KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:50:47 2014 Check: 00 .. Name: ENSP00000167106/1-365 Len: 422 Check: 155 Weight: 1.00 Name: bmy_03502T0/1-328 Len: 422 Check: 4336 Weight: 1.00 Name: BACU010834/1-403 Len: 422 Check: 9986 Weight: 1.00 Name: ENSTTRP00000012535/1-363 Len: 422 Check: 5196 Weight: 1.00 Name: ENSBTAP00000040667/1-363 Len: 422 Check: 6098 Weight: 1.00 // 1 50 ENSP00000167106/1-365 ---------- ---------- ---------- ---------- ---------M bmy_03502T0/1-328 ---------- ---------- ---------- ---------- ---------M BACU010834/1-403 MLQPVQGGDP VAAARRSVTL RPARAFPAEP RARERNPRPT MARLAQDLGM ENSTTRP00000012535/1-363 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000040667/1-363 ---------- ---------- ---------- ---------- ---------M 51 100 ENSP00000167106/1-365 PGGKKVAGGG SSGATPTSAA ATAPSGVRRL ETSEGTSAQR DEEPEEEGEE bmy_03502T0/1-328 PGGKKVVGGG SSGAAPTAAA --VPSGARRL ETSEGASAQR DDEPEEEGEE BACU010834/1-403 PGGKKVVGGG GSGAAPTAAA --VPSGARRL ETSEGASAQR DDEPEEEGEE ENSTTRP00000012535/1-363 PGGKKVVGGG SSGAAPTAAA --VPSGARRL ETSEGASAQR DDEPEEEGEE ENSBTAP00000040667/1-363 PGGKKVVGGG STGAAPTAAA --VPSGVRRL ETSEGASAQR DDEPEEEGEE 101 150 ENSP00000167106/1-365 DLRDGGVPFF VNRGGLPVDE ATWERMWKHV AKIHPDGEKV AQRIRGATDL bmy_03502T0/1-328 DLRDGGIPFF INRGGLPVDE ATWERMWKHV AKIHPDGEKV AQRIRGAMDL BACU010834/1-403 DLRDGGIPFF INRGGLPVDE ATWERMWKHV AKIHPDGEKV AQRIRGAMDL ENSTTRP00000012535/1-363 DLRDGGIPFF INRGGLPVDE ATWERMWKHV AKIHPDGEKV AQRIRGAMDL ENSBTAP00000040667/1-363 DLRDGGIPFF VNRGGLPVDE PTWERMWKHV AKIHPDGEKV AQRIRGATDL 151 200 ENSP00000167106/1-365 PKIPIPSVPT FQPSTPVPER LEAVQRYIRE LQYNHTGTQF FEIKKSRPLT bmy_03502T0/1-328 PKIPIPSVPT FQPSTPVPER LEAVQRYIRE LQ-------- ---------- BACU010834/1-403 PKIPIPSVPT FQPSTPVPER LEAVQRYIRE LQY------- ------PPW- ENSTTRP00000012535/1-363 PKIPIPSVPT FQPSTPVPER LEAVQRYIRE LQYNHTGTQF FEIKKSRPLT ENSBTAP00000040667/1-363 PKIPIPSVPT FQPSTPVPER LEAVQRYIRE LQYNHTGTQF FEIKKSRPLT 201 250 ENSP00000167106/1-365 GLMDLAKEMT KEALPIKCLE AVILGI---- ----YLTNSM PTLERFPISF bmy_03502T0/1-328 -LMDLAKEMT KEALPIKCLE AVILGMYPSS ERPSYLTNSM PTLERFPISF BACU010834/1-403 -LMDLAKEMT KEALPIKCLE AVILGIWGGA --ASYLTNSM PTLERFPISF ENSTTRP00000012535/1-363 GLMDLAKEMT KEALPIKCLE AVILGI---- ----YLTNSM PTLERFPISF ENSBTAP00000040667/1-363 GLMDLAKEMT KEALPIKCLE AVILGI---- ----YLTNSM PTLERFPISF 251 300 ENSP00000167106/1-365 KTYFSGNYFR HIVLGVNFAG RYGALGMSRR EDLMYKPPAF RTLSELVLDF bmy_03502T0/1-328 KTYFSGNYFR HIVLGVNFGG RYGALGMSRR EDLMYKPPAF RTLSELVLDY BACU010834/1-403 KTYFSGNYFR HIVLGVNFGG RYGALGMSRR EDLMYKPPAF RTLSELVLDY ENSTTRP00000012535/1-363 KTYFSGNYFR HIVLGVNFGG RYGALGMSRR EDLMYKPPAF RTLSELVLDY ENSBTAP00000040667/1-363 KTYFSGNYFR HIVLGVNFGG RYGALGMSRR EDLMYKPPAF RTLSELVLDY 301 350 ENSP00000167106/1-365 EAAYGRCWHV LKKVKLGQSV SHDPHSVEQI EWKHSVLDVE RLGRDDFRKE bmy_03502T0/1-328 EAAYSRCWHV LKKVKLGQCV SHDPHSVEQI EWKHSVLDVE RLGREDFRKE BACU010834/1-403 EAAYSRCWHV LKKVKLGQCV SHDPHSVEQI EWKHSVLDVE KLGPEDFRKE ENSTTRP00000012535/1-363 EAAYSRCWHV LKKVKLGQCV SHDPHSVEQI EWKHSVLDVE RLGREDFRKE ENSBTAP00000040667/1-363 EAAYGRCWHV LKKVKLGQCV SHDPHSVEQI EWKHSVLDVE RLGREDFRKE 351 400 ENSP00000167106/1-365 LERHARDMRL KIGKGTGPPS PTKDRKKDVS SPQRAQSSPH RRNSRSERRP bmy_03502T0/1-328 LERHARDMRL KV-------- ------RVCG RPARERPGA- ---------P BACU010834/1-403 LERHARDMRL KIGKGTGPPS PTKDRKKDVS SPQRGQSSPH RRNSRSERRP ENSTTRP00000012535/1-363 LERHARDMRL KIGKGTGPPS PTKDRKKDVS SPQRGQSSPH RRNSRSERRP ENSBTAP00000040667/1-363 LERHARDMRL KIGKGTGPPS PTKDRKKDVS SPQRGQSSPH RRNSRSERRP 401 450 ENSP00000167106/1-365 SGDKKTSEPK AMPDLNGYQI RV bmy_03502T0/1-328 SGEKKPSEPK AMPDLNGYQI RV BACU010834/1-403 SGEKKPSEPK AMPDLNGYQI RV ENSTTRP00000012535/1-363 SGEKKPSEPK AMPDLNGYQI RV ENSBTAP00000040667/1-363 SGEKKPSEPK AMPDLNGYQI RV