KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:50:47 2014  Check: 00 ..

 Name: BACU018311/1-197          Len:    207  Check:  6016  Weight:  1.00
 Name: ENSBTAP00000040675/1-201  Len:    207  Check:  3320  Weight:  1.00
 Name: bmy_06396T0/1-183         Len:    207  Check:  3854  Weight:  1.00
 Name: ENSP00000221459/1-207     Len:    207  Check:  8837  Weight:  1.00
 Name: ENSTTRP00000016208/1-207  Len:    207  Check:  8837  Weight:  1.00

//


                          1                                                   50
BACU018311/1-197          -LCVCVPRPR PADVSRAVEL LERLQRSGEL PPQKLQALQR VLQSRFCSAI 
ENSBTAP00000040675/1-201  MAALVEPLGL EREVSRAVEL LERLQRSGEL PPQKLQALQR VLQSRFCSAI 
bmy_06396T0/1-183         MAALVEPLGL ERDVSRAVEL LERLQRSGEL PPQKLQALQR VLQSRFCSAI 
ENSP00000221459/1-207     MAALVEPLGL ERDVSRAVEL LERLQRSGEL PPQKLQALQR VLQSRFCSAI 
ENSTTRP00000016208/1-207  MAALVEPLGL ERDVSRAVEL LERLQRSGEL PPQKLQALQR VLQSRFCSAI 


                          51                                                 100
BACU018311/1-197          REVYEQLYDT LDITGSAEIR AHATAKATVA AFTASEGHAH PRVVELPKTD 
ENSBTAP00000040675/1-201  REVYEQLYDT LDITGSAEIR AHATAKATVA AFTASEGHAH PRVVELPKTD 
bmy_06396T0/1-183         RE-------- ---------- ------ATVA AFTASEGHAH PRVVELPKTD 
ENSP00000221459/1-207     REVYEQLYDT LDITGSAEIR AHATAKATVA AFTASEGHAH PRVVELPKTD 
ENSTTRP00000016208/1-207  REVYEQLYDT LDITGSAEIR AHATAKATVA AFTASEGHAH PRVVELPKTD 


                          101                                                150
BACU018311/1-197          EGLGFNIMGG KEQNSPIYIS RVIPGGVADR HGGLKRGDQL LSVNGVSVEG 
ENSBTAP00000040675/1-201  EGLGFNIMGG KEQNSPIYIS RVIPGGVADR HGGLKRGDQL LSVNGVSVEG 
bmy_06396T0/1-183         EGLGFNIMGG KEQNSPIYIS RVIPGGVADR HGGLKRGDQL LSVNGVSVEG 
ENSP00000221459/1-207     EGLGFNIMGG KEQNSPIYIS RVIPGGVADR HGGLKRGDQL LSVNGVSVEG 
ENSTTRP00000016208/1-207  EGLGFNIMGG KEQNSPIYIS RVIPGGVADR HGGLKRGDQL LSVNGVSVEG 


                          151                                                200
BACU018311/1-197          EQHEKAVELL KAAQGSVKLV VRYTPRVLEE MEARFEKMRS ARRRQQHQ-- 
ENSBTAP00000040675/1-201  EQHEKAVELL KAAQGSVKLV VRYTPRVLEE MEARFEKMRS ARRRQQHQSY 
bmy_06396T0/1-183         EQHEKAVELL KAAQGSVKLV VRYTPRVLEE MEARFEKMRS ARRRQQHQSY 
ENSP00000221459/1-207     EQHEKAVELL KAAQGSVKLV VRYTPRVLEE MEARFEKMRS ARRRQQHQSY 
ENSTTRP00000016208/1-207  EQHEKAVELL KAAQGSVKLV VRYTPRVLEE MEARFEKMRS ARRRQQHQSY 


                          201                                                250
BACU018311/1-197          ------- 
ENSBTAP00000040675/1-201  S------ 
bmy_06396T0/1-183         SSLESRG 
ENSP00000221459/1-207     SSLESRG 
ENSTTRP00000016208/1-207  SSLESRG