KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:43 2014 Check: 00 .. Name: ENSTTRP00000012221/1-731 Len: 852 Check: 9456 Weight: 1.00 Name: ENSBTAP00000040586/1-710 Len: 852 Check: 8358 Weight: 1.00 Name: ENSP00000251038/1-736 Len: 852 Check: 6992 Weight: 1.00 Name: bmy_11893T0/1-437 Len: 852 Check: 2806 Weight: 1.00 Name: BACU013152/1-846 Len: 852 Check: 2476 Weight: 1.00 // 1 50 ENSTTRP00000012221/1-731 --MEIGT-EI SRKIRSAIKG KLQELGAYVD EELPDYIMVM VANKKSQDQM ENSBTAP00000040586/1-710 ---------- ---------- --------ID EELPDYIMVM VANKKSQDQM ENSP00000251038/1-736 --MEIGT-EI SRKIRSAIKG KLQELGAYVD EELPDYIMVM VANKKSQDQM bmy_11893T0/1-437 WLEPVGAGHA ERAAGSGGGG GGEAAGCGLG AGLR---LPV SGTLRGAEPT BACU013152/1-846 --MEIGT-EI SRKIRSAIKG KLQELGAYVD EELPDYIMVM VANKKSQDQM 51 100 ENSTTRP00000012221/1-731 TEDLSLFLGN NTIR-FTVWL HGVLDKLRSV TTDPSSLKSS DTNIFDSNVP ENSBTAP00000040586/1-710 TEDLSLFLGN NTIR-FTVWL HGVLDKLRSV TTDPASLKSS DTNLFDGNVP ENSP00000251038/1-736 TEDLSLFLGN NTIR-FTVWL HGVLDKLRSV TTEPSSLKSS DTNIFDSNVP bmy_11893T0/1-437 AGPGAMEIGT EISRKIRSAI KGKLQEL-GA YVDPSSLKSS DTNIFDSNVP BACU013152/1-846 TEDLSLFLGN NTIR-FTVWL HGVLDKLRSV TTDPSSLKSS DTNIFDSNVP 101 150 ENSTTRP00000012221/1-731 SNKSSFSRGD ERRHEAAVPP LAVSSTRPEK RESRVSTSSQ EQKATNVRQT ENSBTAP00000040586/1-710 SNKSSFSRGD ERRHEAAVPP LAVSSTRPEK RESRVSTSSQ EQKATNVRQT ENSP00000251038/1-736 SNKSNFSRGD ERRHEAAVPP LAIPSARPEK RDSRVSTSSQ ESKTTNVRQT bmy_11893T0/1-437 SNKSSFSRGD ERRHEAAVPP LAVSSTRPEK RESRVSTSSQ EQKATNVRQT BACU013152/1-846 SNKSSFSRGD ERRHEAAVPP LAVSSTRPEK RESRVSTSSQ EQKATNVRQT 151 200 ENSTTRP00000012221/1-731 YDDGAATRLM STVKPLREPA PSEDVIDIKP EPDDLIDEDL NFVQENPLSQ ENSBTAP00000040586/1-710 YDDGAATRLM STVKPLRELA PSEDVIDIKP EPDDLIDEDL NFVQENPLSQ ENSP00000251038/1-736 YDDGAATRLM STVKPLREPA PSEDVIDIKP EPDDLIDEDL NFVQENPLSQ bmy_11893T0/1-437 YDDGAATRLM STVKPLREPA PSEDVIDIKP EPDDLIDEDL NFVQENPLSQ BACU013152/1-846 YDDGAATRLM STVKPLREPA PSEDVIDIKP EPDDLIDEDL NFVQENPLSQ 201 250 ENSTTRP00000012221/1-731 KKPTVTLTYG SSRPSIEIYR PPASRNADSG A-HLNRLQFQ QQQNSIHAAK ENSBTAP00000040586/1-710 KKTTVTLTYG SSRPSIEIYR PPATRNTDSG A-HLNRLQFQ QQQNSIHAAK ENSP00000251038/1-736 KKPTVTLTYG SSRPSIEIYR PPASRNADSG V-HLNRLQFQ QQQNSIHAAK bmy_11893T0/1-437 KKPTVTLTYG SSHPSIEIYR PPASRNADSG GAHLNRLQFQ QQQNSIHAAK BACU013152/1-846 KKPTVTLTYG SSHPSIEIYR PPASRNADSG A-HLNRLQFQ QQQNSIHAAK 251 300 ENSTTRP00000012221/1-731 QLDIQTSRIY ETGRLCEPEV LNSLEETYSP FFRNSSEKMS IE-ENFR-RK ENSBTAP00000040586/1-710 QLDIQSSRVY ETGRLCEPEV LNSLEETYSP FFRSNAEKMS IEEENFRKRK ENSP00000251038/1-736 QLDMQSSWVY ETGRLCEPEV LNSLEETYSP FFRNNSEKMS MEDENFRKRK bmy_11893T0/1-437 QLNIQTSRIY ETGRLCEPEV LNSLEETYSP FFRNSSEKMS IEEENFRKRK BACU013152/1-846 QLDIQTSRIY ETGRLCEPEV LNSLEETYSP FFRNSSEKMS IEEENFRKRK 301 350 ENSTTRP00000012221/1-731 LP-VSSVVKV KKF-HDGEEE EXXXXX-XXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000040586/1-710 LPVVSSVVKV KKFSHDGEEE EEDDDCGSRT GSISSSVSVP AKPERRPSLP ENSP00000251038/1-736 LPVVSSVVKV KKFNHDGEEE EEDDDYGSRT GSISSSVSVP AKPERRPSLP bmy_11893T0/1-437 LPVVSSVVKV KKFSHDGEEE EEDDDCGSRT GSISSSVSVP AKPERRPSLP BACU013152/1-846 LPVVSSVVKV KKFSHDGEEE EEDDDCGSRT GSISSSVSVP AKPERRPSLP 351 400 ENSTTRP00000012221/1-731 XXXXXXXXXX XXXXSEAHES VTKTTTYSAL SQKQTLPVAP RTRTSQEELL ENSBTAP00000040586/1-710 PSKQANKNLI LKAISEAQES VTKTTNYSTV SQKQTLPVAP RTRTSQEDLL ENSP00000251038/1-736 PSKQANKNLI LKAISEAQES VTKTTNYSTV PQKQTLPVAP RTRTSQEELL bmy_11893T0/1-437 PSKQANKNLI LKAISEAQES VTKTTNYSAV SQKQTLPVAP RTRTSQEELL BACU013152/1-846 PSKQANKNLI LKAISEAQES VTKTTNYSAV SQKQTLPVAP RTRTSQEELL 401 450 ENSTTRP00000012221/1-731 AEMVQGQSRA PRMSSPIKEE ETKGDNIDKS Q--------- ---------- ENSBTAP00000040586/1-710 AEVAQGHGRV PRISSPVKEE EAQGGSVDER Q--------- ---------- ENSP00000251038/1-736 AEVVQGQSRT PRISPPIKEE ETKGDSVEKN Q--------- ---------- bmy_11893T0/1-437 AEMVQGQSRA PRISSPIKEE ETKGDNIDKS Q--------- ---------- BACU013152/1-846 AEMVQGQSRA PRISSPIKEE ETKGDNIDKS QVDLGSVTSS SCSLSELDNI 451 500 ENSTTRP00000012221/1-731 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040586/1-710 ---------- ---------- ---------- ---------- ---------- ENSP00000251038/1-736 ---------- ---------- ---------- ---------- ---------- bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 SQLLRKISTD ISEIKGMKAA ILTVEANLFD LNVRVSQNEA KISSLEVKMN 501 550 ENSTTRP00000012221/1-731 ---------- ---------- ---------- ---------- --GTQQRQLL ENSBTAP00000040586/1-710 ---------- ---------- ---------- ---------- --GTQQRQLL ENSP00000251038/1-736 ---------- ---------- ---------- ---------- --GTQQRQLL bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 EYSTLTSECN RQFEDLQEVV DFESQSRTTD VKVIGFLRNI EKGTQQRQLL 551 600 ENSTTRP00000012221/1-731 SRLQIDPVMA ETLQISQXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000040586/1-710 SRLQIDPVMA ETLQISQDYY DMESMVHADT RSFILKKPKL CEELVVAASQ ENSP00000251038/1-736 SRLQIDPVMA ETLQMSQDYY DMESMVHADT RSFILKKPKL SEEVVVAPNQ bmy_11893T0/1-437 ---------- ------VGIY EMLVIL---- ---------- ---------- BACU013152/1-846 SRLQIDPVMA ETLQISQDYY DMESMVHADT RSFILKKPKL SEEIVVAPNQ 601 650 ENSTTRP00000012221/1-731 XXXXXXXXXX XXXSGHLMQT RDLVQPDKPA SPKFIVTLDG VPSPPGYMSD ENSBTAP00000040586/1-710 ASGMETADAL RARSGHLVQT RDLVQPDKPA SPKFIVTLDG VPSPPGYMSD ENSP00000251038/1-736 ESGMKTADSL RVLSGHLMQT RDLVQPDKPA SPKFIVTLDG VPSPPGYMSD bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 ESGMKTADTL RVLSGHLMQT RDLVQPDKPA SPKFIVTLDG VPSPPGYMSD 651 700 ENSTTRP00000012221/1-731 QEEDMSFEGM RPAHHTAASH EGLAGLLHPQ QLHLLSRQLE DPDGSFTNAE ENSBTAP00000040586/1-710 QEEDMCSEGM RPAQHPAASH GGLAGLLHPQ RSRVLSRQLE DPDGSFANAE ENSP00000251038/1-736 QEEDMCFEGM KPVNQTAASN KGLRGLLHPQ QLHLLSRQLE DPNGSFSNAE bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 QEEDMCFEGM RPAHHTAASH EGLAGLLHPQ QLQLLSRQLE DPDGSFSNAE 701 750 ENSTTRP00000012221/1-731 MSELSVAQKP EKLLERCKYW PACKNGDECA YHHPVSPCKA FPNCKFAEKC ENSBTAP00000040586/1-710 MSELSVAQKP EKLLERCKYW PACKNGDECA YHHPVSPCKA FPNCKFAEKC ENSP00000251038/1-736 MSELSVAQKP EKLLERCKYW PACKNGDECA YHHPISPCKA FPNCKFAEKC bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 MSELSVAQKP EKLLERCKYW PACKHGDECA YHHPVSPCRA FPNCKFAEKC 751 800 ENSTTRP00000012221/1-731 LFVHPNCKYD AKCTKPECPF THMSRRIPVL PPKPAVTTPA PPSSSQLCRY ENSBTAP00000040586/1-710 LFVHPNCKYD AKCTKPDCPF THMSRRTPGL PPKP-VTAPA PPSSSQLCRY ENSP00000251038/1-736 LFVHPNCKYD AKCTKPDCPF THVSRRIPVL SPKPAVAPPA PPSSSQLCRY bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 LFVHPNCKYD AKCTKPECPF THMSRRIPVL PPKPAVTTPA PPSSSQLCRY 801 850 ENSTTRP00000012221/1-731 FPACKKMECP FYHPKHCRFN TQCTRPDCTF YHPTITVPPR HALKWIRPQT ENSBTAP00000040586/1-710 FPACKKMECP FYHPKHCRFN TQCTRPDCAF YHPTITVPPR HALKWIRPQT ENSP00000251038/1-736 FPACKKMECP FYHPKHCRFN TQCTRPDCTF YHPTINVPPR HALKWIRPQT bmy_11893T0/1-437 ---------- ---------- ---------- ---------- ---------- BACU013152/1-846 FPACKKMECP FYHPKHCRFN TQCTRPDCTF YHPTITVPPR HALKWIRPQT 851 900 ENSTTRP00000012221/1-731 SE ENSBTAP00000040586/1-710 SD ENSP00000251038/1-736 SE bmy_11893T0/1-437 -- BACU013152/1-846 R-