KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:50:32 2014 Check: 00 ..
Name: bmy_10535T0/1-196 Len: 375 Check: 2887 Weight: 1.00
Name: ENSP00000347586/1-296 Len: 375 Check: 3084 Weight: 1.00
Name: ENSTTRP00000000468/1-296 Len: 375 Check: 8677 Weight: 1.00
Name: ENSBTAP00000040454/1-294 Len: 375 Check: 4272 Weight: 1.00
Name: BACU013097/1-326 Len: 375 Check: 7659 Weight: 1.00
//
1 50
bmy_10535T0/1-196 ---------- ---------- ---------- ---------- ----------
ENSP00000347586/1-296 MGCRHSRLSS CKPPKKKRQE PEPEQPPRPE PHELGPLNGD TAITVQLCAS
ENSTTRP00000000468/1-296 MGCGDSRLSC CKPPKKXXXX XXXXXXXXXX XXXXXXXXXX XXTTVHLCTS
ENSBTAP00000040454/1-294 MGCGHSRLSC CKPPKKRRQ- -RPDQPPKPE PQELGPLNGD TATTDHVCAS
BACU013097/1-326 MGCGHSRLSC CKPPKKRCQ- -GPDQPPKPE LQELGPLNGD TATAAHLCAS
51 100
bmy_10535T0/1-196 ---------- ---------- ---------- ---------- ----------
ENSP00000347586/1-296 EEAERHQKDI TRILQQHEEE KKKWAQQVEK ERELELRDRL DEQQRVLEGK
ENSTTRP00000000468/1-296 EEAGQHQKAL TRILQQHEED KKKWAQKVEK ERELELGEKL NEQRRVLEGE
ENSBTAP00000040454/1-294 EEAEQHQKAI TRILQQHEED KKKWAQQVEK ERELELGEKL NEQRKVLEGE
BACU013097/1-326 EEAEQHQKSV TRILQQHEED KKKWAQKVEK ERELELGEKL NEQRRVLEAE
101 150
bmy_10535T0/1-196 ---------- ---------- ---------- ---------- -------MKR
ENSP00000347586/1-296 NEEALQVLRA SYEQEKEALT HSFREASSTQ QETIDRLTSQ LEAFQAKMKR
ENSTTRP00000000468/1-296 HAEALRVLQA SHEQDKEALT RSFQEAKAAL QETTDRLTAQ LEAFQAKVKR
ENSBTAP00000040454/1-294 HAEALRVLQA SYEQDKEALT HSFQEAKAAL QETIDRLTAQ IEAFQAKMKR
BACU013097/1-326 HAEALRVLQA SHEQDKEALT HSFQEAKAAL QETTDRLTAQ REAFQAKMKR
151 200
bmy_10535T0/1-196 VEESILSQDY KKHIQEYGSP SXFWEQELES LHFVIEMKNE RIHELDKRLI
ENSP00000347586/1-296 VEESILSRNY KKHIQDYGSP SQFWEQELES LHFVIEMKNE RIHELDRRLI
ENSTTRP00000000468/1-296 VEESILSQDY KKHIQEYGSP SQLWEQELES LHFVIEMKNE RIHELDKRLI
ENSBTAP00000040454/1-294 AEESILSRDY KKHIQEHGSL SQFWEQELES LHFVIEMKNE RIHELDKRLI
BACU013097/1-326 VEESILSQDY KKHIQEYGSP SQFWEQELES LHFVIEMKNE RIHELDKRLI
201 250
bmy_10535T0/1-196 LMETV----- ---------- ---------- -------KEK SLLLEEKITT
ENSP00000347586/1-296 LMETV----- ---------- ---------- -------KEK NLILEEKITT
ENSTTRP00000000468/1-296 LMETV----- ---------- ---------- -------KEK NLLLEEKITT
ENSBTAP00000040454/1-294 LMETV----- ---------- ---------- -------KEK NLLLEEKITT
BACU013097/1-326 LMETVVRGWQ RLVGDGGGGQ LMLLLSGHFL CQVCPGKKEK NLLLEEKITT
251 300
bmy_10535T0/1-196 LQQENEDLHA RGRNQTAVSR WRPRGAVPRR QPRALSVSTG SSLRTCFSPE
ENSP00000347586/1-296 LQQENEDLHV RSRNQVVLSR QLSEDLLLTR E----ALEKE VQLRRQLQQE
ENSTTRP00000000468/1-296 LQQENEDLHA RGRNQMAVSR QLSEDLLLAR E----ALEKE SQLCQQLQQE
ENSBTAP00000040454/1-294 LQQENEDLHA RGRNQMVVSR QLSEDLLLAR E----ALEKE SQSRRQLQQE
BACU013097/1-326 LQQENEDLHA RGRNQVAVSR QLSEDLLLAR E----ALEKE SQLRRQLQQE
301 350
bmy_10535T0/1-196 RPWRRSRSYA GSSSRRRRSC CTGSSGPTPP PPSRWPLSPP LRSPSSPHRA
ENSP00000347586/1-296 KEELLYRVLG ANAS------ ---------- --PAFPLAP- ----------
ENSTTRP00000000468/1-296 KEQLLYRVLG ADAS------ ---------- --PAFPLAS- ----------
ENSBTAP00000040454/1-294 KEELLYRVLG ADAA------ ---------- --PAFPLAS- ----------
BACU013097/1-326 KEELLYRVLG ADAS------ ---------- --PAFPLAS- ----------
351 400
bmy_10535T0/1-196 WTAGMLWSQL SLEDLAEKTA GASCP
ENSP00000347586/1-296 ---------- ----VTPTEV SFLAT
ENSTTRP00000000468/1-296 ---------- ----LTPTEV SYLAT
ENSBTAP00000040454/1-294 ---------- ----VTPTEV SFLAT
BACU013097/1-326 ---------- ----LTPTEV SFLAT