KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:46 2014 Check: 00 .. Name: ENSP00000361569/1-404 Len: 410 Check: 3855 Weight: 1.00 Name: bmy_08592T0/1-403 Len: 410 Check: 5413 Weight: 1.00 Name: ENSBTAP00000040665/1-402 Len: 410 Check: 4950 Weight: 1.00 Name: BACU016229/1-95 Len: 410 Check: 5263 Weight: 1.00 // 1 50 ENSP00000361569/1-404 MECALDAQSL ISISLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE bmy_08592T0/1-403 MECALDAQSL ISISLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE ENSBTAP00000040665/1-402 MECALDAQSL ISISLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE BACU016229/1-95 MECALDAQSL ISISLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE 51 100 ENSP00000361569/1-404 RYAELYRR-- QQQQQQQQPP HHQHQHLAYA APGMPASAAD FGPLQLGGGG bmy_08592T0/1-403 RYAELYRR-- QQQQQQQQPP HHQHQHLAYA APGMPASAAD FGPLQLGGGG ENSBTAP00000040665/1-402 RYAELYRRQQ QQQQQQQQPP HHQHQHLAYA APGMPASAAD FGPLQLGGGG BACU016229/1-95 RYAELYRR-- QQQQQQQQPP HHQHQHLANM ---------- ---------- 101 150 ENSP00000361569/1-404 DAEAREPAAR HQLHQLHQLH QLHLQQQLHQ HQHPAPRGCA AAAAAGAPAG bmy_08592T0/1-403 DAEAREPVAR HQLHQLHQLH QLHLQQQLHQ HQHPAPRGC- AAAAAGAPAG ENSBTAP00000040665/1-402 DAEAREPVAR HQLHQLHQLH QLHLQQQL-- HQHPAPRGCA AAAAAGAPAG BACU016229/1-95 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000361569/1-404 GAGALSELPG CAALQPPHGA PHRGQPLEPL QPGPAPLPLP LPPPAPAALC bmy_08592T0/1-403 GAGALSELPG CAALQPPHGA PHRGQPLEPL QPGPA----P LPPPAPTALC ENSBTAP00000040665/1-402 GAGALSELPG CAALQPPHGA PHRGQPLEPL QPGPA----P LPPPA--SLC BACU016229/1-95 ---------- ---------- ---------- ---------P LPD------- 201 250 ENSP00000361569/1-404 PRDPRAPAAC ---SAPPGAA PPAA-AASPP ASPAPASSPG FYRGAYPTPS bmy_08592T0/1-403 PRDPRASAAC SAPSAPPGAA PQAATAASPP ASPAPASSPG FYRGAYPAPS ENSBTAP00000040665/1-402 PRDPRASAAC SAPSAPPGAA PQAAAAASPP SSPAPASSPG FYRGAYPAPS BACU016229/1-95 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000361569/1-404 DFGLHCSSQT TVLDLDTHVV TTVENGYLHQ DCCASAHCPC CGQGAPGPGL bmy_08592T0/1-403 DFGVHCSSQT TVLDLDTHVV TTVENGYLHQ DCCASAHCPC CGQGAPGPGL ENSBTAP00000040665/1-402 DFGVHCSSQT TVLDLDTHVV TTVENGYLHQ DCCASAHCPC CGQGAPGPGL BACU016229/1-95 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000361569/1-404 ASAAGCKRKY YPGQEEEEDD EEDAGGLGAE PPGGAPFAPC KRARFEDFCP bmy_08592T0/1-403 ASAAGCKRKY YPGQEEEDDD EEDAGDLGAE PPGGVPFAPC KRARFEDFCP ENSBTAP00000040665/1-402 ASATGCKRKY YPGQEEEDDD DEDAGDLGAE PPGGVPFAPC KRARFEDFCP BACU016229/1-95 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000361569/1-404 DSSPDASNIS NLISIFGSGF SGLVSRQPDS SEQPPPLNGQ LCAKQALASL bmy_08592T0/1-403 DSSPDASNIS NLISIFGSGF SGLVSRQPDS SEQPPPLNGQ LCAKQALASL ENSBTAP00000040665/1-402 DSSPDASNIS NLISIFGSGF SGLVSRQPDS SEQPPPLNGQ LCAKQALASL BACU016229/1-95 ---------- --ILVFGDLL ---------- ---PSALE-- ---------- 401 450 ENSP00000361569/1-404 GAWTRAIVAF bmy_08592T0/1-403 GAWTRAIVAF ENSBTAP00000040665/1-402 GAWTRAIVAF BACU016229/1-95 ----------