KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:35 2014 Check: 00 .. Name: ENSBTAP00000040493/1-494 Len: 494 Check: 1605 Weight: 1.00 Name: ENSTTRP00000000711/1-494 Len: 494 Check: 1632 Weight: 1.00 Name: bmy_05547T0/1-454 Len: 494 Check: 6403 Weight: 1.00 Name: BACU017025/1-449 Len: 494 Check: 2802 Weight: 1.00 // 1 50 ENSBTAP00000040493/1-494 MGTTKVTAPL IFAISVATIG SFQFGYNTGV INAPEAIIKD FLNYTLEERS ENSTTRP00000000711/1-494 MGTTKVTAPL IFAITIATIG SFQFGYNTGV INAPEEIIKD YLNYTLQERF bmy_05547T0/1-454 MGTAKVTAPL IFAITIATIG SFQFGYNTGV INAPEVIIKD FLNYTLQERL BACU017025/1-449 MGTAKVTAPL IFAITIATIG SFQFGYNTGV INAPEVIIKD FLNYTLQERL 51 100 ENSBTAP00000040493/1-494 EPPPSSVLLT SLWSLSVAIF SVGGMIGSFS VGLFVNRFGR RNSMLIVNLL ENSTTRP00000000711/1-494 KNPPSEVVLT SLWSLSVAIF SVGGMVGSFS VGLFVNRFGR RNSMLIVNLL bmy_05547T0/1-454 ENPPSEVLLT SLWSLSVAIF SVG------- ---------- ---------- BACU017025/1-449 KNPPSEVLLT SLWSLSVAIF SVGGMIGSFS VGLFVNRFGR RNSMLIVNLL 101 150 ENSBTAP00000040493/1-494 AIAGGCLMGF CKIAESVEML ILGRLIIGLF CGLCTGFVPM YIGEISPTAL ENSTTRP00000000711/1-494 AIAGGCLMGF CKIAESFEML ILGRLVIGLF CGLCTGFVPM YIGEISPTAL bmy_05547T0/1-454 ---------- ---AESVEML ILGRLVIGLF CGLCTGFVPM YIGEISPTAL BACU017025/1-449 AIAGGCLMGF CKIAESVEML ILGRLVIGLF CGLCTGFVPM YIGEISPTAL 151 200 ENSBTAP00000040493/1-494 RGAFGTLNQL GIVIGILVAQ IFGLKVILGT EDLWPLLLGF TILPAIIQCA ENSTTRP00000000711/1-494 RGAFGTLNQL GIVIGILVAQ IFGLKNILGT KELWPLLLGF TIIPAILQCA bmy_05547T0/1-454 RGAFGTLNQL GIVIGILVAQ IFGLKIILGT KELWPLLLGF TIIPAILQCA BACU017025/1-449 RGAFGTLNQL GIVIGILVAQ IFGLNIILGT KELWPLLLGF TIIPAILQCA 201 250 ENSBTAP00000040493/1-494 ALPFCPESPR FLLINRKEEE KAKEILQRLW GTEDVAQDIQ EMKDESMRMS ENSTTRP00000000711/1-494 ALPFCPESPR FLLINRKEEE SAKEILQRLW GNKDVAQDIQ EMKDESIRMA bmy_05547T0/1-454 SLPFCPESPR FLLINRKEEE SAKEILQRLW GTQDVAQDIQ EMKDESIRMA BACU017025/1-449 SLPFCPESPR FLLINRKEEE SAKE------ ---------- ---------- 251 300 ENSBTAP00000040493/1-494 QEKQVTVLEL FRAPNYRQPI IISIMLQLSQ QLSGINAVFY YSTGIFKDAG ENSTTRP00000000711/1-494 QEKKVSVVEL FRAPSYRQPI LISIMLQLSQ QLSGINAVFY YSTGIFQDAG bmy_05547T0/1-454 QEKKVTVVEL FRAPNYRQPI IISIMLQLSQ QLSGINAVFY YSTGIFKDAG BACU017025/1-449 ---------- ---------I SISIMLQLSQ QLSGINAVFY YSTGIFKDAG 301 350 ENSBTAP00000040493/1-494 VQEPVYATIG AGVVNTIFTV VSVFLVERAG RRTLHLIGLG GMAFCSILMT ENSTTRP00000000711/1-494 VKEPIYATIG AGVVNTIFTV VSVFLVEKAG RRTLHLIGLG GMAFCSVLMT bmy_05547T0/1-454 VKEPIYATIG AGVVNTIFTV VSVFLAEKAG RRTLHLIGLG GMAFCSVLMT BACU017025/1-449 VKEPIYATIG AGVVNTIFTV VSVFLVEKAG RRTLHLIGLG GMAFCSILMT 351 400 ENSBTAP00000040493/1-494 ISLLLKDNYS WMSFICIGAI LVFVAFFEIG PGPIPWFIVA ELFGQGPRPA ENSTTRP00000000711/1-494 ISLLLKDNYG WMSFICIGAI LLFVAFFEIG PGPIPWFIVA ELFSQGPRPA bmy_05547T0/1-454 ISLLLKDNYG WMSFICIGAI LAFVAFFEIG PGPIPWFIVA ELFGQGPRPA BACU017025/1-449 ISLLLKDNYG WMSFICIGAI LAFVAFFEIG PGPIPWFIVA ELFGQGPRPA 401 450 ENSBTAP00000040493/1-494 AMAVAGCSNW TSNFLVGLLF PSAAFYLGAY VFIVFTVFLV IFWVFTFFKV ENSTTRP00000000711/1-494 AMAVAGCSNW TSNFLVGLLF PSAAFYLGAY VFIIFTGFLV IFWVFTFFKV bmy_05547T0/1-454 AMAVAGCSNW TSNFLVGLLF PSAAFYLGAY VFIVFTGFLV IFWIFTFFKV BACU017025/1-449 AMAVAGCSNW TSNFLVGLLF PSAAFYLGAY VFIVFTGFLV IFWIFTFFKV 451 500 ENSBTAP00000040493/1-494 PETRGRTFEE ITRAFEGQTQ TGTRGEKGPI MEMNSIQPTK DTNA ENSTTRP00000000711/1-494 PETRGRTFEE ITRAFEGPVP AGNRGEKGPI VEMNSIQPTK DTNV bmy_05547T0/1-454 PETRGRTFEE ITRAFEGQVP AGNRGEKGPI VEMNSIQPTK DTNV BACU017025/1-449 PETRGRTFEE ITRAFEGQVP AGNRGEKGPI VEMNSIQPTK DTNV