KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:32 2014 Check: 00 .. Name: ENSP00000360829/1-276 Len: 322 Check: 7618 Weight: 1.00 Name: ENSBTAP00000040449/1-320 Len: 322 Check: 1710 Weight: 1.00 Name: bmy_20941T0/1-243 Len: 322 Check: 385 Weight: 1.00 Name: BACU016150/1-278 Len: 322 Check: 6938 Weight: 1.00 // 1 50 ENSP00000360829/1-276 MNSKRMLLLV LFAFS-LMLV ERYFRN---- --------HQ VEELRLSDWF ENSBTAP00000040449/1-320 MNCKRKMLLL ILGLSLLLLF DHYSSSVSHG EKLLCCLKNQ EEELELSDWF bmy_20941T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU016150/1-278 MNSKRKMLLS ILCLSSLMLL ERYFRN---- --------SQ VEELQLSNWF 51 100 ENSP00000360829/1-276 HP-RKRPDVI TKTDWLAPVL WEGTFDRRVL EKHYRRRNIT VGLAVFATGR ENSBTAP00000040449/1-320 KP-RGRPDVI TTTSWLAPVV WEGTFSRKML EKHYRRQNFT TGLAVFATGR bmy_20941T0/1-243 ---------- ---------- ---------M EKHYRKKNLT LGLAVFAIGR BACU016150/1-278 NPSRKRPDVI TATNCLAPIV WEGTFSRQVL EKHYRKKNLP LGLAVFAIGR 101 150 ENSP00000360829/1-276 FAEEYLRPFL HSANKHFMTG YRVIFYIMVD AFFKLPDIEP SPLRTFKAFK ENSBTAP00000040449/1-320 LADPYLELFL NSANKYFLTG YRVIFYIMMD TFIKLPQIKW EPLRQFKVFI bmy_20941T0/1-243 FSDQYLELFL RSADKYFMTG YRVVFYIMVD TLSRLPQLER GPLRQFKVFT BACU016150/1-278 FAEQYLELFL HSA------- --------VQ SVYR----HR GQL------- 151 200 ENSP00000360829/1-276 VGTERWWLDG PLVHVKSLGE HIASHIQDEV DFLFSMAANQ VFQNEFGVET ENSBTAP00000040449/1-320 VTESRWW-DN DVVRMKSLAK HIIWDIQGEV DFLFSMTVTQ IFQNNVGVEV bmy_20941T0/1-243 VTEDSWPDDV HLMRMKSLGK HIIQDIQGEV DFLFSMTITQ ILQNDVGVEV BACU016150/1-278 --AGRCPPDA Y----EELGQ AHRPDIQGEV DFLFSMTVTQ ILQNDVGVEV 201 250 ENSP00000360829/1-276 LGPLVAQLHA WWYFRNTKNF PYERRPTSAA CIPFGQGDFY YGNLMVGGTP ENSBTAP00000040449/1-320 LGELVAQLHG WWYFKDRASF PYERRPKSAA YIPFGQGDFY YDGAFVGGTP bmy_20941T0/1-243 LGMSVAQLHA WWYSKNPGSF PYERRPKSAA CILFGQGDFY YDGVFVGGPP BACU016150/1-278 LGTSVAQLHA WWYFKNPGSF PYERRPKSAA CIPFGQGDFY YDGAFVGGTP 251 300 ENSP00000360829/1-276 HNILDFIKEY LNGVIHDIKN GLNSTYEKHL NKYFYLNKPT ---------- ENSBTAP00000040449/1-320 QEVLNLAEEY LNGVIHDLGL RLNSSYEKHL NKYFFLRKPT KLLSPEYNWD bmy_20941T0/1-243 LEILNLFEEY LKSVIHDLKL GLNSTYEKYL NKYFFLRKPT KLLSPEYNWD BACU016150/1-278 LEILNLVEEY LKSVIHDLKL GLNSTYEKYL NKYFFLRKPT KLLSPEYNWD 301 350 ENSP00000360829/1-276 ---------- ---------- -- ENSBTAP00000040449/1-320 ADFYPPPQVQ YVKVAQQSKR RH bmy_20941T0/1-243 SEFYPPPQVQ YVKVAQQSKR RF BACU016150/1-278 AEFYPPPQVQ YVKVAQQSKR RF