KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:45 2014 Check: 00 .. Name: ENSTTRP00000000704/1-307 Len: 442 Check: 8068 Weight: 1.00 Name: ENSP00000420716/1-440 Len: 442 Check: 5342 Weight: 1.00 Name: bmy_16023T0/1-241 Len: 442 Check: 1201 Weight: 1.00 Name: ENSBTAP00000040637/1-442 Len: 442 Check: 2337 Weight: 1.00 // 1 50 ENSTTRP00000000704/1-307 MTSIKEQAAI SRLLSFLQDW DNAGKVARSH ILNNFIETNQ GKTAPELEQE ENSP00000420716/1-440 MTSIKEQAAI SRLLSFLQEW DNAGKVARSH ILDKFIETNQ GKTAPELEQE bmy_16023T0/1-241 MTSVKEQAAI SRLLSFLQDW DNAGKVARSH ILNNFIETNQ GKTAPELEQE ENSBTAP00000040637/1-442 MTSIKEQAAI SRLLSFLQDW DNAGKVARSN ILNNFIEANQ GKTAPELEQE 51 100 ENSTTRP00000000704/1-307 FSQGASLFLV RLTTWLRLTX XXXXXXXXXX XXXXXXXXXX XXNRYLIEFL ENSP00000420716/1-440 FSQGASLFLV RLTTSLRITY MTDSCLEKLL RSIGIFLSAV SSNRYLIEFL bmy_16023T0/1-241 FSQGASLFLV RLTTWLRLTY MTGSRLDKLL RSIGIFLSAV SSNRYLVEFL ENSBTAP00000040637/1-442 FSQGASLFLV RLTTWLRLTY MTGSPLDKLL RSIGVFLSAV SSNRYLIEFL 101 150 ENSTTRP00000000704/1-307 EVGGALTLLE ILALKEIEEE DKKESIKLLQ VISNSGRKYK ELICESYXXX ENSP00000420716/1-440 EVGGVLTLLE ILGLEKIKEE AKKESVKLLQ VIANSGRTYK ELICESYGVR bmy_16023T0/1-241 EVGGALTLLE ILALKKIEEE DKKESIKLLQ VIANSGRKYK ELICESYGVR ENSBTAP00000040637/1-442 EVGGVLTLLE ILALNKIKEE DKKESIKLLQ VIANSGRKYK ELICESYGVR 151 200 ENSTTRP00000000704/1-307 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000420716/1-440 SIAEFLAKSK SEETQEEVQV LLDSLVHGNP KYQNQVYKGL IALLPCESPK bmy_16023T0/1-241 SIAEFLAKSK SEETQEEVQV LLDSLIHNNP KYQNQVYKGL IALLPCTSPK ENSBTAP00000040637/1-442 SIAEFLAKSK SEETQEEVQV LLDSLIHGNP KYQNQVYKGL IALLPCASPK 201 250 ENSTTRP00000000704/1-307 XXXXXXXXXX XXXSIIGTTH PGIVDCVLKV LRTVHPEVQY EAIELIKDLV ENSP00000420716/1-440 AQQLSLQTLR TAQPIIGTTH PSIVDCVLKV LGTMHLEVQY EAIELIKDLV bmy_16023T0/1-241 AQQLSLQTLR TAQSIIGTTH PGIVDGVLKV LCTMHLEVQY E--------- ENSBTAP00000040637/1-442 AQQLALQTLR TAQSIIGTTH PSIVDCVLKV LCTMHLEVQY EAIELIKDLV 251 300 ENSTTRP00000000704/1-307 NYDVCPALLK GLVALLIPSF KETSKQQSQI VSDSSVLQLS THLPWFLQQA ENSP00000420716/1-440 GYDVRQALLK GLVALLIPSV KEISKLQAKI LSDPSVLQLT PSLPMFLQQA bmy_16023T0/1-241 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040637/1-442 NYDVCPALLK GLVALLIPSF KETSKLQSQI VSDSSVLELT AHLPLFLQQA 301 350 ENSTTRP00000000704/1-307 AAANATG--- ---------- ---------- ---------- ---------- ENSP00000420716/1-440 AAAKAIGVLA RNDMSIAEEL LYLRVVRGLM AAMGNTDHSN SQRLASLTLE bmy_16023T0/1-241 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040637/1-442 AAAKAIGVLA RHNTTLAEEM LHLRVIHSLM AAMGNTDHSN SQRQASLTLE 351 400 ENSTTRP00000000704/1-307 ---------- ---------- ---------- ---------- ---------- ENSP00000420716/1-440 CFVQMFPLVA EHVRKCMGEE LYQLFLSNAE DLYMKIDSIQ ADILAANTVN bmy_16023T0/1-241 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040637/1-442 YFVQLFPVVE EHVRKTMGEE LYKLFLSNAE NLYMNIDSIQ ADILAANKVN 401 450 ENSTTRP00000000704/1-307 ---------- ---------- ---------- ---------- -- ENSP00000420716/1-440 VTKALCLHGS SYS-MNTLYG SRDSAQMAYL THF-EEDVES KE bmy_16023T0/1-241 ---------- ---------- ---------- ---------- -- ENSBTAP00000040637/1-442 VTRVLHLSGL SYSNMSFYFG HPNEDQVAYV THFRKEDVEE KE