KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:47 2014 Check: 00 .. Name: ENSBTAP00000040689/1-171 Len: 388 Check: 6458 Weight: 1.00 Name: ENSP00000363139/1-173 Len: 388 Check: 2240 Weight: 1.00 Name: bmy_01996T0/1-174 Len: 388 Check: 5842 Weight: 1.00 Name: BACU003244/1-387 Len: 388 Check: 2614 Weight: 1.00 // 1 50 ENSBTAP00000040689/1-171 MAAPGPRALR AALCGGCCCL LLCAQLAVAG KGARGFGRGA LLRVNIWPAV ENSP00000363139/1-173 MEAPGPRALR TALCGGCCCL LLCAQLAVAG KGARGFGRGA LIRLNIWPAV bmy_01996T0/1-174 MAAPGPRALR AALCGGCCCL LLCAQLAVAG KGARGFGRGA LLRMNVWPAV BACU003244/1-387 MAAPGPRALR AALCGGCCCL LLCAQLAVAG KGARGFGRGA LLRMNIWPAV 51 100 ENSBTAP00000040689/1-171 RVACKQLKPC EHCVEGNRAH NLSSCVWEQC RPEEPGHCVA QSEVVKEGCS ENSP00000363139/1-173 QGACKQLEVC EHCVEGDRAR NLSSCMWEQC RPEEPGHCVA QSEVVKEGCS bmy_01996T0/1-174 RGACKQLKLC EHCVEGNRAH NLSGCVWEQC QPEEPGHCVA QAEVVKEGCS BACU003244/1-387 RGACKQLKLC EHCVEGNRAH NLSGCVWKQC QPEEPGHCVA QAEVVKEGCS 101 150 ENSBTAP00000040689/1-171 IYNRSESCPA VHHHPTHEPK TVTTGQRQHL PDTMRASFN- ---------- ENSP00000363139/1-173 IYNRSEACPA AHHHPTYEPK TVTTGS-PPV PEAHSPGFDG ASFIGGVVLV bmy_01996T0/1-174 VYNRSESCPA VHHHPTYEPK TITTES-PSV PEAHGPGFDG ASFIGGVVLV BACU003244/1-387 VYNRSESCPA VHHHPTYEPK TITTES-PSV PEAHGPGFDG ASFIGGVVLV 151 200 ENSBTAP00000040689/1-171 ------HLLP HRHPCGPPPG TRSGPGLFPW TRLGHCPQ-- ---------- ENSP00000363139/1-173 LSLQAVAFFV LHFLKAKDST YQTL------ ---------- ---------- bmy_01996T0/1-174 LSLQTVAFFV LRFLKAKDST YQTLI----- ---------- ---------- BACU003244/1-387 LSLQTVAFFV LRFLKAKDST YQTLSLLAPN PGCPSCPETR ELEASKVVLL 201 250 ENSBTAP00000040689/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000363139/1-173 ---------- ---------- ---------- ---------- ---------- bmy_01996T0/1-174 ---------- ---------- ---------- ---------- ---------- BACU003244/1-387 PSCPGAPGSP GEKGAPGPRG QLGPPCKMGP KGEPGPRSCQ ELLSRDATLS 251 300 ENSBTAP00000040689/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000363139/1-173 ---------- ---------- ---------- ---------- ---------- bmy_01996T0/1-174 ---------- ---------- ---------- ---------- ---------- BACU003244/1-387 GWYHLCLPEG RALPVFCDVD TTEGGWLVST WELRVELEDF KGNCTFAHCG 301 350 ENSBTAP00000040689/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000363139/1-173 ---------- ---------- ---------- ---------- ---------- bmy_01996T0/1-174 ---------- ---------- ---------- ---------- ---------- BACU003244/1-387 AFHLLGDAGD SLSFHSRKPF TTYDTNHDTS KSNCEVTVRG AWYFRSCYQS 351 400 ENSBTAP00000040689/1-171 ---------- ---------- ---------- -------- ENSP00000363139/1-173 ---------- ---------- ---------- -------- bmy_01996T0/1-174 ---------- ---------- ---------- -------- BACU003244/1-387 NLDGRHWMSE ATAHNYGIDW ASGCGMGHPY HRVHIMLC