KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:36 2014 Check: 00 .. Name: ENSP00000361232/1-851 Len: 865 Check: 4593 Weight: 1.00 Name: ENSBTAP00000040521/1-736 Len: 865 Check: 645 Weight: 1.00 Name: ENSTTRP00000013365/1-826 Len: 865 Check: 1069 Weight: 1.00 Name: bmy_05373T0/1-654 Len: 865 Check: 442 Weight: 1.00 Name: BACU016191/1-733 Len: 865 Check: 9713 Weight: 1.00 // 1 50 ENSP00000361232/1-851 MAPDLASQRH SESFPSVNSR PNVILPGREG RREGLPPGGG TRGSLVPTRP ENSBTAP00000040521/1-736 ---------- ---------- ---------- --------MA AVSGVLPQVP ENSTTRP00000013365/1-826 ---------- ---------- ---RLHGMNC GLSVIWPSHG RQTGPPPRPG bmy_05373T0/1-654 ---------- ---------- ---------- ---------- ---------- BACU016191/1-733 ---------- ---------- ---------- --------MA AADGVLPHVP 51 100 ENSP00000361232/1-851 VPPSPAPLGT SPYSWSRSGP GRGGGA---G SSRVPRGVPG PAVCAPGSLL ENSBTAP00000040521/1-736 EPRAAV---- ---------- ---------- ---------- ---------- ENSTTRP00000013365/1-826 APRGSISRGA GPLFALFGPE GRGRRTRRGS YAGSSRVSRG VLVREVGSLQ bmy_05373T0/1-654 ---------- ---------- ---------- ---------- ---------- BACU016191/1-733 ESRAAV---- ---------- ---------- ---------- ---------- 101 150 ENSP00000361232/1-851 HHASPTQTMA AADGSLFDNP RTFSRRPPAQ ASRQAKATKR KYQASSEAPP ENSBTAP00000040521/1-736 ---------- ---------F RTFSKPRPAH ARRQAAATKR KCQASSEAPP ENSTTRP00000013365/1-826 QPTEPTNMGN SPCSRVPGRP TTSSRPRPAQ SRRQAAATKR KYQASSETPP bmy_05373T0/1-654 ---------- ---------- ---------- MMQQAAATXR KYRASSEAPP BACU016191/1-733 ---------- ---------P TTSSRPRPAQ SRRQAAATKR KYRASSEAPP 151 200 ENSP00000361232/1-851 AKRRNETSFL PAKKTSVKET QRTFKGNAQK MFSPKKHSVS TSDRNQEERQ ENSBTAP00000040521/1-736 AKRRSKASFL PAKKTAAKET RRTLKGKAQR TFSPKKPSAG ARDGDQERKP ENSTTRP00000013365/1-826 AKRRSEASFL PAKKTAAKET PRTFKGTAQK PFSPKRSSAG ARDGNPERKP bmy_05373T0/1-654 AKWRSETSFL PAKKTAAKET PRTFKGKAQK TFSPKRSSAG ASDGNQERKP BACU016191/1-733 AKRRSETSFL PAKKTTAKET PRSFKGKAQK TFYPKRSSGG ASDGNQERKP 201 250 ENSP00000361232/1-851 CIKTSSLFKN NPDIPELHRP VVKQVQEKVF TSAAFHELGL HPHLISTINT ENSBTAP00000040521/1-736 GAKTSSLFKN NPEIPELPRP VVKQVQEKVF TSDAFQALDL HPHLISTINT ENSTTRP00000013365/1-826 GIKTSSLFKN NPEIPELHRP VVKQVQEKVF TSDAFQALDL HPHLISTINT bmy_05373T0/1-654 GIKTSSLFKN NPEIPELHRP VVKQVQEKVF TSDAFQALDL HPHLISTINT BACU016191/1-733 GIKTSSLFRN NPEIPELHRP VVKQVQETVF TSDAFQALDL HPHLISTINT 251 300 ENSP00000361232/1-851 VLKMSSMTSV QKQSIPVLLE GRDALVRSQT GSGK-TLAYC --IPVVQSLQ ENSBTAP00000040521/1-736 VLKMSSMTSV QKQSIPVLLE GRDALVRSQT GSGK-TLAYC --IPVVQSLQ ENSTTRP00000013365/1-826 VLKMSSMTSV QKQSIPVLLE GRDALVRSQT GSGK-TLAYC --IPVVQSLQ bmy_05373T0/1-654 VLKMSSMTSV QKQSIPVLLE GRDALVRSQT GSGQLSFDFC PSSTVVCGRS BACU016191/1-733 VLKMSSMTSV QKQSIPVLLE GRDALVRSQT GSGK-TLAYC --IPVVQSLQ 301 350 ENSP00000361232/1-851 AM-----ESK IQRSDGPYAL VLVPTRELAL QSFDTVQKLL KPFTWIVPGV ENSBTAP00000040521/1-736 AM-----QSK IQRGDGPYAL ILVPTRELAL QSFDTVQKLL KPFTWIVPGV ENSTTRP00000013365/1-826 AM-----KSK IQRGDGPYAL ILVPTRELAL QSFDTVQKLL KPFTWIVPGV bmy_05373T0/1-654 AILCSPSSAT FQRGDGPYAL ILVPTRELAL QSFDTVQKLL KPFTWIVPGV BACU016191/1-733 AM-----KSK IQRGDGPYAL ILVPTRELAL QSFDTVQKLL KPFTWIVPGV 351 400 ENSP00000361232/1-851 LMGGEKRKSE KARLRKGINI LISTPGRLVD HIKSTKNIHF SRLRWLVFDE ENSBTAP00000040521/1-736 LMGGEKRKSE KARLRKGINI LISTPGRLVD HIKSTKNIHF RQIRWLILDE ENSTTRP00000013365/1-826 LMGGEKRKSE KARLRKGINI LIATPGRLVD HIKSTKNIHF RQIQWLILDE bmy_05373T0/1-654 LMGGEKRKSE KARLRKGINI LISTPGRLVD HIKSTKNIHF RRIQWLILDE BACU016191/1-733 LMGGEKRKSE KARLRKGINI LISTPGRLVD HIKSTKNIHF RRIQWLILDE 401 450 ENSP00000361232/1-851 ADRILDLGFE KDITVILNAV NAECQKRQNV LLSATLTEGV TRLADISLHD ENSBTAP00000040521/1-736 ADRILDLGFE KDLTVILNAV NAECQERQNV LLSATLTEGV ARLADISLHD ENSTTRP00000013365/1-826 ADRILDLGFE KDITVILNAL NAECQERQNV LLSATLTEGV TWLADISLHD bmy_05373T0/1-654 ADRILDLGFE KDITVILNAI NAECQERQNV LLSATLTEGV TWLADISLHD BACU016191/1-733 ADRILDLGFE KDITVILNAV NAECQERQNV LLSATLTEGV TWLADISLHD 451 500 ENSP00000361232/1-851 PVSISVLDKS HDQLNPKDKA VQEVCPPPAG DKLDSFAIPE SLKQHVTVVP ENSBTAP00000040521/1-736 PVSISVLDES HDVSSPESEA FLEASPPQAT DELDGFAIPA GLEQHVVVVP ENSTTRP00000013365/1-826 PVSISVLDES HDQSNPKSKA IPEAS-PQAS DELDSFAVPA SLEQYVTVVP bmy_05373T0/1-654 PVSISVLDES HDQSNPKSKA IPEASPPQAS DELDSFAIPA SLEQYVTVVP BACU016191/1-733 PVSVSVLDES HDQSNPKSKA IPEASPPRAS DELDSFAIPA SLEQYVTVVP 501 550 ENSP00000361232/1-851 SKLRLVCLAA FILQKCKFEE DQKMVVFFSS CELVEFHYSL FLQTLLSSSG ENSBTAP00000040521/1-736 SKLRLVCLAA FILQKCKFER DQKVIVFFSS CELVEFHYTL FLQTLLSGSG ENSTTRP00000013365/1-826 SKLRLVSLAG FILQKCKFER DQKLIIFFSS CELVDFHYNL FLQTLLSGSG bmy_05373T0/1-654 SKLRLVSLAG FILQKCKFER DQKMIIFFSS CELVDFHYNL FLQTLLSGSG BACU016191/1-733 SKLRLVSLAG FILQKCKFER DQKMIIFFSS CELVDFHYNL FLQTLLSGSG 551 600 ENSP00000361232/1-851 APASGQLPSA SMRLKFLRLH GGMEQEERTA VFQEFSHSRR GVLLCTDVAA ENSBTAP00000040521/1-736 ALAPEHLPST STPLKFLRLH SALEQEERTA VFQDFTHSKT GILFCTDIAA ENSTTRP00000013365/1-826 ALAPGALPCA STRLKFLRLH GDLEQEERTA VFQEFSHSKT GVLLCTDVAA bmy_05373T0/1-654 ALAPGGLPCA STRLKFLRLH GDLEQE---- ---------- ---------- BACU016191/1-733 ALAPGGLPCA STRLKFLRLH GNLEQEERTA VFQEFSRSKT GVLLCTDVAA 601 650 ENSP00000361232/1-851 RGLDLPQVTW IVQYNAPSSP AEYIHRIGRT ARIGCHGSSL LILAPSEAEY ENSBTAP00000040521/1-736 RGLDLPQVTW IVQYNAPSSP AEYIHRIGRT ARIGCHGSSL LVLAPSEAEY ENSTTRP00000013365/1-826 RGLDLPQVTW IVQYNAPSSP AEYIHRIGRT ARIGCHGSSL LILAPSEAEY bmy_05373T0/1-654 ---------- ---YNAPSSP AEYIHRIGRT ARIGCHGSSL LILAPSEAEY BACU016191/1-733 RGLDLPQVTW IVQYNAPSSP AEYIHRIGRT ARIGCHGSCL LILAPSEAEY 651 700 ENSP00000361232/1-851 VNSLASHKIN VSEIKMEDIL CVLTRDDCFK GKRWGAQKSH AVGPQEIRER ENSBTAP00000040521/1-736 VNSLASHKIN VSEVKMEDIL SVLTKDDCFK GRRGGSQKSR AAGPQEIRER ENSTTRP00000013365/1-826 VNSLASHKIN VSEIKMEDIL SVLTRDDCFK GRRWGSQKRR SVGPQEIRER bmy_05373T0/1-654 VNSLASHKIK SS---MQ--- ---------- -----TDKPR SVGPQEIRER BACU016191/1-733 VNSLASHKIN VSEIKMEDIL SVLTRDDCFK GRRWGSQKPR SVGPQEIRER 701 750 ENSP00000361232/1-851 ATVLQTVFED YVHSSERRVS WAKKALQSFI QAYATYPREL KHIFHVRSLH ENSBTAP00000040521/1-736 ATVLQTLFED YVHSSEETVS GAKKALQSFI RAYATYPREL KHIFHIRLLH ENSTTRP00000013365/1-826 ATVLQTVFED YVHSSERTVS GAKKALQSFI RAYATYPREL KHIFHIRSLH bmy_05373T0/1-654 ATVLQTVFED YVHSSERTLS GAKKALQSFI RAYATYPREL KHIFHVRSLH BACU016191/1-733 ATVLQTVFED YVHSSERTVS GAKKALQSFI RAYATYPREL KHIFHVRSLH 751 800 ENSP00000361232/1-851 LGHVAKSFGL RDAPRNLSAL TRKKRKAHVK RPDLHK-KTQ SKHSLAEILR ENSBTAP00000040521/1-736 LGHMAKSFGL RDAPKNLCAS AMKKKKANLK RPDLQRKKTQ SKQRLAEILR ENSTTRP00000013365/1-826 LGHVAKSFGL RDAPKNLSAL ATKKKKANLK RPDLHR-KTQ SKQRLAEILR bmy_05373T0/1-654 LGHVAKSFGL RDAPKNLSAL ATKKKKANLK RPDLHR-KTQ SKQRLAEILR BACU016191/1-733 LGHVAKSFGL RDAPKNLSAL ATKKKKANLK RPDLHR-KTQ SKQRLAEILR 801 850 ENSP00000361232/1-851 SEYSSGMEAD IAKVKKQNAP GEPGGRPLQH SLQPTPCFGR --GKTLKWRK ENSBTAP00000040521/1-736 SEYASGMETG GTKVRKQNTR GGPASQPRGA ARTPGPASAS AEGTD----- ENSTTRP00000013365/1-826 SEYSSGMETS VTKVREQNKR AGPGSRPQRR PK-PAPSLGR --GNKLKPKA bmy_05373T0/1-654 SEYSSGMEAS VTKVREQNRH AGPGSQPRSA VRNRRPALAV --GTN----- BACU016191/1-733 SEYSSGMEAS VTKVREQNKH AGPGSQPRGA VRNQRPALAV --GTN----- 851 900 ENSP00000361232/1-851 TQKGVQRDSK TSQKV ENSBTAP00000040521/1-736 ---------- ----- ENSTTRP00000013365/1-826 LRRDSETSQE VF--- bmy_05373T0/1-654 ---------- ----- BACU016191/1-733 ---------- -----