW MALYHNISGV GLFLHPVGLE LLLDHRALDP ENSBTAP00000040444/1-756 TLAALHATPR GLRSGDRATW IALYHNISGV GIFLHPVGLE LLLDHRALDP bmy_15643T0/1-769 TLAALHATPR GLRSGDRATW IALYHNISGV GIFLHPVGLE LLLDHRALDP BACU007103/1-756 TLAALHATPR GLRSGDRATW IALYHNISGV GIFLHPVGLE LLLDHRALDP 251 300 ENSTTRP00000011125/1-755 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 AHWTVQQVFY LGHYYADLGQ LEREFKSGRL EVVRVPLPPP NGASSLRSRN ENSBTAP00000040444/1-756 AHWAVQQVFY LGHYYSDLGQ LEWEFKAGRL DVVRVPLPLP DGASSLRSRV bmy_15643T0/1-769 ARWAVQQVFY LGHYYADLGQ LEWEFKAGRL EVVRVPLPLP VGASSLRSRV BACU007103/1-756 ARWAVQQVFY LGRYYADLGQ LEWEFKAGRL EAVRVPLPLP VGASSLRSRV 301 350 ENSTTRP00000011125/1-755 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 SPGPLPPLQF SPQGSQYSVQ GNLVVSSLWS FTFGHGVFSG LRIFDVRFQG ENSBTAP00000040444/1-756 SPGPLPPLEF SPQGSRYSVQ GHLVESFLWT FTFGHGAFSG MRIFDVRFKG bmy_15643T0/1-769 SPGPLPPLQF SPQGSRYSVQ GNLVASSLWT FTFGHGVFSG MRIFDVRFKG BACU007103/1-756 SPGPLPPLQF SPQGSRYSVQ GNLVASSLWT FTFGHGVFSG MRIFDVRFKG 351 400 ENSTTRP00000011125/1-755 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 ERIAYEVSVQ ECVSIYGADS PKTMLTRYLD SSFGLGRNSR GLVRGVDCPY ENSBTAP00000040444/1-756 ERVAYEVSVQ ECLSVYGADS PKTMMTRYLD SSYGLGRHSR GLVRGVDCPY bmy_15643T0/1-769 ERVAYEVSVQ ECVSIYGADS PKTMMTRYLD SSYGLGHHSR GLVRGVDCPY BACU007103/1-756 ERVAYEVSVQ ECVSVYGADS PKTMMTRYLD SSYGLGLHSR GLVRGVDCPY 401 450 ENSTTRP00000011125/1-755 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253799/1-756 QATMVDIHIL VGKGAVQLLP GAVCVFEEAQ GLPLRRHHNY LQNHFYGGLA ENSBTAP00000040444/1-756 QSTMVDTHVL VGQGAVQLLP GAVCVFEEAQ GLPLRRHHNQ LQSHFYGGLA bmy_15643T0/1-769 QSTMVDIHVL VGKGAVQLLP GAVCVFEEAQ GLPLRRHHNH LQSHFYGGLA BACU007103/1-756 QSTMVDIHVL VGKGAVQLLP GAVCVFEEAQ GLPLRRHHNH LQSHFYGGLA 451 500 ENSTTRP00000011125/1-755 XXXXXXXXXX XXGNYDYIWD FVLHPNGALE GRVHATGYIN TAFLSGGEES ENSP00000253799/1-756 SSALVVRSVS SVGNYDYIWD FVLYPNGALE GRVHATGYIN TAFLKGGEEG ENSBTAP00000040444/1-756 GSALVVRSVS SVGNYDYIWD FVLHPNGALE GRVHATGYIN TAFLSGGEES bmy_15643T0/1-769 GSALVVRSVS SVGNYDYIWD FVLHPNGALE GRVHATGYIN TAFLSGGEES BACU007103/1-756 GSVLVVRSVS SVGNYDYIWD FVLHPNGALE GRVHATGYIN TAFLSGGEES 501 550 ENSTTRP00000011125/1-755 LLFGNRVGER VLGAVHTHAF HFKLDLDVAG LKNWVVAEDV VFKPVAAPWS ENSP00000253799/1-756 LLFGNRVGER VLGTVHTHAF HFKLDLDVAG LKNWVVAEDV VFKPVAAPWN ENSBTAP00000040444/1-756 LLFGNRVGER VLGAVHTHAF HFKLDLDVAG LKNWVVAEDV VFKPVAAPWS bmy_15643T0/1-769 LLFGNRVGEQ VLGAVHTHAF HFKLDLDVAG LKNWVVAEDV VFKPVAAPWS BACU007103/1-756 LLFGNRVGER VLGAVHTHAF HFKLDLDVAG LKNWVVAEDV VFKPVAAPWS 551 600 ENSTTRP00000011125/1-755 PEHQLQRPQL TRQVLGREDL TAFFLGDPLP RYLYLASNQT NSWGHQRGYR ENSP00000253799/1-756 PEHWLQRPQL TRQVLGKEDL TAFSLGSPLP RYLYLASNQT NAWGHQRGYR ENSBTAP00000040444/1-756 PEHQLQRPQL TRQVLGREDL TAFFLGSPLP RYLYLASNQT NAWGHQRGYR bmy_15643T0/1-769 PEHQLQRPQL TRQVLGREDL TAFFLGNPLP RYLYLASNQT NSWGHQRGYR BACU007103/1-756 PEHQLQRPQL TRQVLGREDL TAFFLGNPLP RYLYLASNQT NSWGHQRGYR 601 650 ENSTTRP00000011125/1-755 IQIHSPLGIH MPLDSDMERA LSWGRYQLVV TRRKEEESQS SSIYYQNDIW ENSP00000253799/1-756 IQIHSPLGIH IPLESDMERA LSWGRYQLVV TQRKEEESQS SSIYHQNDIW ENSBTAP00000040444/1-756 IQIHSPLGIH MPLDSTMERA LSWGRYQLAV TRRKEEESQS SSIYYQNDIW bmy_15643T0/1-769 IQIHSPLGIH MPLDSDMERA LSWGRYQLVV TRRKEEESQS SSIYYQNDIW BACU007103/1-756 IQIHSPLGIH MPLDSDMERA LSWGRYQLVV TRRKEEESQS SSIYYQNDIW 651 700 ENSTTRP00000011125/1-755 TPTAAFADFI NNETLLGEDL VAWVTASFLH IPHAEDVPNT VTLGNRVGFL ENSP00000253799/1-756 TPTVTFADFI NNETLLGEDL VAWVTASFLH IPHAEDIPNT VTLGNRVGFL ENSBTAP00000040444/1-756 TATAAFADFI NNETLLGEDL VAWVTTSFLH IPHAEDVPNT VTLGNRVGFL bmy_15643T0/1-769 TPTTAFADFI NNETLLGEDL VAWVTASFLH IPHAEDVPNT VTLGNRVGFL BACU007103/1-756 TPTTAFADFI NNETLLGEDL VAWVTASFLH IPHAEDVPNT VTLGNRVGFL 701 750 ENSTTRP00000011125/1-755 LRPYNFFDED PSIFSPGSVY FEKGQDAGLC SVNHVACIPH LAACVPDLPP ENSP00000253799/1-756 LRPYNFFDED PSIFSPGSVY FEKGQDAGLC SINPVACLPD LAACVPDLPP ENSBTAP00000040444/1-756 LRPYNFFDED PSIFSPGSVY FEKGQDAGLC SVNHVACIPH LAACVPDLPP bmy_15643T0/1-769 LRPYNFFDED PSIFSPGSVY FEKGQDAGLC SVNHVACIPH LAACVPDLPP BACU007103/1-756 LRPYNFFDED PSIFSPGSVY FEKGQDAGLC SVNHAACIPH LAACVPNLPP 751 800 ENSTTRP00000011125/1-755 FSYQDL---- --------- ENSP00000253799/1-756 FSYHGF---- --------- ENSBTAP00000040444/1-756 FSYQDL---- --------- bmy_15643T0/1-769 FSYQDFLHCV GILRTSARV BACU007103/1-756 FSYQDL---- ---------