KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:41 2014 Check: 00 .. Name: ENSTTRP00000007309/1-514 Len: 672 Check: 3024 Weight: 1.00 Name: ENSP00000402297/1-546 Len: 672 Check: 6392 Weight: 1.00 Name: ENSBTAP00000040545/1-500 Len: 672 Check: 5411 Weight: 1.00 Name: bmy_04533T0/1-493 Len: 672 Check: 2289 Weight: 1.00 Name: BACU005761/1-657 Len: 672 Check: 7246 Weight: 1.00 // 1 50 ENSTTRP00000007309/1-514 ---------- ---------- ---------- ---------- ---------- ENSP00000402297/1-546 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040545/1-500 ---------- ---------- ---------- ---------- ---------- bmy_04533T0/1-493 ---------- ---------- ---------- ---------- ---------- BACU005761/1-657 MAWLISYKPA LFGFLFLLLL LSNWLVKYEL KLTPPEPQQP PGPLFAFTPL 51 100 ENSTTRP00000007309/1-514 ---------- ---------- ---------- ---------- ---------- ENSP00000402297/1-546 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040545/1-500 ---------- ---------- ---------- ---------- ---------- bmy_04533T0/1-493 ---------- ---------- ---------- ---------- ---------- BACU005761/1-657 TQFPVHRVSW AVELTPQGAG IFHAMERMKT QAGQQLSLLK VKKKWLFPAS 101 150 ENSTTRP00000007309/1-514 ---------- ---------- -----PGSLG PEVTSAPVRM CPQHPEPVPL ENSP00000402297/1-546 ---------- MTGCFLWQYH LPKLKTGSLG PEETSAPVRM CPRHPEPVPL ENSBTAP00000040545/1-500 ---------- ---------- ---------- ---------M CPQHPEPVPL bmy_04533T0/1-493 ---------- ---------- ---------- ---------- ---------- BACU005761/1-657 CSFFFVLSVL MTGCFLWQYY LPKLKTGSLG PEVTSAPVRM CPQHPEPVPL 151 200 ENSTTRP00000007309/1-514 AHPLPVLKEA LKKVDRILRQ ALSAPGLAAM SAVVIHNDTV LWTGNFGRKN ENSP00000402297/1-546 AHPLPVLKEA LEKVDQILRQ AMSAPGVAAM SAVVIHNDTV LWTGNFGKKN ENSBTAP00000040545/1-500 AHPLPVLKEA LEKVGRILRQ ALSAPGLAAM SAVVIHNDTV LWTGNFGKKN bmy_04533T0/1-493 ---------- ---------- ---------M SAVVIHNDTV LWTGNFGRKN BACU005761/1-657 AHPLPVLKEA LKKVDGILRQ ALSAPGLAAM SAVVIHNDTV LWTGNFGRKN 201 250 ENSTTRP00000007309/1-514 GSDPASGPPN EYTMYR---- ---------- -ISSISKIFP VLMLYRLWEE ENSP00000402297/1-546 GSDPASGAPN EYTMYR---- ---------- -ISSISKIFP VLMLYRLWEE ENSBTAP00000040545/1-500 GSDPASGPPN EYTMYR---- ---------- -ISSVSKIFP VLMLYRLWEE bmy_04533T0/1-493 GSDPASGPPN EYTMYRSAGA PPGSCGGGEG WISSISKIFP VLMLYRLWEE BACU005761/1-657 GSDPASGPPN EYTMYR---- ---------- -ISSISKIFP VLMLYRLWEE 251 300 ENSTTRP00000007309/1-514 GVXXXXXXXX XXXXXXXXXX XXXXXXXXXX XX-------- ---------X ENSP00000402297/1-546 GIVASLDDPL ERYASTFTIN NPLGLASAEQ QG-LMDGLEQ VGPAPRPSPV ENSBTAP00000040545/1-500 GIVASLDDPL ERYASAFTIN NPLGMASASQ QT-------- ---------V bmy_04533T0/1-493 GIVASLDDPL ERYAGTFTIN NPLGMASAPK QKSLMDGLEE VGPAPRPSPV BACU005761/1-657 GIVASLDDPL ERYAGTFTIN NPLGMASAPK QKSLMDVLEE VGPAPRPSPV 301 350 ENSTTRP00000007309/1-514 XXXXXXXXXX XLPRRLRSTS LLWRGSTQEA LNLLKDDVLV ADPGTRCHYS ENSP00000402297/1-546 TLRRMASQLS GLPRRLRSTS LLWKGSTQEA LNLLKDDVLV VDPGTRCHYS ENSBTAP00000040545/1-500 TLRRMASQLS GLPRRLRSTS LLWRGSTQEA LSLLKDDVLV ADPGTRCHYS bmy_04533T0/1-493 TLRRMASQLS GLPRRLRSTS LLWRGSTQEA LNLLKDDVLV ADPGTRCHYS BACU005761/1-657 TLRRMASQLS GLPRRLRSTS LLWRGSTQEA LNLLKDDVLV ADPGTRCHYS 351 400 ENSTTRP00000007309/1-514 TLAFSLLAHV LAAHTSQGDY QHWILENVLE PLGMEDTGFD LTPPVRARLA ENSP00000402297/1-546 TLAFSLLAHV LAAHTAQGDY QRWVSENVLE PLGMADTGFD LTPDVRARLA ENSBTAP00000040545/1-500 TLAFSLLAHV LAAHTVQGDY QRWILEKVLE PLGMADTGFD LTPPVRARLA bmy_04533T0/1-493 TLAFSLLAHV LAAHTAQGDY QHWILENVLE PLGMEDTGFD LTPPVRARLA BACU005761/1-657 TLAFSLLAHV LAAHTAQGDY QHWILENVLE PLGMEDTGFD LTPPVRARLA 401 450 ENSTTRP00000007309/1-514 AGFYGSGRPA PLYDLGWYRP SGQMYSTTSD LAKLAMVLLG SRPQRLLRPD ENSP00000402297/1-546 AGFYGSGRPA PLYDLGWYRP SGQMYSTAAD LAKLAVALLG GGPRRLLRPD ENSBTAP00000040545/1-500 VGFYGSGRLA PLYDLGWYRP SGQMYSTTAD LAKLAMVLLG GGPQRLLRPD bmy_04533T0/1-493 AGFYGSGRPA PLYDLGWYRP SGQMYSTTAD LAKLAMVLLG SRPQXLLRPD BACU005761/1-657 AGFYGSGRPA PLYDLGWYRP SGQMYSTTAD LAKLAMVLLG SRPQRLLRPD 451 500 ENSTTRP00000007309/1-514 AAKTLLAPLL ACPGAYFANE TGTPWEFHAQ RGYRVVRKDG DLDGYAATFS ENSP00000402297/1-546 AAKTLLAPLL ACPGAYFANE TGTPWEFHAQ RGYRVVRKDG DLDGYAATFS ENSBTAP00000040545/1-500 ASKTLLAPLL ACPGAYFANE TGTPWEFHAQ RGYRVVRKDG ELDGYAATFS bmy_04533T0/1-493 AAKTLLAPLL ACPGAYFANE TGTPWEFHVQ RGYRVVRKDG DLDGYAATFS BACU005761/1-657 TAKTLLAPLL ACPGAYFANE TGTPWEFHVQ RGYRVVRKDG DLDGYAATFS 501 550 ENSTTRP00000007309/1-514 LVPPLRLSLV LLLAGPRPPG PDLVAQVYDV LLPAMESALR EAALGPAPPP ENSP00000402297/1-546 LVPPLRLGLV LLLAGPRPPG PDLVARAYDE LLPALERALR EAEPGPAPPP ENSBTAP00000040545/1-500 LVPPLRLGLT LLLAGPRPPG PDLVAQAYDV LLPAMERALR GAELSPAPPP bmy_04533T0/1-493 LVPPLRLGLV LLLAGPRPPG PDLVAQAYDV LLPATERALR EAALSPAPPP BACU005761/1-657 LVPPLRLGLV LLLAGPRPPG PDLVAQAYDV LLPAMERALR EAALSPAPPP 551 600 ENSTTRP00000007309/1-514 SARPFTGYFT FANLTFYEVR AGPTGELRLR QFGPRVEALV PPAFRTLALR ENSP00000402297/1-546 TAHPFAGYFT FANLTFYEVR AGPAGELRLR QFGPRVEALV PPAFRTLALR ENSBTAP00000040545/1-500 STRPFTGYFT FSNLTFYDVR PGPAGELRLR QFGPRVEALV PAAFRTLTLR bmy_04533T0/1-493 SARPFAGYFT FANLTFYEVR AGPAGELRLR QFGPRVEALV PPAFRTLALR BACU005761/1-657 SARPFAGYFT FANLTFYEVR AGPAGELRLR QFGPRVEALV PPAFRTLALR 601 650 ENSTTRP00000007309/1-514 HLRGRVFQLY VAREFPCALP LGDSWLSLEA QHGQLVNFYP LDHHGLSPGF ENSP00000402297/1-546 HLHGRVFQLH VAHEFPCALP LGDAWLSLEA QHGQLVNFYP LDHHGLSPGF ENSBTAP00000040545/1-500 HVRGRVFQLH VAREFPCALP LGDSWLSLEA QHGQLVNFYP LDRHGLSPGF bmy_04533T0/1-493 HLRGRVFQLH VAREFPCALP LGDSWLSLEA QHGQLVNFYP LDHHGLSPGF BACU005761/1-657 HLRGRVFQLH VAREFPCVLP LGDSWLSLEA QHGQLVNFYP LDHHGLSPGF 651 700 ENSTTRP00000007309/1-514 DVPGLNTYRV MRLSHKPVFK T- ENSP00000402297/1-546 DVPGLNTYRV LRLRGKPVFK TQ ENSBTAP00000040545/1-500 DVPGLNTYRV LRLSHKPVFK T- bmy_04533T0/1-493 DVPGLNTYRV LRLSHKPVFK TQ BACU005761/1-657 DVPGLNTYRV LRLSHKPVFK TQ